KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:56 2014 Check: 00 .. Name: ENSTTRP00000002145/1-920 Len: 995 Check: 3976 Weight: 1.00 Name: ENSP00000236877/1-921 Len: 995 Check: 866 Weight: 1.00 Name: ENSBTAP00000014410/1-922 Len: 995 Check: 4071 Weight: 1.00 Name: BACU002154/1-955 Len: 995 Check: 187 Weight: 1.00 Name: bmy_06605T0/1-904 Len: 995 Check: 5438 Weight: 1.00 // 1 50 ENSTTRP00000002145/1-920 MATLALVGFA LLLGTPPCSG AATPTPSLPP PPANDSDASS MGGCQGSNRC ENSP00000236877/1-921 MAPLALVGVT LLLAAPPCSG AATPTPSLPP PPANDSDTS- TGGCQGSYRC ENSBTAP00000014410/1-922 MAPLALVGFA LLLGTPPCSG AATPTPSLPP PPANDSDASS TGGCQGSNRC BACU002154/1-955 ---------- ---------- ---------- ---------- MGGCQGSNRC bmy_06605T0/1-904 MAPLALVGFA LLLGTPPCSG AATPTPSLPP PPANDSDASS MGGCQGSNRC 51 100 ENSTTRP00000002145/1-920 QPGVLLPVWE PDDPSLGDKA ARAVVYFVAM VYMFLGVSII ADRFMASIEV ENSP00000236877/1-921 QPGVLLPVWE PDDPSLGDKA ARAVVYFVAM VYMFLGVSII ADRFMAAIEV ENSBTAP00000014410/1-922 QPGVLLPVWE PDDPSLGDKA ARAVVYFVAM VYMFLGVSII ADRFMASIEV BACU002154/1-955 QPGVLLPVWE PDDPSLGDKA ARAVVYFVAM VYMFLGVSII ADRFMASIEV bmy_06605T0/1-904 QPGVLLPVWE PDDPSLGDKA ARAVVYFVAM VYMFLGVSII ADRFMASIEV 101 150 ENSTTRP00000002145/1-920 ITSKEKEITI TKSNGETSVG TVRIWNETVS NLTLMALGSS APEILLSVIE ENSP00000236877/1-921 ITSKEKEITI TKANGETSVG TVRIWNETVS NLTLMALGSS APEILLSVIE ENSBTAP00000014410/1-922 ITSKEKEITI TKANGETSVG TVRIWNETVS NLTLMALGSS APEILLSVIE BACU002154/1-955 ITSKEKEITI TKSNGETSVG TVRIWNETVS NLTLMALGSS APEILLSVIE bmy_06605T0/1-904 ITSKEKEITI TKSNGETSVG TVRIWNETVS NLTLMALGSS APEILLSVIE 151 200 ENSTTRP00000002145/1-920 VCGHNFQAGE LGPGTIVGSA AFNMFVVIAV CIYVIPAGES RKIKHLRVFF ENSP00000236877/1-921 VCGHNFQAGE LGPGTIVGSA AFNMFVVIAV CIYVIPAGES RKIKHLRVFF ENSBTAP00000014410/1-922 VCGHNFQAGE LGPGTIVGSA AFNMFVVIAV CIYVIPAGES RKIKHLRVFF BACU002154/1-955 VCGHNFQAGE LGPGTIVGSA AFNMFVVIAV CIYVIPAGES RKIKHLRVFF bmy_06605T0/1-904 VCGHNFQAGE LGPGTIVGSA AFNMFVVIAV CIYVIPAGES RKIKHLRVFF 201 250 ENSTTRP00000002145/1-920 VTASWSIFAY VWLYLILAVF SPGVVQVWEA LLTLVFFPVC VVFAWMADKR