KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:53 2014 Check: 00 .. Name: ENSP00000356057/1-612 Len: 652 Check: 9011 Weight: 1.00 Name: ENSBTAP00000014382/1-620 Len: 652 Check: 7889 Weight: 1.00 Name: ENSTTRP00000010743/1-545 Len: 652 Check: 4641 Weight: 1.00 Name: bmy_22209T0/1-476 Len: 652 Check: 3670 Weight: 1.00 Name: BACU011760/1-426 Len: 652 Check: 9323 Weight: 1.00 // 1 50 ENSP00000356057/1-612 MGAAPSPTQA SSRGGGPGPP APTRAVSSSS RARGGALSAL GPSPARPLTT ENSBTAP00000014382/1-620 LLRPPSAGRG GA--AGRVPP SPSSLGLAP- RAVAGALSAP GPTVLR--AP ENSTTRP00000010743/1-545 MGAAPSPPQA PL--GGAGTS IPTLRGAASQ RRSAGALSAP GPL------- bmy_22209T0/1-476 ---------- ---------- ---------- ---------- ---------- BACU011760/1-426 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000356057/1-612 SPAPAPPPRS RPARQQPDPQ CWEKRGGAGG DTKGGAAG-- ---------- ENSBTAP00000014382/1-620 SPPPPPPASP ALATPAPGPR SWEERGGEGS NTKGGAAGRR GRRGSRGRRR ENSTTRP00000010743/1-545 --PPRPLTSP RSRRRQPDPR SWQERGCEGS DTMAVAAG-- ---------- bmy_22209T0/1-476 ---------- ---------- ---------- ---------- ---------- BACU011760/1-426 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000356057/1-612 -PGPGRLRGM DAEYPAFEPP LCSELKHLCR RLREAYRELK EDLTPFKDDR ENSBTAP00000014382/1-620 RRARAGGAGM DAEYPAFEPP LCSELKHLCK RLQEAYRELK EDLTPFRDDR ENSTTRP00000010743/1-545 -PGLARTRGA DAEYPAFEPP RRG------- ---------- ---------- bmy_22209T0/1-476 ---------- ---------- ---------- ---------- ---------- BACU011760/1-426 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000356057/1-612 YYRLAPMRLY TLSKRHFVLV FVVFFICFGL TIFVGIRGPK VIQTSAANFS ENSBTAP00000014382/1-620 YYRLAPMRLY TLSKHHFVLV FVVFFVCFGL TVFVGIRGPK VIQTSAANFS ENSTTRP00000010743/1-545 ---LAPMRLY TLSKRHFVLV FVVFFVCFGL TVFVGIRGPK VIQTSAANFS bmy_22209T0/1-476 ------MRSY ---EEGFPLQ ---------- -------GPK VIQTSAANFS BACU011760/1-426 ------MRLY TLSKRHFVLV FVVFFICFGL TVFVGIRGPK VIQTSAANFS 201 250 ENSP00000356057/1-612 LNNSKKLKPI QILSNPLSTY NQQLWLTCVV ELDQSKETSI KTSFPMTVKV ENSBTAP00000014382/1-620 LNNSKKLKPI QIFSKPLSTY NQQLWLTCVV ELDQSKETSI QTTFTMTVKV ENSTTRP00000010743/1-545 LNNSKELKPV QILSNPLSTY NQQLWLTCVV ELEHSKETAI QTNFTMTVKV bmy_22209T0/1-476 LNNSKELKPV QILSNPLSTY NQQLWLTCVV ELDHSKETAI QTNFTMTVKV BACU011760/1-426 LNNSKELKPV QILSNPLSTY NQQLWLTCVV ELDHSKETAI QTNFTMTVKV 251 300 ENSP00000356057/1-612 DGVAQDGTTM YIHNKVHNRT RTLTCAGKCA EIIVAHLGYL NYTQYTVIVG ENSBTAP00000014382/1-620 DGVAQDGTTK FIHNKVHNRT RTLTCAEKCA EIIVAHLSYL NYTKYTVTVG ENSTTRP00000010743/1-545 DGVAQDGTTM FIHNKVHNRT RTLTCAGKCA EIIVAHLSYL NYTQYTVTVG bmy_22209T0/1-476 DGVGQDGTTM FIHNKVHNRT RTLTCAGKCA EIIVAHLSYL NYTQYTVTVG BACU011760/1-426 DGVGQDGTTM FVHNKVHNRT RTLTCAGKCA EIIVAHLSYL NYTQYTVTVG 301 350 ENSP00000356057/1-612 FEHLKLPIKG MNFTWKTYNP AFSRLEIWFR FFFVVLTFIV TCLFAHSLRK