KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:58 2014 Check: 00 .. Name: bmy_15446T0/1-737 Len: 1081 Check: 5338 Weight: 1.00 Name: ENSBTAP00000014427/1-852 Len: 1081 Check: 6175 Weight: 1.00 Name: ENSP00000285737/1-852 Len: 1081 Check: 7145 Weight: 1.00 Name: BACU001888/1-1081 Len: 1081 Check: 3254 Weight: 1.00 Name: ENSTTRP00000014405/1-852 Len: 1081 Check: 8441 Weight: 1.00 // 1 50 bmy_15446T0/1-737 MSSLSPIQIP SRLPLLLTHE GVLLPGSTMR TSVDSARNLQ LVRSRLLKGT ENSBTAP00000014427/1-852 MSSVSPIQIP SRLPLLLTHE GVLLPGSTMR TSVDSARNLQ LVRSRLLKGT ENSP00000285737/1-852 MSSVSPIQIP SRLPLLLTHE GVLLPGSTMR TSVDSARNLQ LVRSRLLKGT BACU001888/1-1081 MSSLSPIQIP SRLPLLLTHE GVLLPGSTMR TSVDSARNLQ LVRSRLLKGT ENSTTRP00000014405/1-852 MSSLSPIQIP SRLPLLLTHE GVLLPGSTMR TSVDSARNLQ LVRSRLLKGT 51 100 bmy_15446T0/1-737 SLQSTILGVI PNTPDPASDA QDLPPLHRIG TAALAVQVVG SNWPKPHYTL ENSBTAP00000014427/1-852 SLQSTILGVI PNTPDPASDA QDLPPLHRIG TAALAVQVVG SNWPKPHYTL ENSP00000285737/1-852 SLQSTILGVI PNTPDPASDA QDLPPLHRIG TAALAVQVVG SNWPKPHYTL BACU001888/1-1081 SLQSTILGLI PNTPDPASDA QDLPPLHRIG TAALAVQVVG SNWPKPHYTL ENSTTRP00000014405/1-852 SLQSTILGVI PNTPDPASDA QDLPPLHRIG TAALAVQVVG SNWPKPHYTL 101 150 bmy_15446T0/1-737 LITGLCRFQI VQVIKEKPYP VAKVEQLDWL EEFPNTCKTR EELGELSEQF ENSBTAP00000014427/1-852 LITGLCRFQI TQVVREKPYP VAEVEQLDRL EEFPNTCKTR EELGELSEQF ENSP00000285737/1-852 LITGLCRFQI VQVLKEKPYP IAEVEQLDRL EEFPNTCKMR EELGELSEQF BACU001888/1-1081 LITGLCRFQI VQVIKEKPYP VAKVEQLDWL EEFPNTCKTR EELGELSEQF ENSTTRP00000014405/1-852 LITGLCRFQI VQVIKEKPYP VAKVEQLDWL EEFPNTCKTR EELGELSEQF 151 200 bmy_15446T0/1-737 YKYAVQLVEM LDMSVPAVAK LRRLLDSLPR EALPDILTSI IRTSNKEKLQ ENSBTAP00000014427/1-852 YKYAVQLVEM LDMSVPAVAK LRRLLDSLPR EALPDILTSI IRTSNKEKLQ ENSP00000285737/1-852 YKYAVQLVEM LDMSVPAVAK LRRLLDSLPR EALPDILTSI IRTSNKEKLQ BACU001888/1-1081 YKYAVQLVEM LDISVPAVAK LRRLLDSLPR EALPDILTSI IRTSNKEKLQ ENSTTRP00000014405/1-852 YKYAVQLVEM LDMSVPAVAK LRRLLDSLPR EALPDILTSI IRTSNKEKLQ 201 250 bmy_15446T0/1-737 ILDAVSLEER FKMTIPLLVR QIEGLKLLQK TRKHKQDDDK RIIAIRPIRR ENSBTAP00000014427/1-852 ILDAVSLEER FKMTIPLLVR QIEGLKLLQK TRKHKQDDDK RVIAIRPMRR ENSP00000285737/1-852 ILDAVSLEER FKMTIPLLVR QIEGLKLLQK TRKPKQDDDK RVIAIRPIRR BACU001888/1-1081 