KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:45 2014 Check: 00 .. Name: bmy_08091T0/1-405 Len: 510 Check: 272 Weight: 1.00 Name: ENSP00000247178/1-492 Len: 510 Check: 8681 Weight: 1.00 Name: ENSBTAP00000014296/1-492 Len: 510 Check: 6319 Weight: 1.00 Name: BACU015365/1-466 Len: 510 Check: 5600 Weight: 1.00 Name: ENSTTRP00000001908/1-489 Len: 510 Check: 8037 Weight: 1.00 // 1 50 bmy_08091T0/1-405 ---------- ---------- ---------- ---------- -------MEN ENSP00000247178/1-492 ---------- --------MA SPSGKGARAL EAPGCGPRPL ARDLVDSVDD ENSBTAP00000014296/1-492 ---------- --------MA SPSGKGAQAQ EAPGCGPQPL ARDLVDSVDD BACU015365/1-466 MHLVENKIPR DWLCSQAIMA SPSGKGSRAP EAPGCGPQPV ARDLVDSVDD ENSTTRP00000001908/1-489 ---------- --------MA SPSGKGSRAP EAAGCGPQPV ARDLVDSND- 51 100 bmy_08091T0/1-405 AE-------- ---------- ---------- ---------- DGFVDKKERL ENSP00000247178/1-492 AEGLYVAVER CPLCNTTRRR LTCAKCVQSG DFVYFDGRDR ERFIDKKERL ENSBTAP00000014296/1-492 AEGLYVAVER CPLCNTTRRR LTCAKCVQSG DFVYFDGRDR ERFIDKKERL BACU015365/1-466 AEGLYVAVER CPLCNTTRRR LTCAKCVQSG DFVYFDGRDR ERFIDKKERL ENSTTRP00000001908/1-489 -AGLYVAVER CPLC-TTRRR LTCAKCVQSG NFVYFDGRDR ERFIDKKERL 101 150 bmy_08091T0/1-405 SQLKSKQEEF QKEVLKAMEG KWITDQLRWK IMSCKMRIEQ LKQTICKGNE ENSP00000247178/1-492 SRLKSKQEEF QKEVLKAMEG KWITDQLRWK IMSCKMRIEQ LKQTICKGNE ENSBTAP00000014296/1-492 SQLKSKQEEF QKEVLKAMEG KWMTDQLRWK IMSCKMRIEQ LKQTICKGNE BACU015365/1-466 SQLKSKQEEF QKE------- --------WK IMSCKMRIEQ LKQTICKGNE ENSTTRP00000001908/1-489 SQLKSKQEEF QKEVLKAMEG KWITDQLRWK IMSCKMRIEQ LKQTICKGNE 151 200 bmy_08091T0/1-405 EMKKNSEGLL KTKEKNQKLY TRAQRHQEKK EKIQRHNRKL GDLVEKKNTD ENSP00000247178/1-492 EMEKNSEGLL KTKEKNQKLY SRAQRHQEKK EKIQRHNRKL GDLVEKKTID ENSBTAP00000014296/1-492 EMKKNAEGLL KTKEKNQKLY TRAQRHQEKK EKIQRHNRKL GDLVEKKNTD BACU015365/1-466 EMKKNSEGLL KTKEKNQKLY TRAQRHQEKK EKIQRHNRKL GDLVEKKNTD ENSTTRP00000001908/1-489 EMKKNSEGLL KTKEKNQKLY TRAQRHQEKK EKIQRHNRKL GDLVEKKNTD 201 250 bmy_08091T0/1-405 LRSHYERLAN LRRSHILELT SVIFPIEEVK TGVRDPTDVS SENDSAMTSS ENSP00000247178/1-492 LRSHYERLAN LRRSHILELT SVIFPIEEVK TGVRDPADVS SESDSAMTSS ENSBTAP00000014296/1-492 LRSHYERLAD LRRSHILELT SVIFPIEEVK TGARDPADVS SESDSAMTSS BACU015365/1-466 LRSHYERLAN LRRSHILELT SVIFPIEEVK