KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:53 2014 Check: 00 .. Name: ENSTTRP00000001012/1-427 Len: 442 Check: 1207 Weight: 1.00 Name: bmy_07364T0/1-277 Len: 442 Check: 1447 Weight: 1.00 Name: ENSP00000353915/1-428 Len: 442 Check: 7001 Weight: 1.00 Name: ENSBTAP00000014383/1-402 Len: 442 Check: 4074 Weight: 1.00 Name: BACU016010/1-364 Len: 442 Check: 1045 Weight: 1.00 // 1 50 ENSTTRP00000001012/1-427 MDELDANVSS KEGFGTVEKV VLLTFLSAVI LMAVLGNLLV MVAVCRDRQL bmy_07364T0/1-277 ------MPRH EGSVGSVPET ---------- ---------- ------EQTL ENSP00000353915/1-428 MDKLDANVSS EEGFGSVEKV VLLTFLSTVI LMAILGNLLV MVAVCWDRQL ENSBTAP00000014383/1-402 MDELDANVSS KAGFRSVEKV VLLTFLSAVI LMAILGNLLV MAAVCRDRQL BACU016010/1-364 ----MPNASS KEGFGSVEKV VLLTFLSAVI LMAVLGNLLV MVAVCRDRQL 51 100 ENSTTRP00000001012/1-427 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_07364T0/1-277 ---------- ---------- ---------- ---------- ---------- ENSP00000353915/1-428 RKIKTNYFIV SLAFADLLVS VLVMPFGAIE LVQDIWIYGE VFCLVRTSLD ENSBTAP00000014383/1-402 RKIKTNYFIV SLAFADLLVS VLVMPFGAIE LVQDIWIYGE MFCLVRTSLD BACU016010/1-364 RKIKTNYFIV SLAFADLLVS VLVMPFGAIE LVQDVWIYGE MFCLVRTSLD 101 150 ENSTTRP00000001012/1-427 XXXXXXXXXX XXXXXXXXYY AICCQPLVYR NKMTPLHIAL MLGGCWVIPL bmy_07364T0/1-277 ---------- -------RYY AICCQPLVYR NKMTPLRIAL MLGGCWVIPM ENSP00000353915/1-428 VLLTTASIFH LCCISLDRYY AICCQPLVYR NKMTPLRIAL MLGGCWVIPT ENSBTAP00000014383/1-402 VLLTTASIFH LCCISLDRYY AICCQPLVYR NKMTPLRIAL MLGGCWVIPM BACU016010/1-364 VLLTTASIFH LCCISLDRYY AICCQPLVYR NKMTPLRIAL MLGGCWVIPM 151 200 ENSTTRP00000001012/1-427 FISFLPIMQG WNNVGIIDL- ---------- ---IEKRKFN KNANSTYCIF bmy_07364T0/1-277 FISFLPIMQG WNNVGIIDLE RISKPRLGQD LHVIEKRKFX KNSNSTYCIF ENSP00000353915/1-428 FISFLPIMQG WNNIGIIDL- ---------- ---IEKRKFN QNSNSTYCVF ENSBTAP00000014383/1-402 FISFLPIMQG WNNIGIIDLE RISKPRLGQD LHVIEKRKFN QNSNSTYCIF BACU016010/1-364 FISFLPIMQG WNNVGIIDL- ---------- ---IEKRKFN KNSNSTYCIF 201 250 ENSTTRP00000001012/1-427 MVNKPYAITC SVVAFYIPFL LMVLAYYRIY VTAKGHAHQI QMLQRAGAPS bmy_07364T0/1-277 MVNKPYAITC SVVAFYIPFL LMVLAYYRIY VTAKEHAHQI QMLQRAGAPS ENSP00000353915/1-428 MVNKPYAITC SVVAFYIPFL LMVLAYYRIY VTAKEHAHQI QMLQRAGASS ENSBTAP00000014383/1-402 MVNKPYAITC SVVAFYIPFL LMVLAYYRIY VTAKEHAHQI QMLQRAGAPT BACU016010/1-364 MVNKPYAITC SVVAFYIPFL LMVLAYYRIY VTAKEHAHQI QMLQRAGAPS 251 300 ENSTTRP00000001012/1-427 EGRPQPTDQH STHRMRTETK AAKTLCIIMG CFCLCWAPFF VTNIVDPFVD bmy_07364T0/1-277 EGRPQPADQH STHRMRTETK AAKTLCIIMG CFCLCWAPFF VTNIVDPFVD ENSP00000353915/1-428 ESRPQSADQH STHRMRTETK AAKTLCIIMG CFCLCWAPFF VTNIVDPFID ENSBTAP00000014383/1-402 EGRLQPTDQH STHRMRTETK AAKTLCIIMG CFCLCWAPFF VTNIVDPFVD BACU016010/1-364 EGRPQPADQH STHRMRTETK AAKTLCIIMG CFCLCWAPFF VTNIVDPFVD 301 350 ENSTTRP00000001012/1-427 YTVPGQVWTA FLWLGYINSG LNPFLYAFLN KSFRHAFLII LCCDNERYRR bmy_07364T0/1-277 YTVPGQVWTA FLWLGYINSG LNPFLYAFLN KSFRRAFLII LCCDDERYRR ENSP00000353915/1-428 YTVPGQVWTA FLWLGYINSG LNPFLYAFLN KSFRRAFLII LCCDDERYRR ENSBTAP00000014383/1-402 YTVPGQVWTA FLWLGYINSG LNPFLYAFLN KSFRRAFLII LCCDDERYRR BACU016010/1-364 YTVPGQVWTA FLWLGYINSG LNPFLYAFLN KSFRRAFLII LCCDDERYRR 351 400 ENSTTRP00000001012/1-427 PSVLGQTVPC STTTINGSTH VLRTDLLLDR DISAKHYTKP SRVGPFSGT- bmy_07364T0/1-277 PSILGQTVPC STTTINGSTH VLR------- ---------- ---------- ENSP00000353915/1-428 PSILGQTVPC STTTINGSTH VLRTDFLFDR DILARYWTKP ARAGPFSGTL ENSBTAP00000014383/1-402 PSILGQTVPC STTTINGSTH VLR------- ---------- ---------- BACU016010/1-364 PSILGQTVPC STTTINGSTH VLR------- ---------- ---------- 401 450 ENSTTRP00000001012/1-427 GIVCLLGRQS VVGDAVECGG QWESQSHPPT TSSLVAAQPS DT bmy_07364T0/1-277 ---------- ----YVQ--- ---------- ---------- -- ENSP00000353915/1-428 SIRCLTARKP VLGDAVECGG QWESQCHPPA TSPLVAAQPS DT ENSBTAP00000014383/1-402 ---------- ---DAVECGG QWESQSHPPA SSPLVAAQPS DT BACU016010/1-364 ---------- -----IPC-- ----EKNPPT ---------- --