ILDAVSLEER FKMTIPLLVR QIEGLKLLQK TRKHKQDDDK RIIAIRPIRR ENSTTRP00000014405/1-852 ILDAVSLEER FKMTIPLLVR QIEGLKLLQK TRKHKQDDDK RVIAIRPIRR 251 300 bmy_15446T0/1-737 ITHIPGTLED EDEDEDNDDI VMLEKKIRTS SMPDQAHKVC VKEIKRLKKM ENSBTAP00000014427/1-852 ITHVPGALAD EDEDEDNDDI VMLEKKIRTS SMPEQAHKVC VKEIKRLKKM ENSP00000285737/1-852 ITHISGTLED EDEDEDNDDI VMLEKKIRTS SMPEQAHKVC VKEIKRLKKM BACU001888/1-1081 ITHIPGTLED EDEDEDNDDI VMLEKKIRTS SMPDQAHKVC VKEIKRLKKM ENSTTRP00000014405/1-852 ITHIPGTLED EDEDEDNDDI VMLEKKIRTS SMPDQAHKVC VKEIKRLKKM 301 350 bmy_15446T0/1-737 PQSMPEYALT RNYLELMVEL PWNKSTTDRL DIRAARILLD NDHYAMEKLK ENSBTAP00000014427/1-852 PQSMPEYALT RNYLELMVEL PWNKSTTDRL DIRAARVLLD NDHYAMEKLK ENSP00000285737/1-852 PQSMPEYALT RNYLELMVEL PWNKSTTDRL DIRAARILLD NDHYAMEKLK BACU001888/1-1081 PQSMPEYALT RNYLELMVEL PWNKSTTDRL DIRAARILLD NDHYAMEKLK ENSTTRP00000014405/1-852 PQSMPEYALT RNYLELMVEL PWNKSTTDRL DIRAARILLD NDHYAMEKLK 351 400 bmy_15446T0/1-737 KRVLEYLAVR QLKNNLKGPI LCFVGPPGVG KTSVGRSVAK TLGREFHRIA ENSBTAP00000014427/1-852 KRVLEYLAVR QLKNNLKGPI LCFVGPPGVG KTSVGRSVAK TLGREFHRIA ENSP00000285737/1-852 KRVLEYLAVR QLKNNLKGPI LCFVGPPGVG KTSVGRSVAK TLGREFHRIA BACU001888/1-1081 KRVLEYLAVR QLKNNLKGPI LCFVGPPGVG KTSVGRSVAK TLGREFHRIA ENSTTRP00000014405/1-852 KRVLEYLAVR QLKNNLKGPI LCFVGPPGVG KTSVGRSVAK TLGREFHRIA 401 450 bmy_15446T0/1-737 LGGVCDQSDI RGHRRTYVGS MPGRIINGLK TVGVNNPVFL LDEVDKLGKS ENSBTAP00000014427/1-852 LGGVCDQSDI RGHRRTYVGS MPGRIINGLK TVGVNNPVFL LDEVDKLGKS ENSP00000285737/1-852 LGGVCDQSDI RGHRRTYVGS MPGRIINGLK TVGVNNPVFL LDEVDKLGKS BACU001888/1-1081 LGGVCDQSDI RGHRRTYVGS MPGRIINGLK TVGVNNPVFL LDEVDKLGKS ENSTTRP00000014405/1-852 LGGVCDQSDI RGHRRTYVGS MPGRIINGLK TVGVNNPVFL LDEVDKLGKS 451 500 bmy_15446T0/1-737 LQGDPAAALL EVLDPEQNHN FTDHYLNVAF DLSQVLFIAT ANTTATIPPA ENSBTAP00000014427/1-852 LQGDPAAALL EVLDPEQNHN FTDHYLNVAF DLSQVLFIAT ANTTASIPPA ENSP00000285737/1-852 LQGDPAAALL EVLDPEQNHN FTDHYLNVAF DLSQVLFIAT ANTTATIPAA BACU001888/1-1081 LQGDPAAALL EVLDPEQNHN FTDHYLNVAF DLSQVLFIAT ANTTATIPPA ENSTTRP00000014405/1-852 LQGDPAAALL EVLDPEQNHN FTDHYLNVAF DLSQVLFIAT ANTTATIPPA 501 550 bmy_15446T0/1-737 LLDRMEIIQV PGYTQEEKIE IAHRHLIPKQ LEQHGLTPQQ IQIPQVTTLD ENSBTAP00000014427/1-852 LLDRMEIIQV PGYTQEEKIE