KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:44 2014 Check: 00 .. Name: ENSP00000206423/1-950 Len: 994 Check: 2606 Weight: 1.00 Name: ENSBTAP00000014293/1-954 Len: 994 Check: 5826 Weight: 1.00 Name: ENSTTRP00000004113/1-948 Len: 994 Check: 3267 Weight: 1.00 Name: bmy_09357T0/1-991 Len: 994 Check: 5417 Weight: 1.00 Name: BACU009336/1-991 Len: 994 Check: 4240 Weight: 1.00 // 1 50 ENSP00000206423/1-950 MTWRMGPRFT MLLAMWLVCG SEPHPHATIR GSHGGRKVPL VSPDSSRPAR ENSBTAP00000014293/1-954 MTWRMGPSFT MLLALWLVCG SEPHGQTMNR GSRGGQKVPL VSAVNRRPAR ENSTTRP00000004113/1-948 MTWRMGPSFT MLLALWLVCG SEPHAHAMNR GSRGGQKAPP VSPVNRRPAR bmy_09357T0/1-991 MTWRMGPSFT MLLALWLVCG SEPHAHAMNR GSHGGQKAPP VSPVNRRPAR BACU009336/1-991 MTWRMGPSFT MLLALWLVCG SEPHAHAMNR GSHGGQKAPP VSPVNRRPAR 51 100 ENSP00000206423/1-950 FLRHTGRSRG IERSTLEEPN LQPLQRRRSV PVLRLARPTE PPARSDINGA ENSBTAP00000014293/1-954 LLRHTGRSQG IERTTLEKPN LQPLQRRRSI PVLRVAHATA PPASLGIHGA ENSTTRP00000004113/1-948 LLRHTGRSQG IERTTPEEPN LQPLQRRRSI PVLRVAHATA PSASLGIHGA bmy_09357T0/1-991 LLRHTGRSQG IERTTPEEAN LQPLQRRRSV PVLRVAHATA PSASLGIHGA BACU009336/1-991 LLRHTGRSQG IERTTPEEAN RQPLQRRRSV PVLRVAHATA PSASLGIHGA 101 150 ENSP00000206423/1-950 AVRPEQRPAA RGSPREMIRD EGSSARSRML RFPSGSSSPN ILASFAGKNR ENSBTAP00000014293/1-954 PVRTQQSPGA RSSPREMVRD EGSSARSKML RFPSGSSSPN ILASFAGKNR ENSTTRP00000004113/1-948 PVRTERRPAA RSSPREMVRD EGSSARSRML RFPSGSSSPN ILASFAGKNR bmy_09357T0/1-991 PVRTERRPAA RSSPREMVRD EGSSARSRML RFPSGSSSPN ILASFAGKNR BACU009336/1-991 PVRTERRPAA RSPPREMVRD EGSSARSRML RFPSGSSSPN ILASFAGKNR 151 200 ENSP00000206423/1-950 VWVISAPHAS EGYYRLMMSL LKDDVYCELA ERHIQQIVLF HQAGEEGGKV ENSBTAP00000014293/1-954 VWVISAPHAS EGYYRLMMSL LKDDVYCELA ERHIQQIVLF HQAGEEGGKV ENSTTRP00000004113/1-948 VWVISAPHAS EGYYRLMMSL LKDDVYCELA ERHIQQIVLF HQAGEEGGKV bmy_09357T0/1-991 VWVISAPHAS EGYYRLMMSL LKDDVYCELA ERHIQQIVLF HQAGEEGGKV BACU009336/1-991 VWVISAPHAS EGYYRLMMSL LKDDVYCELA ERHIQQIVLF HQAGEEGGKV 201 250 ENSP00000206423/1-950 RRITSEGQIL EQPLDPSLIP KLMSFLKLEK GKFGMVLLKK TLQVEERYPY