KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:52:47 2014 Check: 00 .. Name: ENSTTRP00000002453/1-744 Len: 876 Check: 6404 Weight: 1.00 Name: bmy_15324T0/1-854 Len: 876 Check: 1414 Weight: 1.00 Name: ENSP00000413520/1-788 Len: 876 Check: 5163 Weight: 1.00 Name: ENSBTAP00000014318/1-787 Len: 876 Check: 820 Weight: 1.00 // 1 50 ENSTTRP00000002453/1-744 ---------- ---------- ---------- ---------- -MGSADSKLN bmy_15324T0/1-854 QAGCAGPLLR EQLGPRSWSW IPSRGPGGSQ GQGRAGAGSS DMGSADSKLN ENSP00000413520/1-788 ---------- ---------- ---------- ---------- -MGSTDSKLN ENSBTAP00000014318/1-787 ---------- ---------- ---------- ---------- -MGSADSKLN 51 100 ENSTTRP00000002453/1-744 FRKAVIQLTT KTQPVEATDD AFWDQFWADT ATSVQDVFAL VPAAEIRAVR bmy_15324T0/1-854 FRKAVIQLTT KTQPVEATDD AFWDQFWADT ATSVQDVFAL VPAAEIRAVR ENSP00000413520/1-788 FRKAVIQLTT KTQPVEATDD AFWDQFWADT ATSVQDVFAL VPAAEIRAVR ENSBTAP00000014318/1-787 FRKAVIQLTT KTQPVEATDD AFWDQFWADT ATSVQDVFAL VPAAEIRAVR 101 150 ENSTTRP00000002453/1-744 EESPSNLATL CYKAVEKLVQ GAESGCHSEK EKQIVLNCSR LLTRVLPYIF bmy_15324T0/1-854 EESPSNLATL CYKAVEKLVQ GAESGCHSEK EKQIVLNCSR LLTRVLPYIF ENSP00000413520/1-788 EESPSNLATL CYKAVEKLVQ GAESGCHSEK EKQIVLNCSR LLTRVLPYIF ENSBTAP00000014318/1-787 EESPSNLATL CYKAVEKLVQ GAESGCHSEK ERQIVLNCSR LLTRVLPYIF 151 200 ENSTTRP00000002453/1-744 EDPDWRGFFW STVPGAGRGA -----QGEDD DENARPLAES LLLAVADLLF bmy_15324T0/1-854 EDPDWRGFFW STVPGAGRGA VLCPKQGEDD DENARPLAES LLLAIADLLF ENSP00000413520/1-788 EDPDWRGFFW STVPGAGRGG -----QGEED DEHARPLAES LLLAIADLLF ENSBTAP00000014318/1-787 EDPDWRGFFW STVPGAGRGG ------GEDD DENARPLAES LLLAIADLLF 201 250 ENSTTRP00000002453/1-744 CPDFTVQSHR RSTVDSAEDI HSLDSCEYIW EAGVGFAHSP QPNYNHDMNR bmy_15324T0/1-854 CPDFTVQSHR RSTVDSAEDI HSLDSCEYIW EAGVGFAHSP QPNYNHDMNR ENSP00000413520/1-788 CPDFTVQSHR RSTVDSAEDV HSLDSCEYIW EAGVGFAHSP QPNYIHDMNR ENSBTAP00000014318/1-787 CPDFTVQSHR RSTVDSAEDI HSLDSCEYIW EAGVGFAHSP QPNYIHDMNR 251 300 ENSTTRP00000002453/1-744 MELLKLLLTC FSEAMYLPPA PDSSSVNPWV QFFCSTENRH ALPLFTSLLN bmy_15324T0/1-854 MELLKLLLTC FSEAMYLPPA PDSSSINPWV QFFCSTENRH ALPLFTSLLN ENSP00000413520/1-788 MELLKLLLTC FSEAMYLPPA PESGSTNPWV QFFCSTENRH ALPLFTSLLN ENSBTAP00000014318/1-787 MELLKLLLTC FSEAMYLPPA PDSSSINPWV QFFCSTENRH ALPLFTSLLN 301 350 ENSTTRP00000002453/1-744 TVCAYDPVGY GIPYNHLLFS DHREPLVEEA AQVLIVSLDH DGAT---PTV bmy_15324T0/1-854 TVCAYDPVGY GIPYNHLLFS DYREPLVEEA AQVLIVTLDH DGAT---PTV ENSP00000413520/1-788 TVCAYDPVGY GIPYNHLLFS DYREPLVEEA AQVLIVTLDH DSASSASPTV ENSBTAP00000014318/1-787 TVCAYDPVGY GIPYNHLLFS DYREPLVEEA AQVLIVTLDH DSATSASPTV 351 400 ENSTTRP00000002453/1-744 DGTTTGTAMD DADPPGPENL FVNYLSRIHR EEXXXXXXXX XXXXXXXXXX bmy_15324T0/1-854 DGTTTGTAMD DAD------- ---------- --DFQFILKG IARLLSNPLL ENSP00000413520/1-788 DGTTTGTAMD DADPPGPENL FVNYLSRIHR EEDFQFILKG IARLLSNPLL ENSBTAP00000014318/1-787 DGTTTGTAMD DADPPGPENL FVNYLSRIHR EEDFQFILKG IARLLSNPLL 401 450 ENSTTRP00000002453/1-744 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXK FLFFVLKSSD VLDILVPILY