IAHRHLIPKQ LEQHGLTPQQ IQIPQVTTLD ENSP00000285737/1-852 LLDRMEIIQV PGYTQEEKIE IAHRHLIPKQ LEQHGLTPQQ IQIPQVTTLD BACU001888/1-1081 LLDRMEIIQV PGYTQEEKIE IAHRHLIPKQ LEQHGLTPQQ IQIPQVTTLD ENSTTRP00000014405/1-852 LLDRMEIIQV PGYTQEEKIE IAHRHLIPKQ LEQHGLTPQQ IQIPQVTTLD 551 600 bmy_15446T0/1-737 IITRYTREAG VRSLDRKLGA ICRAVAVKVA EGQHREARLD RPDVAEGQGY ENSBTAP00000014427/1-852 IITRYTREAG VRSLDRKLGA ICRAVAVKVA EGQHREAKLD RPDVAEGEGC ENSP00000285737/1-852 IITRYTREAG VRSLDRKLGA ICRAVAVKVA EGQHKEAKLD RSDVTEREGC BACU001888/1-1081 IITRYTREAG VRSLDRKLGA ICRAVAVKVA EGQHREARLD RPDVAEGQGY ENSTTRP00000014405/1-852 IITRYTREAG VRSLDRKLGA ICRAVAVKVA EGQHREARLD RPDVAEGEGY 601 650 bmy_15446T0/1-737 REHILEDTKP ESISDTTDLA LPPEMPILID FHALKDILGP PMYEMEDSTD ENSBTAP00000014427/1-852 KEHLLEDGKS DPVSDTTDLA LPPEMPILID FHALKDILGP PMYEM----- ENSP00000285737/1-852 REHILEDEKP ESISDTTDLA LPPEMPILID FHALKDILGP PMYEM----- BACU001888/1-1081 REHILEDTKP ESTSDTTDLA LPPEMPILID FHALKDILGP PMYEMEDSTD ENSTTRP00000014405/1-852 REHIVEDTKP ESINDTTDLA LPPEMPILID FHALKDILGP PMYEM----- 651 700 bmy_15446T0/1-737 A--------- ---------- ---------- ---------- ---ALSLAHH ENSBTAP00000014427/1-852 ---------- ---------- ---------- ---------- ---EVSERLS ENSP00000285737/1-852 ---------- ---------- ---------- ---------- ---EVSQRLS BACU001888/1-1081 AALSLAHHQP VVPRKGLTGR AGKQLALSSA GVAPDRGCVA QLPEVSERLS ENSTTRP00000014405/1-852 ---------- ---------- ---------- ---------- ---EVSERLS 701 750 bmy_15446T0/1-737 QPVV------ -PRKG----- ---------- --LTG----- -RACKQLALS ENSBTAP00000014427/1-852 QPGVAIGLAW TPLGGEIMFV EASRMDGEGQ LTLTGQLGNV MKESAHLAIS ENSP00000285737/1-852 QPGVAIGLAW TPLGGEIMFV EASRMDGEGQ LTLTGQLGDV MKESAHLAIS BACU001888/1-1081 QPGVAIGLAW TPLGGEIMFV EASRMDGEGQ LTLTGQLGDV MKESAHLAIS ENSTTRP00000014405/1-852 QPGVAIGLAW TPLGGEIMFV EASRMDGEGQ LTLTGQLGDV MKESAHLAIS 751 800 bmy_15446T0/1-737 ---------- ---------- ---------- SAGAAPDRG- --------CV ENSBTAP00000014427/1-852 WLRSNAKKYH LTNASGSFDL LENTDIHLHF PAGAVTKDGP SAGVTIATCL ENSP00000285737/1-852 WLRSNAKKYQ LTNAFGSFDL LDNTDIHLHF PAGAVTKDGP SAGVTIVTCL BACU001888/1-1081 WLRSNAKKYH LTNASGSFDL LENTDIHLHF PAGAVTKDGP SAGVTIATCL ENSTTRP00000014405/1-852 WLRSNAKKYH LTNASGSFDL LENTDIHLHF PAGAVTKDGP SAGVTIATCL 