KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:59 2014 Check: 00 .. Name: ENSP00000371432/1-622 Len: 1059 Check: 1532 Weight: 1.00 Name: ENSBTAP00000014437/1-581 Len: 1059 Check: 6294 Weight: 1.00 Name: ENSTTRP00000004815/1-622 Len: 1059 Check: 5137 Weight: 1.00 Name: bmy_17613T0/1-625 Len: 1059 Check: 9344 Weight: 1.00 Name: BACU015021/1-1059 Len: 1059 Check: 8169 Weight: 1.00 // 1 50 ENSP00000371432/1-622 MKENVASATV FTLLLFLNTC LLNGQLPPGK PEIFKCRSPN KETFTCWWRP ENSBTAP00000014437/1-581 MKENAASRVV FILLLFLSVS LLNGQSPPEK PKLVKCRSPG KETFTCWWEP ENSTTRP00000004815/1-622 MKENVASTVV FILLLFLNTN LLNGQSPPGK PEIFKCRSPE KETFTCWWKP bmy_17613T0/1-625 MKENAASTVV FILLLFLNTN LLNGQSPPGK PEIFKCRSPE KETFTCWWKP BACU015021/1-1059 MKENAASTVV FILLLFLNTN LLNGQSLPGK PEIFKCRSPE KETFTCWWKP 51 100 ENSP00000371432/1-622 GTDGGLPTNY SLTYHREGET LMHECPDYIT GGPNSCHFGK QYTSMWRTYI ENSBTAP00000014437/1-581 GADGGLPTNY TLTYHKEGET LIHECPDYKT GGPNSCYFSK KHTSIWKMYV ENSTTRP00000004815/1-622 GADGGLPTNY TLTYHKEGET FTHECPDYKT GGPNSCYFNK KHTSIWTIYI bmy_17613T0/1-625 GADGRLPTNY TLTYRKEGET FSHECPDYKT GGPNSCYFNK KHTSIWTIYI BACU015021/1-1059 GADGRLPTNY TLTYRKEGET FTHECPDYKT GGPNSCYFNK KHTSIWTIYI 101 150 ENSP00000371432/1-622 MMVNATNQMG SSFSDELYVD VTYIVQPDPP LELAVEVKQP EDRKPYLWIK ENSBTAP00000014437/1-581 ITVNAINQMG ISSSDPLYVD VTYIVEPEPP ANLTLELKHP EDRKPYLWIK ENSTTRP00000004815/1-622 ITVNATNQMG SSSSDPRYVD VTYIVEPDPP VNLTLELKQP EDRKPYLWIK bmy_17613T0/1-625 ITVNATNQMG SSSSDPRYVD VTYIVEPDPP VNLTLELKQP EDSKPYLWIK BACU015021/1-1059 ITVNATNQMG SSSSDPRYVD VTYIVEPDPP VNLTLELKQP EDSKPYLWIK 151 200 ENSP00000371432/1-622 WSPPTLIDLK TGWFTLLYEI RLKPEKAAEW EIHFAGQQTE FKILSLHPGQ ENSBTAP00000014437/1-581 WSPPTMTDVK SGWFIIQYEI RLKPEKATDW ETHFTPKQTQ LKIFNLYPGQ ENSTTRP00000004815/1-622 WFPPTLVDVR SGWLTLQYEI RLKPEKAAEW ETHFAGQQTQ FKILSLYPGQ bmy_17613T0/1-625 WFPPTLVDVR SGWLTLQYEI RLKPEKAAEW ETHFAGQQTQ FKILSLYPGQ BACU015021/1-1059 WFPPTLVDVR SGWLTLQYEI RLKPEKAAEW ETHFAGQQTQ FKILSLYPGQ 201 250 ENSP00000371432/1-622 KYLVQVRCKP DHGYWSAWSP ATFIQIPSDF TMNDTTVWIS VAVLSAVICL ENSBTAP00000014437/1-581 KYLVQIRCKP DHGYWSEWSP ESSIQIPNDF PVKDTSMWIF VAILSAVICL ENSTTRP00000004815/1-622 KYLVQVHCKP DHGFWSEWSP ESSIPIPNDF SMTDATVWIF VAVLSAVICL bmy_17613T0/1-625 KYLVQVHCKP DHGFWSEWSP ESSIQTPNDF SMKDATVWIF VAVLSAVICL BACU015021/1-1059 KYLVQVHCKP DHGFWSEWSP ESSIQIPNDF SMKDATVWIF VAVLSAVICL 251 300 ENSP00000371432/1-622 IIVWAVALKG YSMVTCIFPP VPGPKIKGFD AHLLEKGKSE ELLSALGCQD ENSBTAP00000014437/1-581 IMVWAVALKG YSMVTCILPP VPGPKIKGFD VHLLEKGKSE ELLRALESQD ENSTTRP00000004815/1-622 IMVWVVALKG YSMVTCILPP VPGPKIKGFD THLLEKGKSE ELLSALGCQD bmy_17613T0/1-625 IMVWAVALKG YSMVTCILPP VPGPKIKGFD THLLEKGKSE ELLSALGCQD BACU015021/1-1059 IMVWAVALKG YSMVTCILPP VPGPKIKGFD THLLEKGKSE ELLSALGCQD 301 350 ENSP00000371432/1-622 FPPTSDYEDL LVEYLEVDDS EDQHLMSVHS KEHPSQGMKP TYLDPDTDSG ENSBTAP00000014437/1-581 FPPTSDCEDL