KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:52:55 2014 Check: 00 ..
Name: ENSBTAP00000014402/1-352 Len: 433 Check: 2118 Weight: 1.00
Name: ENSP00000355979/1-356 Len: 433 Check: 2905 Weight: 1.00
Name: bmy_12964T0/1-428 Len: 433 Check: 4721 Weight: 1.00
Name: BACU019863/1-357 Len: 433 Check: 7296 Weight: 1.00
Name: ENSTTRP00000011211/1-349 Len: 433 Check: 9165 Weight: 1.00
//
1 50
ENSBTAP00000014402/1-352 ---------- ---------- ---------- ---------- ----------
ENSP00000355979/1-356 ---------- ---------- ---------- ---------- ----------
bmy_12964T0/1-428 FISQCFDWRQ IQFRPIRAGG NNYQVCLCLL RFGRRKWREP QNVVEELALQ
BACU019863/1-357 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000011211/1-349 ---------- ---------- ---------- ---------- ----------
51 100
ENSBTAP00000014402/1-352 ---------- ---------- ----MTLVLS MNRFCEPIVS EGAAEIAGYQ
ENSP00000355979/1-356 ---------- ---------- ----MTLVLS MNRFCEPIVS EGAAEIAGYQ
bmy_12964T0/1-428 KQRKRGQRAA EQTEPESINL RLSEMTLVLS MNRFCEPIVS EGAAEIAGYQ
BACU019863/1-357 ---------- ---------- ----MTLVLS MNRFCEPIVS EGAAEIAGYQ
ENSTTRP00000011211/1-349 ---------- ---------- ----MTLVLS MNRFCEPIVS EGAAEIAGYQ
101 150
ENSBTAP00000014402/1-352 TLWEADSYGG LSPPGPAQAP LQGDRGAGPP LAGSHYRGIS NPITTSKITY
ENSP00000355979/1-356 TLWEADSYGG PSPPGPAQAP LQGDRGAGPP LAGSHYRGIS NPITTSKITY
bmy_12964T0/1-428 TLWEADSYGG PSPPGPAQAP LQGDRGAGPP LAGSHYRGIS NPITTSKITY
BACU019863/1-357 TLWEADSYGG PSPPGPAQAP LQGDRGAGLP LAGSHYRGIS NPITTSKITY
ENSTTRP00000011211/1-349 TLWEADSYGG PSPPGPAQAP LQGDRGAGPP LAGSHYRGIS NPITTSKITY
151 200
ENSBTAP00000014402/1-352 FKRKYVEEED FHPPLSSCSH KTISIFEERA HILYMSLEKL KFIDDPEVYL
ENSP00000355979/1-356 FKRKYVEEED FHPPLSSCSH KTISIFEERA HILYMSLEKL KFIDDPEVYL
bmy_12964T0/1-428 FKRKYVEEED FHPPLSSCSH KTISIFEERA HILYMSLEKL KFIDDPEVYL
BACU019863/1-357 FKRKYVEEED FHPPLSSCSH KTISIFEERA HILYMSLEKL KFIDDPEVYL
ENSTTRP00000011211/1-349 FKRKYVEEED FHPPLSSCSH KTISIFEERA HILYMSLEKL KFIDDPEVYL
201 250
ENSBTAP00000014402/1-352 RRSVLINNLM KRIHGEIIMQ NNWCFPACSF NGASAQEWFM AQDCPYRKRP
ENSP00000355979/1-356 RRSVLINNLM KRIHGEIIMQ NNWCFPACSF NGTSAQEWFM AQDCPYRKRP
bmy_12964T0/1-428 RRSVLINNLM KRIHGEIIMQ NNWCFPACSF NGTSAQEWFM AQDCPYRKRP
BACU019863/1-357 RRSVLINNLM KRIHGEIIMQ NNWCFPACSF NGTSAQEWFM AQDCPYRKRP
ENSTTRP00000011211/1-349 RRSVLINNLM KRIHGEIIMQ NNWCFPACSF NGTSAQEWFM AQDCPYRKRP
251 300
ENSBTAP00000014402/1-352 RMAKEECEKF HACCLYQECG GHYLNLPLSV NANVGSASTT A------SSS
ENSP00000355979/1-356 RMAKEECEKF HACCFYQECG GHYLNLPLSV NANVGSASTA A---SSPSAS
bmy_12964T0/1-428 RMAKEECEKF HACCLYQECG GHYLNLPLSV NANVGNASTT A---SSSSSS
BACU019863/1-357 RMAKEECEKF HACCLYQECG GHYLNLPLSV NANVGNASTT ASSSSSSSSS
ENSTTRP00000011211/1-349 RMAKEECEKF HACCLYQECG GHYLNLPLSV NANVGNASTT A--------S
301 350
ENSBTAP00000014402/1-352 SPSSSSSSSP PLPLPSCSQQ VDFDIGSAPV YKGDGQIPAS EIFVTNVRSL
ENSP00000355979/1-356 SSSSSSSSSP PLPLPSCSRQ VDFDVGSASI YKSDGQIPAN EIFVTNVRSL
bmy_12964T0/1-428 SSSSSSSSSP PLPLPSCSHQ VDFDVGSAPI YKGDGQIPAN EIFVTNVRSL
BACU019863/1-357 SSSSSSSSSP PLPLPSCSHQ VDFDVGSAPI YKGDGQIPAN EIFVTNVRSL
ENSTTRP00000011211/1-349 SSSSSSSSSP PLPLPSCSHQ VDFDVGSAPI YKGDGQIPAN EIFVTNVRSL
351 400
ENSBTAP00000014402/1-352 GVQEKAKLND EKVNDDTNRD GGPLSHGPVG NDLAFEGKGQ FYDYFETGYN
ENSP00000355979/1-356 GVQEKAKLND EKANDDTNRD GGPLSHEPVG NDLAFECKGQ FYDYFETGYN
bmy_12964T0/1-428 GVQEKAKLN- EKANDDTNRD GGPLSHEPVG NDLAFECKGQ FYDYFETGYN
BACU019863/1-357 GVQEKAKLN- EKANDDTNRD GGPLSHEPVG NDLAFECKGQ FYDYFETGYN
ENSTTRP00000011211/1-349 GVQEKAKLN- EKANDDTNRD GGPLSHEPVG NDLAFECKGQ FYDYFETGYN
401 450
ENSBTAP00000014402/1-352 EKSNVSESWK KSLRKKEPS- PSNKLCCSKG SKI
ENSP00000355979/1-356 ERNNVNESWK KSLRKKEASP PSNKLCCSKG SKI
bmy_12964T0/1-428 EKSNVSESWK KSLRKKEPS- PSNKLCCSKG SKI
BACU019863/1-357 EKSNVSESWK KSLRKKEPS- PSNKLCCSKG SKI
ENSTTRP00000011211/1-349 EKSNVSESWK KSLRKKEPS- PSNKLCCSKG SKI