ENSP00000236877/1-921 VTASWSIFAY VWLYLILAVF SPGVVQVWEA LLTLVFFPVC VVFAWMADKR ENSBTAP00000014410/1-922 VTASWSIFAY VWLYLILAVF SPGVVQVWEA LLTLVFFPVC VVFAWMADKR BACU002154/1-955 VTASWSIFAY VWLYLILAVF SPGVVQVWEA LLTLVFFPVC VVFAWMADKR bmy_06605T0/1-904 VTASWSIFAY VWLYLILAVF SPGVVQVWEA LLTLVFFPVC VVFAWMADKR 251 300 ENSTTRP00000002145/1-920 LLFYKYVYKR YRTDPRSGII IGAEGDPPKS IELDGTFLGA EAPGEVGGLG ENSP00000236877/1-921 LLFYKYVYKR YRTDPRSGII IGAEGDPPKS IELDGTFVGA EAPGELGGLG ENSBTAP00000014410/1-922 LLFYKYVYKR YRTDPRSGII IGAEGDPPKS IELDGTFVGA EAPGEVGGLG BACU002154/1-955 LLFYEYVYKR YRTDPRSGII IGAEGDPPKS IELDGTFLGA EAPGEVGGLG bmy_06605T0/1-904 LLFYKYVYKR YRTDPRSGII IGAEGDPPKS IELDGTFLGA EAPGEVGGLG 301 350 ENSTTRP00000002145/1-920 PGPAEARELD ASRREVIHIL KDLLHNLPDM DLD-LVGIAN YYSLLHQQKS ENSP00000236877/1-921 PGPAEARELD ASRREVIQIL KDLKQKHPDK DLEQLVGIAN YYALLHQQKS ENSBTAP00000014410/1-922 PGPAEARELD ASRREVIQIL KDLKQKHPDK ELEQLVGIAN YYALLHQQKS BACU002154/1-955 PGPAEARELD TSRREVIQIL KDLKQKHPDK DLEQLVGIAN YYALLHQQKS bmy_06605T0/1-904 PGPAEARELD ASRREVIQIL KDLKQKHPDK DLEQLVGIAN YYALLHQQKS 351 400 ENSTTRP00000002145/1-920 RAFYRIQATL LMTGAGNVLR RHAVYASRRS TSVECSGED- DDGVIRIFFE ENSP00000236877/1-921 RAFYRIQATR LMTGAGNVLR RHAADASRRA APAEGAGEDE DDGASRIFFE ENSBTAP00000014410/1-922 RAFYRIQATR LMTGAGNVLR RHAVDASRRA TPADGPGEDE DDGASRIFFE BACU002154/1-955 RAFYRIQATR LMTGAGNVLR RHAVDASRRA TLAEGPGEDE DDGASRIFFE bmy_06605T0/1-904 RAFYRIQATR LMTGAGNVLR RHAVDASRRA TLAEGPGEDE DDGASRIFFE 401 450 ENSTTRP00000002145/1-920 PSLYHCLENC GSVLLSVICQ GGEGNCTFYV DXXXXXXXXX XXXXXXXXEG ENSP00000236877/1-921 PSLYHCLENC GSVLLSVTCQ GGEGNSTFYV DYRTEDGSAK AGSDYEYSEG ENSBTAP00000014410/1-922 PSLYHCLENC GSVLLSVTCQ GGEGNSTFYV DYRTEDGSAK AGSDYEYSEG BACU002154/1-955 PSLYHCLENC GSVLLSVTCQ GGEGNSTFYV DYRTEDGSAK AGSDYEYSEG bmy_06605T0/1-904 PSLYHCLENC GSVLLSVTCQ GGEGNSTFYV DYRTEDGSAK AGSDYEYSEG 451 500 ENSTTRP00000002145/1-920 TLVFKPGETL KELRIGIIDD DIFEEDEHFF VRLLNLRVGD AQGMFEPDGG ENSP00000236877/1-921 TLVFKPGETQ KELRIGIIDD DIFEEDEHFF VRLLNLRVGD AQGMFEPDGG ENSBTAP00000014410/1-922 