KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:52:56 2014 Check: 00 .. Name: ENSTTRP00000007688/1-532 Len: 586 Check: 9567 Weight: 1.00 Name: ENSP00000475920/1-584 Len: 586 Check: 9706 Weight: 1.00 Name: bmy_09138T0/1-373 Len: 586 Check: 6924 Weight: 1.00 Name: ENSBTAP00000014415/1-579 Len: 586 Check: 7530 Weight: 1.00 // 1 50 ENSTTRP00000007688/1-532 ---------- ---------- ---------- ---------- -----EKTDI ENSP00000475920/1-584 MEALSRAGQE MSLAALKQHD PYITSIADLT GQVALYTFCP KANQWEKTDI bmy_09138T0/1-373 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014415/1-579 MESLSRAGQE MSLAALKQHD PYITSIADLT GQVALYTFCP KANQWEKTDI 51 100 ENSTTRP00000007688/1-532 EGTLFVYRXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000475920/1-584 EGTLFVYRRS ASPYHGFTIV NRLNMHNLVE PVNKDLEFQL HEPFLLYRNA bmy_09138T0/1-373 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014415/1-579 EGTLFVYRRS ASPYHGFTIV NRLNMHNLVE PVNKDLEFQL HEPFLLYRNA 101 150 ENSTTRP00000007688/1-532 XXSIYSIWFY DKNDCHRIAK LMADVVEEET RRSQQAARDK QSPSQANGCS ENSP00000475920/1-584 SLSIYSIWFY DKNDCHRIAK LMADVVEEET RRSQQAARDK QSPSQANGCS bmy_09138T0/1-373 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014415/1-579 SLSIYSIWFY DKNDCHRIAK LMADVVEEET RRSQQAARDK QSPSQANGCS 151 200 ENSTTRP00000007688/1-532 DHRPIDILEM LSRAKDEYER NQMGNSNISS PGLQPSTQIS NLGSTETLEE ENSP00000475920/1-584 DHRPIDILEM LSRAKDEYER NQMGDSNISS PGLQPSTQLS NLGSTETLEE bmy_09138T0/1-373 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014415/1-579 DHRPIDILEM LSRAKDEYER NQMGDSNISS PGLQPSTQIS NLGSTETLEE 201 250 ENSTTRP00000007688/1-532 MPSGSQDKSA PSGHKHLTVE ELFGTSLPKE QPTVFGLDSE EVEKLPGDAS ENSP00000475920/1-584 MPSGSQDKSA PSGHKHLTVE ELFGTSLPKE QPAVVGLDSE EMERLPGDAS bmy_09138T0/1-373 --------SA PSGHKHLTVE ELFGTSLPKE QPTVLGLDSE EVEKLPGDAS ENSBTAP00000014415/1-579 TPSGLQDKSA PSGHKHLTVE ELFGTSLSKE QPAVVGLDSE EVEKLPGDAS 251 300 ENSTTRP00000007688/1-532 QKEPSSFLPF SFEP-GGAPQ SEN-GVHPA- -AHHSVQPEV XXXXXXXXXX ENSP00000475920/1-584 QKEPNSFLPF PFEQLGGAPQ SETLGVPSA- -AHHSVQPEI TTPVLITPAS bmy_09138T0/1-373 QKEPSSFLPF SFEP-GGAPP SENLGVHPAA HAHHSVQPEV TTPVLITPAS ENSBTAP00000014415/1-579 QKEPNSFLPF SFEP-GGAPQ SENLGVHPA- -AHPSVQPEV TTPVLITPAS 301 350 ENSTTRP00000007688/1-532 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000475920/1-584 ITQSNEKHAP TYTIPLSPVL SPTLPAEAPT AQVPPSLPRN STMMQAVKTT bmy_09138T0/1-373 ITQSSEKQAP SYAIPLHPVL SPTLPAEAST GQAPPSLPRN TTMMQAVKTT ENSBTAP00000014415/1-579 ITQSSEKQAP SYAIPLHSVL SPSLPAEAST GQAPPSLPRK TTMMQTVKTA 351 400 ENSTTRP00000007688/1-532 XXXXXXXXXX XXXXXXXXXX XASQSPFRAP LSVTNTAGTS LTSVD-LQKL ENSP00000475920/1-584 PRQRSPLLNQ PVPELSHASL IANQSPFRAP LNVTNTAGTS LPSVDLLQKL bmy_09138T0/1-373 PRQRSPLLSQ PVPELSHTSL TASQSPFRAP LSVTNTAGTS LPSVDLLQKL ENSBTAP00000014415/1-579 PRQRSPLLSQ PVPELSHASL TASQSPFRAP LSVTNTTSPS LPSVDLLQKL 401 450 ENSTTRP00000007688/1-532 RLTPQHDQIQ TQSLGKGAVA PSFSAAAGQL ATRESFIEPP TKTAAAR--A ENSP00000475920/1-584 RLTPQHDQIQ TQPLGKGAMV ASFSPAAGQL ATPESFIEPP SKTAAARVAA bmy_09138T0/1-373 RLTPQHDQIQ TQSLGKGAVA PSFSAAAGQL ATPESFIEPP TKTAAAR--A ENSBTAP00000014415/1-579 RLTPQHDQIQ PQSLGKGSAA PSFSPAAGQL ATPESFIEPS PKATAAR--A 451 500 ENSTTRP00000007688/1-532 SASLSNMVLA PLQSMQQNQD PEVFAQPMML S--SAIPVAG PPLVRATTSA ENSP00000475920/1-584 SASLSNMVLA PLQSMQQNQD PEVFVQPKVL SSASAIPVAG APLVTATTTA bmy_09138T0/1-373 SASLSNMVLA PLQSMQQNQD PEVFAQPKML S--SAIPVAG PPLVPATTSA ENSBTAP00000014415/1-579 PASLSNMVLA PLQSMQQNQD PEVFAQPKVL S--SAIPVAS SPLVPATTSA 501 550 ENSTTRP00000007688/1-532 VSSVVLSPSV FQQTVTRSSD LERKASSPSP LTVGTSENQR KPSIILSKSQ ENSP00000475920/1-584 VSSVLLAPSV FQQTVTRSSD LERKASSPSP LTIGTPESQR KPSIILSKSQ bmy_09138T0/1-373 VSSVLLSPSV FQQTVTRSSD LERKASSPSP LTVGTSENQR KPSIILSKSQ ENSBTAP00000014415/1-579 APSVLLSPSV FQQTVTRSSD LERKASSPSP LTVGTTENQR KPSIILSKSQ 551 600 ENSTTRP00000007688/1-532 LQDTLIHLIK NDSSFLSTLH EVYLQVLTKN KDSHNL ENSP00000475920/1-584 LQDTLIHLIK NDSSFLSTLH EVYLQVLTKN KDNHNL bmy_09138T0/1-373 LQDTLIHLIK NDSSFLSTLH EVYLQVLTKN KDNHNL ENSBTAP00000014415/1-579 LQDTLIHLIK NDSSFLSTLH EVYLQVLTKN RDNHNL