ENSBTAP00000014293/1-954 RRITSEGRVL EQPLDPSLIP KLMSFLKLEK GKFGMVLLKK TLQVEERYPY ENSTTRP00000004113/1-948 RRITTEGRVL EQPLDPSLIP KLMSFLKLEK GKFGMVLLKK TLQVEERYPY bmy_09357T0/1-991 RRITAEGRVL EQPLDPSLIP KLMSFLKLEK GKFGMVLLKK TLQVEERYPY BACU009336/1-991 RRITAEGRVL EQRLDPSLIP KLMSFLKLEK GKFGMVLLKK TLQVEERYPY 251 300 ENSP00000206423/1-950 PVRLEAMYEV IDQGPIRRIE KIRQKGFVQK CKASGVEGQV VAEGNDGGGG ENSBTAP00000014293/1-954 PVRLEAMYEI IDQGPIRRIE KIRQKGFVQK CKASGVEGQV VEEGNN-GGE ENSTTRP00000004113/1-948 PVRLEAMYEI IDQGPIRRIE KIRQKGFVQK CKASGVEGQV VEEGND-GRE bmy_09357T0/1-991 PVRLEAMYEI IDQGPIRRIE KIRQKGFVQK CKASGVEGQV VEEGND-GGE BACU009336/1-991 PVRLEAMYEI IDQGPIRRIE KIRQKGFVQK CKASGVEGQV VEEGND-GGE 301 350 ENSP00000206423/1-950 AGRPSLGSEK KKEDPRRAQV PPTRESRVKV LRKLAATAPA LPQPPSTPRA ENSBTAP00000014293/1-954 AGRPGLGSEK RKEEQRRAQV PPTRESRVKV MRKPATTVGA PPPPPPTPRA ENSTTRP00000004113/1-948 AGRPGLSSEK RKEEQRRAQV LPTRESRLKA VRKAATAAGA PPPPPTTPRA bmy_09357T0/1-991 AGRPGLSSEK RKGEQRRAQV LPTRESRLKV MRKPATAAGA PPPPPTTPRA BACU009336/1-991 AGRPGLSSEK RKGEQRRAQV LPTRESRLKV MRKPATAAGA PPPPPTTPRA 351 400 ENSP00000206423/1-950 TTLPPAPATT VTRSTSRAVT VAARPMTTTA FPTTQRPWTP -----SPSHR ENSBTAP00000014293/1-954 TTLPPAPVTT VTRATSRVVT AAARPTTTTA FPTTQRPWTP RVHLSSAPHR ENSTTRP00000004113/1-948 TTLPPAAATA VTRATYRPVT VTARPTTPVG FPTTQRPWTP -----PPSHR bmy_09357T0/1-991 TTLPPAAATA VTRATSPVVT VTAKPTTPMG FPTTQRPWTP RVHPSSEPHR BACU009336/1-991 TTLPPAAVTA VTRATSRVVT VTARPTTPMG FPITQRPWTP RVHPSSEPHR 401 450 ENSP00000206423/1-950 PPTTTEVITA RRPSVSENLY PPSRKDQHRE RPQTTRRPSK ATSLESFTNA ENSBTAP00000014293/1-954 PPATAEVTTA KGPVASENLY PPPRKEQPRE RPLTTRRPSK ATSFEVFTAA ENSTTRP00000004113/1-948 ASATAEVATA RGPVASKNLY PPPRKEQPRE RPQTARRPSK ATSFERFTAA bmy_09357T0/1-991 ASATAEVATA RGPVASKNLY PPPRKEQPRE RPQTARRPSK ATSFERFTAA BACU009336/1-991 ASATAEVATA RGSVASKNIY PPPRKEPPRE RPQTARRPGK ATSFERFTAA 451 500 ENSP00000206423/1-950 PPTTISEPST RAAGPGRFRD NRMDRREHGH RDPNVVPGPP KPAKEKPPKK ENSBTAP00000014293/1-954 PSIAISEPST RA-GAGRFRD NRTDRREHGP RDPNVVPSSH KPAKGKPPKK ENSTTRP00000004113/1-948 