KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:52:50 2014 Check: 00 .. Name: ENSTTRP00000012611/1-1322 Len: 1374 Check: 3901 Weight: 1.00 Name: bmy_01303T0/1-1314 Len: 1374 Check: 7109 Weight: 1.00 Name: ENSP00000432327/1-1322 Len: 1374 Check: 7292 Weight: 1.00 Name: ENSBTAP00000014362/1-1337 Len: 1374 Check: 4446 Weight: 1.00 // 1 50 ENSTTRP00000012611/1-1322 ---------- ---------- ---------- -------MPV VWPTLLDLSR bmy_01303T0/1-1314 MARAGVSPRT LERRIPGQVR INAKGRQALW GYQKEAAMPV VWPTLLDLSR ENSP00000432327/1-1322 ---------- ---------- ---------- -------MPV VWPTLLDLSR ENSBTAP00000014362/1-1337 ---------- ---------- ---------- -------MPV VWPTLLDLSR 51 100 ENSTTRP00000012611/1-1322 DECKRILRKL ELEAYAGVIS ALRAQGDLTK EKKDLLGELS KVLSISTERH bmy_01303T0/1-1314 DECKRILRKL ELEAYAGVIS ALRAQGDLTK EKKDLLGELS KVLSISTERH ENSP00000432327/1-1322 DECKRILRKL ELEAYAGVIS ALRAQGDLTK EKKDLLGELS KVLSISTERH ENSBTAP00000014362/1-1337 DECKRILRKL ELEAYAGVIS ALRAQGDLTK EKKDLLGELS KVLSISTERH 101 150 ENSTTRP00000012611/1-1322 RAEVRRAVND ERLTTIAH-- ---------- --NMSGPNSS AEWSIEGRRL bmy_01303T0/1-1314 RAEVRRAVND ERLTTIAHKM NLSLYLGERP SYSMSGPNSS SEWSIEGRRL ENSP00000432327/1-1322 RAEVRRAVND ERLTTIAH-- ---------- --NMSGPNSS SEWSIEGRRL ENSBTAP00000014362/1-1337 RAEVRRAVND ERLTTIAHKM NLSLYLGERP SYSMSGPNSS SEWSIEGRRL 151 200 ENSTTRP00000012611/1-1322 VPLMPRLVPQ TAFTVTANAV ANAAIQHNAS LPVPAETGSK EVVVCYSYTS bmy_01303T0/1-1314 VPLMPRLVPQ TAFTVTANAV ANAAIQHNAS LPVPAETGSK EVVVCYSYTS ENSP00000432327/1-1322 VPLMPRLVPQ TAFTVTANAV ANAAIQHNAS LPVPAETGSK E-VVCYSYTS ENSBTAP00000014362/1-1337 VPLMPRLVPQ TAFTVTANAV ANAAVQHNAS LPVPAETGSK EVVVCYSYTS 201 250 ENSTTRP00000012611/1-1322 TTSTPTSTPV PSGSIATVKS PRPASPASNV VVLPSGSTVY VKSVSCSDED bmy_01303T0/1-1314 TTSTPTSTPV PSGSIATVKS PRPASPASNV VVLPSGSTVY VKSVSCSDED ENSP00000432327/1-1322 TTSTPTSTPV PSGSIATVKS PRPASPASNV VVLPSGSTVY VKSVSCSDED ENSBTAP00000014362/1-1337 TTSTPTSTPV PSGSIATVKS PRPASPASNV VVLPSGSTVY VKSVSCSDED 251 300 ENSTTRP00000012611/1-1322 EKPRKRRRTN SSSSSPVVLK EVPKAVVPVS KTITVPVSGS PKMSNIMQSI bmy_01303T0/1-1314 EKPRKRRRTN SSSSSPVVLK EVPKAVVPVS KTITVPVSGS PKMSNIMQSI ENSP00000432327/1-1322 EKPRKRRRTN SSSSSPVVLK EVPKAVVPVS KTITVPVSGS PKMSNIMQSI ENSBTAP00000014362/1-1337 EKPRKRRRTN SSSSSPVVLK EVPKAVVPVS KTITVPVSGS PKMSNIMQSI 301 350 ENSTTRP00000012611/1-1322 ANSLPPHMSP