TLVFKPGETL KELRIGIIDD DIFEEDEHFF VRLLNLRVGD AQGMFEPDGG BACU002154/1-955 TLVFKPGETQ KELRIGIIDD DIFEEDEHFF VRLLNLRVGD AQGMFEPDGG bmy_06605T0/1-904 TLVFKPGETQ KELRIGIIDD DIFEEDEHFF VRLLNLRVGD AQGMFEPDGG 501 550 ENSTTRP00000002145/1-920 GRPKGRLVAP LLATVTILDD DHAGIFSFQD RLLHVSECMG TVDVRVVRSS ENSP00000236877/1-921 GRPKGRLVAP LLATVTILDD DHAGIFSFQD RLLHVSECMG TVDVRVVRSS ENSBTAP00000014410/1-922 GRPKGRLVSP LLATVTILDD DHAGIFSFQD RLLHVSECMG TVDVRVVRSS BACU002154/1-955 GRPKGRLVAP LLATVTILDD DHAGLFSFQD RLLHVSECMG TVDVRVVRSS bmy_06605T0/1-904 GRPKGRLVAP LLATVTILDD DHAGIFSFQD RLLHVSECMG TVDVRVVRSS 551 600 ENSTTRP00000002145/1-920 GARGTVRLPY RTVDGTARGG GVHYEDACGE LEFGDDETMK TLQVKIVDDE ENSP00000236877/1-921 GARGTVRLPY RTVDGTARGG GVHYEDACGE LEFGDDETMK TLQVKIVDDE ENSBTAP00000014410/1-922 GARGTVRLPY RTVDGTARGG GVHYEDACGE LEFGDDETMK TLQVKIVDDE BACU002154/1-955 GARGTVRLPY RTVDGTARGG GVHYEDACGE LEFGDDETMK TLQVKIVDDE bmy_06605T0/1-904 GARGTVRLPY RTVDGTARGG GVHYEDACGE LEFGDDETMK TLQVKIVDDE 601 650 ENSTTRP00000002145/1-920 EYEKKDNFFI ELGQPQWLKR GISALLLSQG DGDRKLTAEE EEARRIAEMG ENSP00000236877/1-921 EYEKKDNFFI ELGQPQWLKR GISALLLNQG DGDRKLTAEE EEARRIAEMG ENSBTAP00000014410/1-922 EYEKKDNFFI ELGQPQWLKR GISALLLNQG DGDRKLTAEE EEAQRIAEMG BACU002154/1-955 EYEKKDNFFI ELGQPQWLKR GISALLLNQG DGDRKLTAEE EEARRIAEMG bmy_06605T0/1-904 EYEKKDNFFI ELGQPQWLKR GISALLLNQ- ---------- -------EMG 651 700 ENSTTRP00000002145/1-920 KPVLGENCRL EVIIEESYDF KNTVDKLIKK TNLALVIGTH SWREQFLEAI ENSP00000236877/1-921 KPVLGENCRL EVIIEESYDF KNTVDKLIKK TNLALVIGTH SWREQFLEAI ENSBTAP00000014410/1-922 KPVLGENCRL EVIIEESYDF KNTVDKLIKK TNLALVIGTH SWREQFLEAI BACU002154/1-955 KPVLGENCRL EVIIEESYDF KNTVDKLIKK TNLALVIGTH SWREQFLEAI bmy_06605T0/1-904 KPVLGENCRL EVIIEESYDF KNTVDKLIKK TNLALVIGTH SWREQFLEAI 701 750 ENSTTRP00000002145/1-920 TVSAGDEEEE EDGSREERLP SCFDYVMHFL TVFWKVLFAC VPPTEYCHGW ENSP00000236877/1-921 TVSAGDEEEE EDGSREERLP SCFDYVMHFL TVFWKVLFAC VPPTEYCHGW ENSBTAP00000014410/1-922 TVSAGDEEEE EDGSREERLP SCFDYVMHFL TVFWKVLFAC VPPTEYCHGW BACU002154/1-955 TVSAGDEEEE