ENSBTAP00000014382/1-620 FEHLKRPIKE MNFTWKTYDP AFSHLEIWFR FVFVVLTFIV TCLFAHSLRK ENSTTRP00000010743/1-545 FKHLKERIKE MNFTWKTYDP AFSHLEIWFR FVFVVLTFIV TCLFAHSLRK bmy_22209T0/1-476 FKHLKERIKE MNFTWKTYDP AFSHLEIWFR FVFVVLTFVV TCLFAHSLRK BACU011760/1-426 FKHLKERIKE MNFTWKTYDP AFSHLEIWFR FVFVVLTFVV TCLFAHSLRK 351 400 ENSP00000356057/1-612 FSMRDWGIEQ KWMSVLLPLL LLYNDPFFPL SFLVNSWLPG MLDDLFQSMF ENSBTAP00000014382/1-620 FSMRDWGIEQ KWMSILLPLL LLYNDPFFPL SFLVNSWFPG MLDDLFQSVF ENSTTRP00000010743/1-545 FSMRDWGIEQ KWMSILLPLL LLYNDPFFPL SFLVNSWFPG MLDDLFQSVF bmy_22209T0/1-476 FSMRDWGIEQ KWMSILLPLL LLYNDPFFPL SFLVNSWFPG MLDDLFQSVF BACU011760/1-426 FSMRDWGIEQ KWMSVLLPLL LLYNDPFFPL SFLVNSWFPG MLDDLFQSVF 401 450 ENSP00000356057/1-612 LCALLLFWLC VYHGIRVQGE RKCLTFYLPK FFIVGLLWLA SVTLGIWQTV ENSBTAP00000014382/1-620 LCALLLFWLC VYHGVRVQGE RKCLTFYLPK FFIVGLLWLA SVTLGIWQTV ENSTTRP00000010743/1-545 LCALLLFWLC VYHGIRVQGE RKCLTFYLPK CFIVGLLWLA CVTLGIWQTI bmy_22209T0/1-476 LCALLLFWLC VYHGIRVQGE RKCLTFYLPK FFIVGLLWLA CVTLGIWQTI BACU011760/1-426 LCALLLFWLC VYHGIRVQGE RKCLTFYLPK FFIVGLLWLA CVTLGIWQTI 451 500 ENSP00000356057/1-612 NELHDPMYQY RVDTGNFQGM KVFFMVVAAV YILYLLFLIV RACSELRHMP ENSBTAP00000014382/1-620 NELHDPMYQY RVDTGNFQGV KVFFMVVAVV YILYLLFLIV RACSELGHMP ENSTTRP00000010743/1-545 NELHDPMYQY RVDTGNFQGM KVFFMVVATM YILYLLFLIV RACSELRHMP bmy_22209T0/1-476 NELHDPMYQY RVDTGNFQGM KVFFMLVAAM YILYLLFLIV RACSELRHMP BACU011760/1-426 NELHDPMYQY RVDTGNFQGM KVFFMVVAAM YILYLLFLIV RACSELRHMP 501 550 ENSP00000356057/1-612 YVDLRLKFLT ALTFVVLVIS IAILYLRFGA QVLQDNFVAE LSTHYQNS-- ENSBTAP00000014382/1-620 YVDLRLKFLT ALTFVVLVIS IVILYLRFGA QVLQDNFVAE LSTHYQNY-- ENSTTRP00000010743/1-545 YVDLRLKFLT GLTFVVLVIS IVILYLRFGA QVLQDNFVAE LSTHYQNS-- bmy_22209T0/1-476 YVDLRLKFLT ALTFVVLIIS IVILYLRFGA QVLQDNFVAE LSTHYQNYIF BACU011760/1-426 YV-------- ---------- ---------- ---------- ---------- 551 600 ENSP00000356057/1-612 ---------- ---------- -----AEFLS FYGLLNFYLY TLAFVYSPSK ENSBTAP00000014382/1-620 ---------- ---------- -----TEFLS FYGLLNFYLY TLAFVYSPSK ENSTTRP00000010743/1-545 ---------- ---------- -----AEFLS FYGLLNFYLY TLAFVYSPSK bmy_22209T0/1-476 LWKDVRCQAH TPVEWVALQA CEMSPAEFLS FYGLLNFYLY TLAFVYSPSK BACU011760/1-426 ---------- ---------- --VSPAEFLS FYGLLNFYLY TLAFVYSPSK 601 650 ENSP00000356057/1-612 NALYESQLKD NPAFSMLNDS DDDVIYGSDY EEMPLQNGQA IRAKYKEESD ENSBTAP00000014382/1-620 NALYESQLKD NPAFSMLNDS DDDVIYGSDY EEMPLQNGQA IRAQYKEGSE ENSTTRP00000010743/1-545 NALYESQLKD NPAFSMLNDS DDDVIY---- ---------- ---------- bmy_22209T0/1-476 NALYESQLKD NPAFSMLNDS DDDVIYGSDY EEMPLQNGQA IRAQYKEGSE BACU011760/1-426 NALYESQLKD NPAFSMLNDS DDDVIYGSDY EEMPLQNGQA IRAQYKEGSE 651 700 ENSP00000356057/1-612 SD ENSBTAP00000014382/1-620 SD ENSTTRP00000010743/1-545 -- bmy_22209T0/1-476 SD BACU011760/1-426 SD