PPTTVSEPST GA-GAGRFQD NRTDRWEHGP RDPNVGPGPH KPAKGKPPQK bmy_09357T0/1-991 PPTTVSEPRT RA-GAGRFQD NRTDRWEHGP RDPNVGPGPH KPAKGKPPQK BACU009336/1-991 PPTTVSEPRT RA-GAGRFQD NHTDRWEHGP RDPNVGPGPH KPAKGKPPQK 501 550 ENSP00000206423/1-950 KAQDKILSNE YEEKYDLSRP TASQLEDELQ VGNVPLKKAK ESKKHEKLEK ENSBTAP00000014293/1-954 KAQDKILSNE YEDKYDLSRP TTSQLEEELQ RGNMPPKKAK ESKKHEKLEK ENSTTRP00000004113/1-948 KARDKILSNE YEGKYDLSRP TASQLEEELQ VGNVAPKKAK ESKKHEKLEK bmy_09357T0/1-991 KARDKILSNE YEGKYDLSRP TASQLEEELQ VGNVAPKKAK ESKKHEKLEK BACU009336/1-991 KARDKILSNE YEGKYDLSRP TASQLEEELQ VGNVAPKKAK ESKKHEKLEK 551 600 ENSP00000206423/1-950 PEKEKKKKMK NENADKLLKS EKQMK--KSE KKSKQEKEKS KKKKGGKTEQ ENSBTAP00000014293/1-954 PEKEKKKKVK SEKADKLLKS EKQVKKDKAE KKSRQEKEKN KKKKVGRTEQ ENSTTRP00000004113/1-948 PEKEKKKRVK SEKADKLLKS EKQVKKDKAE KKSRQEKEKN KKKKAGRTEK bmy_09357T0/1-991 PEKEKKKRVK SEKADKLLKS EKQVKKDKAE KKSRQEKEKN KKKKAGRTEQ BACU009336/1-991 PEKEKKKRVK SEKADKLLKS EKQVKKDKAE KKSRQEKEKN KKKKAGRTEQ 601 650 ENSP00000206423/1-950 DGYQKPTNKH FTQSPKKSVA DLLGSFEGKR RLLLITAPKA ENNMYVQQRD ENSBTAP00000014293/1-954 DGHLKPA-KP FTQNPRKLVT DLLGPFEGKR RLLLITAPKA ENSMYVQQRD ENSTTRP00000004113/1-948 DGHLKPT-KH FAQSPRKSVT DLLGPLEGKR RLLLITAPKA ENNMYVQQRD bmy_09357T0/1-991 DGHLKPT-KH FTQSPRKSVT DLLGPLEGKR RLLLITSPKA ENNMYVQQRD BACU009336/1-991 DGHLKPA-KH FTQSPRKSVT DLLGPLEGKR RLLLITAPKA ENNMYVQQRD 651 700 ENSP00000206423/1-950 EYLESFCKMA TRKISVITIF GPVNNSTMKI DHFQ------ ---------- ENSBTAP00000014293/1-954 EYLESFCKMA TRKVSVITIF GPVSNSTMKI DHFQ------ ---------- ENSTTRP00000004113/1-948 EYLESFCKMA TRKVSVITIF GPVNNSTMKI DHFQ------ ---------- bmy_09357T0/1-991 EYLESFCKMA TRKVSVITIF GPVNNSTMKI DHFQLGSLKH FIIFLLFSQL BACU009336/1-991 EYLESFCKMA TRKVSVITIF GPVNNSTMKI DHFQLGSLKH FIIFLLFSQL 701 750 ENSP00000206423/1-950 ---------- ---------- -LDNEKPMRV VDDEDLVDQR LISELRKEYG ENSBTAP00000014293/1-954 ---------- ---------- -LDNEKPMRV VDDEDLVDQH LISELRKEYG ENSTTRP00000004113/1-948 ---------- ---------- -LDNEKPMRV VDDEDLVDQH LISELRKEYG bmy_09357T0/1-991 SGDYARQLPS