EDGSREERLP SCFDYVMHFL TVFWKVLFAC VPPTEYCHGW bmy_06605T0/1-904 TVSAGDEEEE EDGSREERLP SCFDYVMHFL TVFWKVLFAC VPPTEYCHGW 751 800 ENSTTRP00000002145/1-920 ACFGVCILVI GLLTALIGDL ASHFGCTVGL KDSVNAVVFV ALGTSIPDTF ENSP00000236877/1-921 ACFGVSILVI GLLTALIGDL ASHFGCTVGL KDSVNAVVFV ALGTSIPDTF ENSBTAP00000014410/1-922 ACFGVCILVI GLLTALIGDL ASHFGCTVGL KDSVNAVVFV ALGTSIPDTF BACU002154/1-955 ACFGVCILVI GLLTALIGDL ASHFGCTVGL KDSVNAVVFV ALGTSIPDTF bmy_06605T0/1-904 ACFGVCILVI GLLTALIGDL ASHFGCTVGL KDSVNAVVFV ALGTSIPDTF 801 850 ENSTTRP00000002145/1-920 ASKVAALQDQ CADASI---- ---------- ---------- ---------- ENSP00000236877/1-921 ASKVAALQDQ CADASI---- ---------- ---------- ---------- ENSBTAP00000014410/1-922 ASKVAALQDQ CADASI---- ---------- ---------- ---------- BACU002154/1-955 ASKVAALQDQ CADASIGNVT GSNAVNVFLG LGVAWSVAAV YWAVQGRPFE bmy_06605T0/1-904 ASKVAALQDQ CADASI---- ---------- ---------- ---------- 851 900 ENSTTRP00000002145/1-920 ---------- ---------- ---------- ---------G NVTGSNAVNV ENSP00000236877/1-921 ---------- ---------- ---------- ---------G NVTGSNAVNV ENSBTAP00000014410/1-922 ---------- ---------- ---------- ---------G NVTGSNAVNV BACU002154/1-955 VRTGTLAFSV TLFTVFAFVG IAVLLKVAAL QDQCADASIG NVTGSNAVNV bmy_06605T0/1-904 ---------- ---------- ---------- ---------G NVTGSNAVNV 901 950 ENSTTRP00000002145/1-920 FLGLGVAWSV AAVYWAVQGR PFEVRTGTLA FSVTLFTVFA FVGIAVLLYR ENSP00000236877/1-921 FLGLGVAWSV AAVYWAVQGR PFEVRTGTLA FSVTLFTVFA FVGIAVLLYR ENSBTAP00000014410/1-922 FLGLGVAWSV AAVYWAVQGR PFEVRTGTLA FSVTLFTVFA FVGIAVLLYR BACU002154/1-955 FLGLGVAWSV AAVYWAVQGR PFEVRTGTLA FSVTLFTVFA FVGIAVLLYR bmy_06605T0/1-904 FLGLGVAWSV AAVYWAVQGR PFEVRTGTLA FSVTLFTVFA FVGIAVLLYR 951 1000 ENSTTRP00000002145/1-920 RRPHIGGELG GPRGPKLATT ALFLGLWFLY ILFASLEAYC HIRGF ENSP00000236877/1-921 RRPHIGGELG GPRGPKLATT ALFLGLWLLY ILFASLEAYC HIRGF ENSBTAP00000014410/1-922 RRPHIGGELG GPRGPKLATT ALFLGLWFLY ILFASLEAYC HIRGF BACU002154/1-955 RRPHIGGELG GPRGPKLATT ALFLGLWFLY ILFASLEAYC HIRGF bmy_06605T0/1-904 RRPHIGGELG GPRGPKLATT ALFLGLWFLY ILFASLEAYC HIRGF