TGVRDPTDVS SESDSAMTSS ENSTTRP00000001908/1-489 LRSHYERLAN LRRSHILELT SVIFPIEEVK TGVRDPTDVS SESDSAMTSS 251 300 bmy_08091T0/1-405 TVSKLAEARR TTYLSGRWVC DDHNGDTSIS ITGPWISLPN NGDYSAYYSW ENSP00000247178/1-492 TVSKLAEARR TTYLSGRWVC DDHNGDTSIS ITGPWISLPN NGDYSAYYSW ENSBTAP00000014296/1-492 TVSKLAEARR TTYLSGRWVC DDHNGDTSIS ITGPWISLPN NGDYSAYYNW BACU015365/1-466 TVSKLAEARR TTYLSGRWVC DDHNGDTSIS ITGPWISLPN NGDYSAYYSW ENSTTRP00000001908/1-489 TVSKLAEARR TTYLSGRWVC DDHNGDTSIS ITGPWISLPN NGDYSAYYSW 301 350 bmy_08091T0/1-405 I--------- --------WS IITLLTRSAL RCAMRLSWST FCLI---YST ENSP00000247178/1-492 VEEKKTTQGP DMEQSNPAYT ISAALCYATQ LVNILSHILD VNLPKKLCNS ENSBTAP00000014296/1-492 VEEKKTTQGP DMEHNNPAYT ISAALCYATQ LVNILSHILD INLPKKLCNS BACU015365/1-466 VEEKKTTQGP DMEHNNPAYT ISAALCYATQ LVNILSHILD VNLPKKLCN- ENSTTRP00000001908/1-489 VEEKKTTQGP DMEHNNPAYT ISAALCYATQ LVNILSHILD VNLPKKLCNS 351 400 bmy_08091T0/1-405 EFCGENLSKQ KFTRAVKKLN TNILYLCFSQ HVNLDQLQPL HTLRNLMYLV ENSP00000247178/1-492 EFCGENLSKQ KFTRAVKKLN ANILYLCFSQ HVNLDQLQPL HTLRNLMYLV ENSBTAP00000014296/1-492 EFCGENLSRQ KFTRAVKKLN ANILYLCFSQ HVNLDQLQPL HTLRNLMYLV BACU015365/1-466 ---------- ---------- --------RQ HVNLDQLQPL HTLRNLMYLV ENSTTRP00000001908/1-489 EFCGENLSKQ KFTRAVKKLN TNILYLCFSQ HVNLDQLQPL HTLRNLMYLV 401 450 bmy_08091T0/1-405 SPNAEHLGRS GPFEVRADLE ESMEFVDPGV AGESDESGDE HVSDEETDLG ENSP00000247178/1-492 SPSSEHLGRS GPFEVRADLE ESMEFVDPGV AGESDESGDE RVSDEETDLG ENSBTAP00000014296/1-492 SPNSEHLGRS GPFEVRADLE ESMEFVDPGV AGESDESGDE HVSDEETDLG BACU015365/1-466 SPNAEHLGRS GPFEVRADLE ESMEFVDPGV AGESDESGDE HVSDEETDLG ENSTTRP00000001908/1-489 SPNAEHLGRS GPFEVRADLE ESMEFVDPGV AGESDESGDE HVSDEETDLG 451 500 bmy_08091T0/1-405 TDWENLPSPR FCDIPSQPVE VSESQSTQAS PPIASSSAGG MISSAAASVT ENSP00000247178/1-492 TDWENLPSPR FCDIPSQSVE VSQSQSTQAS PPIASSSAGG MISSAAASVT ENSBTAP00000014296/1-492 TDWENLPSPR FCDIPSQPVE VSQSQSSQAS PPIASSSAGG MISSAAASVT BACU015365/1-466 TDWENLPSPR FCDIPSQPVE VSESQSTQAS PPIASSSAGG MISSAAASVT ENSTTRP00000001908/1-489 TDWENLPSPR FCDIPSQPVE VSESQSTQAS PPIASSSAGG MISSAAASVT 501 550 bmy_08091T0/1-405 SWFKAYTGHR ENSP00000247178/1-492 SWFKAYTGHR ENSBTAP00000014296/1-492 SWFKAYTGHR BACU015365/1-466 SWFKAYTGHR ENSTTRP00000001908/1-489 SWFKAYTGHR