LDPATLCREA RLDNEKPMRV VDDEDLVDQH LISELRKEYG BACU009336/1-991 SGDYARQLPS LDPATLCRET RLDNEKPMRV VDDEDLLDQH LISELRKEYG 751 800 ENSP00000206423/1-950 MTYNDFFMVL TDVDLRVKQY YEVPITMKSV FDLIDTFQSR IKDMEKQKKE ENSBTAP00000014293/1-954 MTYNDFFMVL TDVDLRVKQY YEVPIAMKSV FDLIDTFQSR IKDMEKQKKD ENSTTRP00000004113/1-948 MTYNDFFMVL TDVDLRVKQY YEVPIAMKSV FDVIDTFQSR I-DMEKQKKE bmy_09357T0/1-991 MTYNDFFMVL TDVDMRVKQY YEVPIAMKSV FDVIDTFQSR IKDMEKQKKE BACU009336/1-991 MTYNDFFMVL TDVDMRVKQY YEVPIAMKSV FDVIDTFQSR IKDMEKQKKE 801 850 ENSP00000206423/1-950 GIVCKEDKKQ SLENFLSRFR WRRRLLVISA PNDEDWAYSQ QLSALSGQAC ENSBTAP00000014293/1-954 GIICKEDKKQ SLENFLSRFR WRRRLLVISA PNDEDWAYSQ QLSALSGQAC ENSTTRP00000004113/1-948 GIVCKEDKKQ SLENFLSRFR WRRRLLVISA PNDEDWAYSQ QLSALSGQAC bmy_09357T0/1-991 GIVCKEDKKQ SLENFLSRFR WRRRLLVISA PNDEDWAYSQ QLSALSGQAC BACU009336/1-991 GIVCKEDKKQ SLENFLSRFR WRRRLLVISA PNDEDWAYSQ QLSALSGQAC 851 900 ENSP00000206423/1-950 NFGLRHITIL KLLGVGEEVG GVLELFPING SSVVEREDVP AHLVKDIRNY ENSBTAP00000014293/1-954 NFGLRHITVL KLLGVGEEVG GVLELFPING SSVVEREDVP AHLVKDIRNY ENSTTRP00000004113/1-948 NFGLRHITVL KLLGVGEEVG GVLELFPING SSVVEREDVP AHLVKDIRNY bmy_09357T0/1-991 NFGLRHITVL KLLGVGEEVG GVLELFPING SSVVEREDVP AHLVKDIRNY BACU009336/1-991 NFGLRHITVL KLLGVGEEVG GVLELFPING SSVVEREDVP AHLVKDIRNY 901 950 ENSP00000206423/1-950 FQVSPEYFSM LLVGKDGNVK SWYPSPMWSM VIVYDLIDSM QLRRQEMAIQ ENSBTAP00000014293/1-954 FQVSPEYFSM LLVGKDGNVK SWYPSPMWSM VIVYDLIDSM QLRRQEMAIQ ENSTTRP00000004113/1-948 FQVSPEYFSM LLVGKDGNVK SWYPSPMWSM VIVYDLIDSM QLRRQEMAIQ bmy_09357T0/1-991 FQVSPEYFSM LLVGKDGNVK SWYPSPMWSM VIVYDLIDSM QLRRQEMAIQ BACU009336/1-991 FQVSPEYFSM LLVGKDGNVK SWYPSPMWSM VIVYDLIDSM QLRRQEMAIQ 951 1000 ENSP00000206423/1-950 QSLGMRCPED EYAGYGYHSY HQGYQDGYQD DYRHHESYHH GYPY ENSBTAP00000014293/1-954 QSLGMRCPED EYAGYGYHSY HQGYQDGYQD DYRHHESYHH GYPY ENSTTRP00000004113/1-948 QSLGMRCPED EYAGYGYHSY HQGYQDGYQD DYRHHESYHH GYPY bmy_09357T0/1-991 QSLGMRCPED EYAGYGYHSY HQGYQDGYQD DYRHHESYHH GYPY BACU009336/1-991 QSLGMRCPED EYAGYGYHSY HQGYQDGYQD DYRHHESYHH GYPY