KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:52:55 2014  Check: 00 ..

 Name: ENSP00000322524/1-170     Len:    173  Check:  393  Weight:  1.00
 Name: BACU011931/1-171          Len:    173  Check:  1858  Weight:  1.00
 Name: ENSBTAP00000014406/1-169  Len:    173  Check:  1279  Weight:  1.00
 Name: bmy_00753T0/1-170         Len:    173  Check:  2332  Weight:  1.00
 Name: ENSTTRP00000016373/1-136  Len:    173  Check:  3403  Weight:  1.00

//


                          1                                                   50
ENSP00000322524/1-170     MSVAGGEIRG DTGGEDT-AA PGRFSFSPEP TLEDIRRLHA EFAAERDWEQ 
BACU011931/1-171          -MSARGETRG DAGGEGT-AA AAPFSFSSEP TLEDIRRLHA EFAAERDWDQ 
ENSBTAP00000014406/1-169  -MSASEEMLG GARGEST-TA TGPFSFSSEP TLEDIRRLHA EFAAERDWEQ 
bmy_00753T0/1-170         -MSAGGETRG DAGGECTAAA AAPFSFSSEP TLEDIRRLHA EFAAERDWDQ 
ENSTTRP00000016373/1-136  ---------- ---------- ---------- -----RRLHA EFAAERDWDQ 


                          51                                                 100
ENSP00000322524/1-170     FHQPRNLLLA LVGEVGELAE LFQWKTDGEP GPQGWSPRER AALQEELSDV 
BACU011931/1-171          FHQPQNLLLA LVGEVGELAE LFQWKPDEEP GPQAWPPRER AALQEELSDV 
ENSBTAP00000014406/1-169  FHQPRNLLLA LVGEVGELAE LFQWKPDEEP GPQAWSPRER AALQEELSDV 
bmy_00753T0/1-170         FHQPRNLLLA LVGEVGELAE LFQWKPDEEP GPQAWPPREQ AALQEELSDV 
ENSTTRP00000016373/1-136  FHQPRNLLLA LVGEVGELAE LFQWKPDEEP GPQAWPPRER AALQEELSDV 


                          101                                                150
ENSP00000322524/1-170     LIYLVALAAR CRVDLPLAVL SKMDINRRRY PAHLARSSSR KYTELPHGAI 
BACU011931/1-171          LIYLVALAAR CRVDLPRAVL SKMDTNRRRY PAHLSCGSAR KYTDLPHGAT 
ENSBTAP00000014406/1-169  LIYLVALAAR CRVDLPQAVL CKMDTNRRRY PVHLSRGSAC KYTDLPHGAT 
bmy_00753T0/1-170         LIYLVALAAR CRVDLPRAVL SKMDTNRRRY PAHLSRGSAR KYTDLPHGAT 
ENSTTRP00000016373/1-136  LIYLVALAAR CRVDLPRAVL SKMDTNRRRY PVHLSRGSAR KYTDLPHGAT 


                          151                                                200
ENSP00000322524/1-170     SEDQAVGPAD IPCDSTGQTS T-- 
BACU011931/1-171          SENQAVGPAD LACKRESIRL ELL 
ENSBTAP00000014406/1-169  SENQAMGPAD PASESTGQVS T-- 
bmy_00753T0/1-170         SENQAVGPAD LACESTGQAS T-- 
ENSTTRP00000016373/1-136  SENQAVGPAD LACESTGQAS T--