VKITFTKPST QTTNTTTQKV IIVTTSPSST FVPNILSKSH bmy_01303T0/1-1314 ANSLPPHMSP VKITFTKPST QTTNTTTQKV IIVTTSPSST FVPNILSKSH ENSP00000432327/1-1322 ANSLPPHMSP VKITFTKPST QTTNTTTQKV IIVTTSPSST FVPNILSKSH ENSBTAP00000014362/1-1337 ANSLPPHMSP VKITFTKPST QTTNSTTQKV IIVTTSPSST FVPNILSKSH 351 400 ENSTTRP00000012611/1-1322 NYAAVTKLVP TSVIASTTQK PPVVITASQS SLVSSSSSGS SSSTPSPIPN bmy_01303T0/1-1314 NYAAVTKLVP TSVIASTTQK PPVVITASQS SLVFSEETLS IQPTTSSKAD ENSP00000432327/1-1322 NYAAVTKLVP TSVIASTTQK PPVVITASQS SLVSNSSSGS SSSTPSPIPN ENSBTAP00000014362/1-1337 NYAAVTKLVP TSVIASTTQK PPVVITASQS SLVSSSSSGS SSSTPSPIPN 401 450 ENSTTRP00000012611/1-1322 TVAVTAVVSS TPSVVMSTVA QGVSTSAIKM ASTRLPSPKS LVGAPTQILA bmy_01303T0/1-1314 STLSE----- -----FSFYS VGVSTSAIKM ASTRLPSPKS LVGAPTQILA ENSP00000432327/1-1322 TVAVTAVVSS TPSVVMSTVA QGVSTSAIKM ASTRLPSPKS LVSAPTQILA ENSBTAP00000014362/1-1337 TVAVTAVVSS TPSVVMSTVA QGVSTSAIKM ASTRLPSPKS LVGAPTQILA 451 500 ENSTTRP00000012611/1-1322 QFPKQHQQSP KQQLHQVQQQ TQQQVAQPSP VSHQQQPQQS PLPPGIKPTI bmy_01303T0/1-1314 QFPKQHQQSP KQQLHQVQQQ TQQQVAQPSP VSHQQQPQQS PLPPGIKPTI ENSP00000432327/1-1322 QFPKQHQQSP KQQLYQVQQQ TQQQVAQPSP VSHQQQPQQS PLPPGIKPTI ENSBTAP00000014362/1-1337 QFPKQHQQSP KQQLHQVQQQ TQQQVAQPSP VSHQQQPQQS PLPPGIKPTI 501 550 ENSTTRP00000012611/1-1322 QIKQESGVKI ITQQVQPSKI LPKPVTATLP TSSNSPIMVV SSNGAIMTTK bmy_01303T0/1-1314 QIKQES---- ---------- ---------- ---------- ---------- ENSP00000432327/1-1322 QIKQESGVKI ITQQVQPSKI LPKPVTATLP TSSNSPIMVV SSNGAIMTTK ENSBTAP00000014362/1-1337 QIKQESGVKI ITQQVQPSKI LPKPVTATLP TSSNSPIMVV SSNGAIMTTK 551 600 ENSTTRP00000012611/1-1322 LVTTPTXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_01303T0/1-1314 ------GTQA TYTRPTVSPS IGRMAATPGA ATYVKTTSGS IITVVPKSLA ENSP00000432327/1-1322 LVTTPTGTQA TYTRPTVSPS IGRMAATPGA ATYVKTTSGS IITVVPKSLA ENSBTAP00000014362/1-1337 LVTTPTGTQA TYTRPTVSPS IGRMAATPGA ATYVKTTSGS IITVVPKSLA 601 650 ENSTTRP00000012611/1-1322 XXXXXXXXXX XXXXTTTKIT TIPMTSKPNV IVVQKTTGKG TTIQGLPGKN bmy_01303T0/1-1314 TLGGKIISSN IVSGTTTKIT TIPMTSKPNV IVVQKTTGKG TTIQGLPGKN ENSP00000432327/1-1322 TLGGKIISSN IVSGTTTKIT TIPMTSKPNV IVVQKTTGKG TTIQGLPGKN ENSBTAP00000014362/1-1337 TLGGKIISSN IVSGTTTKIT TIPMTSKPNV IVVQKTTGKG TTIQGLPGKN 651 700 ENSTTRP00000012611/1-1322 VVTTLLNAGX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_01303T0/1-1314 