801 850 bmy_15446T0/1-737 AQL------- ------PEVT VADPGTP--- ---------- --------PK ENSBTAP00000014427/1-852 ASLFSGRLVR SDVAMTGEIT LRGLVLPVGG IKDKALAAHR AGLKRVIIPQ ENSP00000285737/1-852 ASLFSGRLVR SDVAMTGEIT LRGLVLPVGG IKDKVLAAHR AGLKQVIIPR BACU001888/1-1081 ASLFSGRLVC SDVAMTGEIT LRGLVLPVGG IKDKVLAAHR AGLKRVIIPQ ENSTTRP00000014405/1-852 ASLFSGRLVC SDVAMTGEIT LRGLVLPVGG IKDKVLAAHR AGLKRVIIPQ 851 900 bmy_15446T0/1-737 QTSSQLEK-- SNIPRDFKEV ---------- ----GRWRAA VVTTLAGA-- ENSBTAP00000014427/1-852 RNEKDLEEIP ANVRQDLSFI TASCLDEVLN AAFDGGFTVK ARPGLLNSKL ENSP00000285737/1-852 RNEKDLEGIP GNVRQDLSFV TASCLDEVLN AAFDGGFTVK TRPGLLNSKL BACU001888/1-1081 RNEKDLEEIP GNVRQDLSFV TATCLDEVLN AAFDGGFTVS TTPGLLNSKL ENSTTRP00000014405/1-852 RNEKDLEEIP GNVRQDLTFV TATCLDEVLN AAFDGGFTVS TRPGLLNSKL 901 950 bmy_15446T0/1-737 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014427/1-852 ---------- ---------- ---------- ---------- ---------- ENSP00000285737/1-852 ---------- ---------- ---------- ---------- ---------- BACU001888/1-1081 VISHPEEAYL QGKSTELATF SIAKLRMDPN GPRQVGQHKH WLQRQRIEAP ENSTTRP00000014405/1-852 ---------- ---------- ---------- ---------- ---------- 951 1000 bmy_15446T0/1-737 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014427/1-852 ---------- ---------- ---------- ---------- ---------- ENSP00000285737/1-852 ---------- ---------- ---------- ---------- ---------- BACU001888/1-1081 ILSQEEPTTP PHELKFACVS KNGSHCRAVL CWALNLRLSV SEVYLPQIHR ENSTTRP00000014405/1-852 ---------- ---------- ---------- ---------- ---------- 1001 1050 bmy_15446T0/1-737 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014427/1-852 ---------- ---------- ---------- ---------- ---------- ENSP00000285737/1-852 ---------- ---------- ---------- ---------- ---------- BACU001888/1-1081 LGSSQLGEGQ DCRVRGGDRT RNCALGASSS YHCRVRPAAG RARSNAERQT ENSTTRP00000014405/1-852 ---------- ---------- ---------- ---------- ---------- 1051 1100 bmy_15446T0/1-737 ---------- ---------- ---------- - ENSBTAP00000014427/1-852 ---------- ---------- ---------- - ENSP00000285737/1-852 ---------- ---------- ---------- - BACU001888/1-1081 AAERQTAAGT LCSGRRLPLW AKGGAAHGGG D ENSTTRP00000014405/1-852 ---------- ---------- ---------- -