LMEFIEVDDC EDQQLMPRPS KEHTEQGVKP MHLDLDSDSG ENSTTRP00000004815/1-622 FPPTSDCEDL LVE-LEVDDS GDQQLLAAHS KEHSG-CVNP MHSDPDSDSG bmy_17613T0/1-625 FPPTSDCEDL LVEFLEVDDS EGQQLMPAHS KEHPGQGVRP THLDPDSDSG BACU015021/1-1059 FPPTSDCEDL LVEFLEVDDS EGQQLMPAHS KEHPGRGVRP THLDPDSDSG 351 400 ENSP00000371432/1-622 RGSCDSPSLL SEKCEEPQAN PSTFYDPEVI EKPENPET-- THTWDPQCIS ENSBTAP00000014437/1-581 RGSCDSPSLL SEKCDEPQAH PSKFHTPEGP EKLENPETNL TCLQAPQSTS ENSTTRP00000004815/1-622 RGSCYSPSLL SEKCDEPRAN PSKFHS-EGL EKAEKRETNV TQPQGPQSTS bmy_17613T0/1-625 RGSCDSPSLL SEKCDEPRAN PSKFHTPEGL EKAEKPETNI TQPQDPQSTS BACU015021/1-1059 RGSCDSPSLL SEKCDEPRAN PSKFHTPEGL EKAEKPETNV TQPQDPQSTS 401 450 ENSP00000371432/1-622 MEGKIPYFHA GGSKCSTWPL PQ-PSQHNPR SSYHNITDVC ELAVGPAGAP ENSBTAP00000014437/1-581 GEGKIPYFLA NGPKSSTWPF PQPPSLYSPR YSYHNIADVC ELALGMAGTT ENSTTRP00000004815/1-622 VEGKIPSLHA SGSQSSTWPL LQPPGLHYSR SSYHSVADVC KLGLGTAGAA bmy_17613T0/1-625 VEGKIPSFHA SGSQPSTWPL LQPPSLPYPR SSYHSVADVC KLGLGTAGAA BACU015021/1-1059 VEGKIPSFHA SGSQSSTWPL LQSPSLPYPR SSYHSVADVC KLGLGTPGAA 451 500 ENSP00000371432/1-622 ATLLNEAGKD ALKSSQTIKS REEGKATQQR EVESFHSETD QDTPWLLPQE ENSBTAP00000014437/1-581 ATSLDQTDQH ALKASKTIET GREGKATKQR ESEGCSSKPD QDTVWPRPQD ENSTTRP00000004815/1-622 STLLDKTDTC ALKPSQTIET GGEGKAAERG ESESFRFKTD QDAARLLPQD bmy_17613T0/1-625 STLLDKTDTH AFKPSQTIET GGEGKAAEQR ESESFRSKTD QDAARLLPQD BACU015021/1-1059 SALLDETDTH ALKPSQTIET GGEGKAAEQR ESESFRSKTD QDAARLLPQD 501 550 ENSP00000371432/1-622 KTPFGSAKPL DYVEIHKVNK DGALSLLPKQ RENSGKPKKP GTPENNKEYA ENSBTAP00000014437/1-581 KTPLISAKPL EYVEIHKVSQ DGVLALFPKQ NEKFG----- -APEASKEYS ENSTTRP00000004815/1-622 KTPLTSAKPL EYVEIHKVSK DGALALLPKQ NEHSGRAEKT STPETSKEYS bmy_17613T0/1-625 KTPSISAKPL EYVEIHKVSK DGALALLPKP NENSGWAEKT STPETSKEYS BACU015021/1-1059 KTPSISARPL EYVEIHKVSK DGALALLPKP NENSGWAEKT STPETSKEYS 551 600 ENSP00000371432/1-622 KVSGVMDNNI LVLVPDPHAK NVACFEESAK EAPPSLEQNQ AE-------- ENSBTAP00000014437/1-581 KVSRVTDSNI LVLVPDPQAQ NLTLLEEPAK KAPPALP--- ---------- ENSTTRP00000004815/1-622 KVSRVMESNI LVLVQNRRAQ NLAPFEEPAK EAPPSLPQNP AA-------- bmy_17613T0/1-625 KVSRVMDNNI LVLVQDRRAQ DLAPFEEPAK EAPPSLPQNP AE-------- BACU015021/1-1059 KVSRVMDNNI LVLVQDRRAQ DLAPFEEPAK EAPPSLPQNP AESLAYDRVL 601 650 ENSP00000371432/1-622 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014437/1-581 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004815/1-622 ---------- ---------- ---------- ---------- ---------- bmy_17613T0/1-625 ---------- ---------- ---------- ---------- ---------- BACU015021/1-1059 EIHKQHLSPV LTAYFSEPLL LHQGHMEWLF DYEGNRYLDF FSGIVTVSVG 651 700 ENSP00000371432/1-622 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014437/1-581 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004815/1-622 ---------- ---------- ---------- ---------- ---------- bmy_17613T0/1-625 ---------- ---------- ---------- ---------- ---------- BACU015021/1-1059 HCHPKVNAVA QKQLGRLWHT SAVFFHPPIH EYAEKLSALL PEPLKVIFLL 701 750 ENSP00000371432/1-622 ---------- ---------- KALANFTATS SKCR---LQL GGLDYL---- ENSBTAP00000014437/1-581 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004815/1-622 ---------- ---------- VDLASFPAAP SSCR---LQL GGLDYL---- bmy_17613T0/1-625 ---------- ---------- VDLASFPAAP SNCR---LQL GGLDYL---- BACU015021/1-1059 NSGSEANDLA MLMARAHSNN TDIISFRGAY HGCSPYTLGL TNVGFYKMGL 751 800 ENSP00000371432/1-622 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014437/1-581 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004815/1-622 ---------- ---------- ---------- ---------- ---------- bmy_17613T0/1-625 ---------- ---------- ---------- ---------- ---------- BACU015021/1-1059 PSGMGCQSTM CPDVFCGPWG GSHCRDSPVQ TIRKCSCAPG PAGQGGRHMV 801 850 ENSP00000371432/1-622 ---------- ---------- ---------- ---------- --DPACFT-- ENSBTAP00000014437/1-581 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004815/1-622 ---------- ---------- ---------- ---------- --HPTGFM-- bmy_17613T0/1-625 ---------- ---------- ---------- ---------- --HPTGFM-- BACU015021/1-1059 EDCCQAKDQY IEQFKDTLST SVAKSIAGFF AEPIQGVNGV VQYPKGFLKE 851 900 ENSP00000371432/1-622 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014437/1-581 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004815/1-622 ---------- ---------- ---------- ---------- ---------- bmy_17613T0/1-625 ---------- ---------- ---------- ---------- ---------- BACU015021/1-1059 AFELVRERGG VCVADEVQTG FGRLGSHFWG FQTHGVLPDI VTMAKGIGNG 901 950 ENSP00000371432/1-622 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014437/1-581 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004815/1-622 ---------- ---------- ---------- ---------- ---------- bmy_17613T0/1-625 ---------- ---------- ---------- ---------- ---------- BACU015021/1-1059 FPMAAVVTTP EIAKSLAKRL LHFNTFGGNP MACAIGSSVL EVIKEENLQE 951 1000 ENSP00000371432/1-622 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014437/1-581 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004815/1-622 ---------- ---------- ---------- ---------- ---------- bmy_17613T0/1-625 ---------- ---------- ---------- ---------- ---------- BACU015021/1-1059 NSQEVGTYML LKFAKLRDEF EIVGDVRGKG LMIGIEMVKD KTSRQPLPRE 1001 1050 ENSP00000371432/1-622 ---------- ---------- ---HSFH--- ---------- ---------- ENSBTAP00000014437/1-581 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004815/1-622 ---------- ---------- ---HPFQ--- ---------- ---------- bmy_17613T0/1-625 ---------- ---------- ---HSFQ--- ---------- ---------- BACU015021/1-1059 EVNQIHQDCK RMGLLIGRGG TFSQTFRIAP SMCITKPEVD FAVEVFRSAL 1051 1100 ENSP00000371432/1-622 --------- ENSBTAP00000014437/1-581 --------- ENSTTRP00000004815/1-622 --------- bmy_17613T0/1-625 --------- BACU015021/1-1059 IQHMERQAK