VVTTLLNAGG EKTIQTVPTG AKPAIITATR PITKMIVTQP KGIGSTVQPA ENSP00000432327/1-1322 VVTTLLNAGG EKTIQTVPTG AKPAILTATR PITKMIVTQP KGIGSTVQPA ENSBTAP00000014362/1-1337 VVTTLLNAGG EKTIQTVPTG AKPAIITATR PITKMIVTQP KGIGSTVQPA 701 750 ENSTTRP00000012611/1-1322 XXXXXXXXXX XXXXXXXVLI KPKPVTFQAT VVSEQTRQLV TETLQQASRV bmy_01303T0/1-1314 AKIIPTKIVY GQQGKTQVLI KPKPVTFQAT VVSEQTRQLV TETLQQASRV ENSP00000432327/1-1322 AKIIPTKIVY GQQGKTQVLI KPKPVTFQAT VVSEQTRQLV TETLQQASRV ENSBTAP00000014362/1-1337 AKIIPTKIVY GQQGKTQVLI KPKPVTFQAT VVSEQTRQLV TETLQQASRV 751 800 ENSTTRP00000012611/1-1322 AEAGNSSIQE GKEEPQSYTD SSSSSTESSQ SSQDSQPVVH VIASRRQDWS bmy_01303T0/1-1314 AEAGNSSIQE GKEEPQSYTD SSSSSTESSQ SSQDSQPVVH VIASRRQDWS ENSP00000432327/1-1322 AEAGNSSIQE GKEEPQNYTD SSSSSTESSQ SSQDSQPVVH VIASRRQDWS ENSBTAP00000014362/1-1337 AEAGNSSIQE GKEEPQSYTD SSSSSTESSQ SSQDSQPVVH VIASRRQDWS 801 850 ENSTTRP00000012611/1-1322 EHEIAMETSP TIIYQDVSSE SQSATSTIKA LLELQQTTVK EKLESKPRQP bmy_01303T0/1-1314 EHEIAMETSP TIIYQDVSSE SQSATSTIKA LLELQQTTVK EKLESKPRQP ENSP00000432327/1-1322 EHEIAMETSP TIIYQDVSSE SQSATSTIKA LLELQQTTVK EKLESKPRQP ENSBTAP00000014362/1-1337 EHEIAMETSP TIIYQDVSSE SQSATSTIKA LLELQQTTVK EKLESKPRQP 851 900 ENSTTRP00000012611/1-1322 TIDLSQMAVP IQMTQEKRHS PESPSIAVVE SELVAEYITT ERTDEGTEVA bmy_01303T0/1-1314 TIDLSQMAVP IQMTQEKRHS PESPSIAVVE SELVAEYITT ERTDEGTEVA ENSP00000432327/1-1322 TIDLSQMAVP IQMTQEKRHS PESPSIAVVE SELVAEYITT ERTDEGTEVA ENSBTAP00000014362/1-1337 TIDLSQMAVP IQMTQEKRHS PESPSIAVVE SELVAEYITT ERTDEGTEVA 901 950 ENSTTRP00000012611/1-1322 FPLLVSHRSQ PQQPSQPQRT LLQHVAQSQT ATQTSVVVKS IPASSPGAIT bmy_01303T0/1-1314 FPLLVSHRSQ PQQPSQPQRT LLQHVAQSQT ATQTSVVVKS IPASSPGAIT ENSP00000432327/1-1322 FPLLVSHRSQ PQQPSQPQRT LLQHVAQSQT ATQTSVVVKS IPASSPGAIT ENSBTAP00000014362/1-1337 FPLLVSHRSQ PQQPSQPQRT LLQHVAQSQT ATQTSVVVKS IPASSPGAIT 951 1000 ENSTTRP00000012611/1-1322 HIMQQALSSH TA-TKHSEEL GTEEGEVEEM DTLDPQTGLF YRSALTQSQS bmy_01303T0/1-1314 HIMQQALSSH TAFTKHSEEL GTEEGEVEEM DTLDPQTGLF YRSALTQSQS ENSP00000432327/1-1322 HIMQQALSSH TAFTKHSEEL GTEEGEVEEM DTLDPQTGLF YRSALTQSQS ENSBTAP00000014362/1-1337 HIMQQALSSH TAFTKHSEEL GTEEGEVEEM DTLDPQTGLF YRSALTQSQS 1001 1050 ENSTTRP00000012611/1-1322 AKQQKLSQPQ LEQTQLQVKT LQCFQTKQKQ TIHLQADQLQ HKLPQMPQLS bmy_01303T0/1-1314 AKQQKLSQPQ LEQTQLQVKT LQCFQTKQKQ TIHLQADQLQ HKLPQMPQLS