bmy_15324T0/1-854 QTYLPNSTKK IQFHQELLVL FWKLCDFNKK FLFFVLKTSD VLDILVPILY ENSP00000413520/1-788 QTYLPNSTKK IQFHQELLVL FWKLCDFNKK FLFFVLKSSD VLDILVPILF ENSBTAP00000014318/1-787 QTYLPNSTKK IQFHQELLVL FWKLCDFNKK FLFFVLKSSD VLDILVPILY 451 500 ENSTTRP00000002453/1-744 FLNDARADQS RVGLMHIGVF ILLLLSGERN FGVRLNKPYS VRVPMDIPVF bmy_15324T0/1-854 FLNDARADQS RVGLMHIGVF ILLLLSGERN FGVRLNKPYS VRVPMDIPVF ENSP00000413520/1-788 FLNDARADQS RVGLMHIGVF ILLLLSGERN FGVRLNKPYS IRVPMDIPVF ENSBTAP00000014318/1-787 FLNDARADQS RVGLMHIGVF ILLLLSGERN FGVRLNKPYS VRVPMDIPVF 501 550 ENSTTRP00000002453/1-744 TGTHADLLIV VFHKIITSGH QRLQPLFDCL LTIVVNXXXX XXXXXXXXXX bmy_15324T0/1-854 TGTHADLLIV VFHKIITSGH QRLQPLFDCL LTIVVNVSPY LKSLSMVAAN ENSP00000413520/1-788 TGTHADLLIV VFHKIITSGH QRLQPLFDCL LTIVVNVSPY LKSLSMVTAN ENSBTAP00000014318/1-787 TGTHADLLIV VFHKIITSGH QRLQPLFDCL LTIVVNVSPY LKSLSMVSAN 551 600 ENSTTRP00000002453/1-744 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXNSNLVYAI bmy_15324T0/1-854 KLLHLLEAFS TTWFLFSAAQ NHHLVFFLLE VFNNIIQYQF DGNSNLVYAI ENSP00000413520/1-788 KLLHLLEAFS TTWFLFSAAQ NHHLVFFLLE VFNNIIQYQF DGNSNLVYAI ENSBTAP00000014318/1-787 KLLHLLEAFS TTWFLFSAAQ NHHLVFFLLE VFNNIIQYQF DGNSNLVYAI 601 650 ENSTTRP00000002453/1-744 IRKRSVFHQL ANLPTDPPTI HKALQRRRRA PEALSRTSSQ EGVSMEGSHP bmy_15324T0/1-854 IRKRSVFHQL ANLPTDPPTI HKALQRRRRA PEALSRTSSQ EGVSMEGSHP ENSP00000413520/1-788 IRKRSIFHQL ANLPTDPPTI HKALQRRRRT PEPLSRTGSQ EGTSMEGSRP ENSBTAP00000014318/1-787 IRKRSVFHQL ANLPTDPPAI HKALQRRRRP PEPLSRAGSQ EGASMEGSRP 651 700 ENSTTRP00000002453/1-744 AAPAEPGTLK ASLVATPGIE KLTEKSQVSE DGTLRSLEPA PQQNSAECSP bmy_15324T0/1-854 AAPAEPGTLK TSLVATPGIE KLTEKSQVSE DGTLRSLEPA PQQNSAEGSP ENSP00000413520/1-788 AAPAEPGTLK TSLVATPGID KLTEKSQVSE DGTLRSLEPE PQQSLEDGSP ENSBTAP00000014318/1-787 AVPAEPGTLK TSLVATPGID KLTEKSQVSE DGTLRSLESA PQQSSAEDSP 701 750 ENSTTRP00000002453/1-744 ASEE------ ---------- ---------- -PSQAWREQR RLSSASAGGQ bmy_15324T0/1-854 ASETVGGTGK RSCPPAPHPP PHPLPTSLSL IPSPGPGAQP GVAGAAATVQ ENSP00000413520/1-788 AKGE------ ---------- ---------- -PSQAWREQR RPSTSSASGQ ENSBTAP00000014318/1-787 ATEE------ ---------- ---------- -PSQAWREQR RLSSASASGQ 751 800 ENSTTRP00000002453/1-744 ----WSPTSE W--------- --VLSWKSKL PLQTIMRLLQ VLVPQVEKIC bmy_15324T0/1-854 RISWWAVEPD VGVAQEPQSL PQVVSWKSKL PLQTIMRLLQ VLVPQVEKIC ENSP00000413520/1-788 ----WSPTPE W--------- --VLSWKSKL PLQTIMRLLQ VLVPQVEKIC ENSBTAP00000014318/1-787 ----WSPTSE W--------- --ILSWKSKL PLQTIMRLLQ VLVPQVEKIC 801 850 ENSTTRP00000002453/1-744 IDKGLTDESE ILRFLQHGTM VGLLPVPHPI LIRKY----- ---------- bmy_15324T0/1-854 IDKGLTDESE ILRFLQHGTL VGLLPVPHPI LIRKYQANSG TAMWFRTYMW ENSP00000413520/1-788 IDKGLTDESE ILRFLQHGTL VGLLPVPHPI LIRKYQANSG TAMWFRTYMW ENSBTAP00000014318/1-787 IDKGLTDESE ILRFLQHGTL VGLLPVPHPI LIRKYQANSG TAMWFRTYMW 851 900 ENSTTRP00000002453/1-744 ---------- ---------- ------ bmy_15324T0/1-854 GVIYLRNVDP PVWYDTDVKL FEIQRV ENSP00000413520/1-788 GVIYLRNVDP PVWYDTDVKL FEIQRV ENSBTAP00000014318/1-787 GVIYLRNVDP PVWYDTDVKL FEIQRV