ENSP00000432327/1-1322 AKQQKLSQPP LEQTQLQVKT LQCFQTKQKQ TIHLQADQLQ HKLPQMPQLS ENSBTAP00000014362/1-1337 AKPQKLSQPQ LEQTQLQVKT LQCFQTKQKQ TIHLQADQLQ HKLPQMPQLS 1051 1100 ENSTTRP00000012611/1-1322 IRHQKLTPLQ QEQAQPKPDV QHTQHPMVAK DRQLPTLMAQ PPQTVVQVLA bmy_01303T0/1-1314 IRHQKLTPLQ QEQAQPKPDV QHTQHPMVAK DRQLPTLMAQ PPQTVVQVLA ENSP00000432327/1-1322 IRHQKLTPLQ QEQAQPKPDV QHTQHPMVAK DRQLPTLMAQ PPQTVVQVLA ENSBTAP00000014362/1-1337 IRHQKLTPLQ QEQAQPKPDV QHTQHPMVAK DRQLPTLMAQ PPQTVVQVLA 1101 1150 ENSTTRP00000012611/1-1322 VKTTQQLPKL QQAPNQPKIY VQPQTPQSQM PLPASSEKQP ASQVEQPVIT bmy_01303T0/1-1314 VKTTQQLPKL QQAPNQPKIY VQPQTPQSQM PLPASSEKQP ASQVEQPVIT ENSP00000432327/1-1322 VKTTQQLPKL QQAPNQPKIY VQPQTPQSQM SLPASSEKQT ASQVEQPIIT ENSBTAP00000014362/1-1337 VKTTQQLPKL QQAPNQPKIY VQPQTPQSQM PLPASSEKQP ASQVEQPIIT 1151 1200 ENSTTRP00000012611/1-1322 QGSSVTKITF EGRQPPTVTK ITGGSSVPKL TSPVTSISPI QASEKTAVSD bmy_01303T0/1-1314 QGSSVTKITF EGRQPPTVTK ITGGSSVPKL TSPVTSISPI QASEKTAVSD ENSP00000432327/1-1322 QGSSVTKITF EGRQPPTVTK ITGGSSVPKL TSPVTSISPI QASEKTAVSD ENSBTAP00000014362/1-1337 QGSSVTKITF EGRQPPTVTK ITGGSSVPKL TSPVTSISPI QASEKTAVSD 1201 1250 ENSTTRP00000012611/1-1322 ILKMSLMEAQ IDTNVEHMVV DPPKKALATS MLTGEAGSLP STHVVVAGMA bmy_01303T0/1-1314 ILKMSLMEAQ IDTNVEHIVV DPPKKALATS MLTGEAGSLP STHVVVAGMA ENSP00000432327/1-1322 ILKMSLMEAQ IDTNVEHMIV DPPKKALATS MLTGEAGSLP STHMVVAGMA ENSBTAP00000014362/1-1337 ILKMSLMEAQ IDTNVEHLVV DPPKKALATG VLTGEAGSLP STHVVVAGMA 1251 1300 ENSTTRP00000012611/1-1322 NSTPQQQKCR ESCSSPSAVG PPLTTRKIDA PGVPTTGQFM RIQNVVQKKA bmy_01303T0/1-1314 NSTPQQQKCR ESCSSPSAVG PPLTTRKIDA PGVPTTGQFM RIQNVGQKKA ENSP00000432327/1-1322 NSTPQQQKCR ESCSSPSTVG SSLTTRKIDP PAVPATGQFM RIQNVGQKKA ENSBTAP00000014362/1-1337 NSTPQQQKCR ESCSSPSAVG PPLTTRKIDA PGVPATGQFM RIQNVGQKKA 1301 1350 ENSTTRP00000012611/1-1322 EESPAEIIIQ AIPQYAIPCH SSSNVVVEPS GLLELNNFTS QQLDDDETAM bmy_01303T0/1-1314 EESPAEIIIQ AIPQYAIPCH SSSNVVVEPS GLLELNNFTS QQLDDDETAM ENSP00000432327/1-1322 EESPAEIIIQ AIPQYAIPCH SSSNVVVEPS GLLELNNFTS QQLDDEETAM ENSBTAP00000014362/1-1337 EESPAEIIIQ AIPQYAIPCH SSSNVVVEPS GLLELNNFTS QQLDDDETAM 1351 1400 ENSTTRP00000012611/1-1322 EQDIDSSTEE GTEPSPSQSS AERS bmy_01303T0/1-1314 EQDIDSSTED GTEPSPSQSS AERS ENSP00000432327/1-1322 EQDIDSSTED GTEPSPSQSS AERS ENSBTAP00000014362/1-1337 EQDIDSSTED GTEPSPSQSS AERS