KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:00 2014 Check: 00 .. Name: ENSP00000372170/1-303 Len: 303 Check: 6479 Weight: 1.00 Name: ENSBTAP00000014447/1-303 Len: 303 Check: 8717 Weight: 1.00 Name: bmy_11164T0/1-297 Len: 303 Check: 3243 Weight: 1.00 Name: ENSTTRP00000011517/1-303 Len: 303 Check: 9961 Weight: 1.00 Name: BACU014362/1-178 Len: 303 Check: 1042 Weight: 1.00 // 1 50 ENSP00000372170/1-303 MAPAADMTSL PLGVKVEDSA FGKPAGGGAG QAPSAAAATA AAMGADEEGA ENSBTAP00000014447/1-303 MAPAADMTSL PLGVKVEDSA FGKPAGGGGG QTPSTTAATV AAMGADEEGA bmy_11164T0/1-297 ------MTSL PLGVKVEDSA FGKPAGGGGG QTPSTTAATA AAMGADEEGA ENSTTRP00000011517/1-303 MAPAADMTSL PLGVKVEDSA FGKPAGGGGG QTPSTTTATA AAMGADEEGA BACU014362/1-178 ---------- ---------- ---------- ---------- ----MDRSGT 51 100 ENSP00000372170/1-303 KPKVSPSLLP FSVEALMADH RKPGAKESAL APSEGVQAAG GSAQPLGVPP ENSBTAP00000014447/1-303 KPKVSPSLLP FSVEALMADH RKPGAKDSVL AASEGAQAAG GSAQPLGARP bmy_11164T0/1-297 KPKVSPSLLP FSVEALMADH RKPGAKDSVL AASEGAQAAG GSAQPLGSRP ENSTTRP00000011517/1-303 KPKVSPSLLP FSVEALMADH RKPGAKDSVL AASESAQAPG GSAQPLGSRP BACU014362/1-178 APSRS----- ---------- ---------- ---------- ------DWPP 101 150 ENSP00000372170/1-303 GSLGAPDAPS SPRPLGHFSV GGLLKLPEDA LVKAESPEKP ERTPWMQSPR ENSBTAP00000014447/1-303 GSLGAPDAPS SPRPLGHFSV GGLLKLPEDA LVKAESPEKP ERTPWMQNPR bmy_11164T0/1-297 GSLGAPDAPS SPRPLGHFSV GGLLKLPEDA LVKAESPEKP ERTPWLQNPR ENSTTRP00000011517/1-303 GSLGAPDAPS SPRPLGHFSV GGLLKLSEDA LVKAESPEKP ERTPWLQNPR BACU014362/1-178 --------PH WPRLINKFS- GEL------- --------RP D--------- 151 200 ENSP00000372170/1-303 FSPPPARRLS PPACTLRKHK TNRKPRTPFT TAQLLALERK FRQKQYLSIA ENSBTAP00000014447/1-303 FSPPPSRRLS PPACTLRKHK TNRKPRTPFT TAQLLALERK FRQKQYLSIA bmy_11164T0/1-297 FSPPPARRLS PPACTLRKHK TNRKPRTPFT TAQLLALERK FRQKQYLSIA ENSTTRP00000011517/1-303 FSPPPARRLS PPACTLRKHK TNRKPRTPFT TAQLLALERK FRQKQYLSIA BACU014362/1-178 --PEPAGRLS PPACTLRKHK TNRKPRTPFT TAQLLALERK FRQKQYLSIA 201 250 ENSP00000372170/1-303 ERAEFSSSLS LTETQVKIWF QNRRAKAKRL QEAELEKLKM AAKPMLPPAA ENSBTAP00000014447/1-303 ERAEFSSSLS LTETQVKIWF QNRRAKAKRL QEAELEKLKM AAKPMLPPAA bmy_11164T0/1-297 ERAEFSSSLS LTETQVKIWF QNRRAKAKRL QEAELEKLKM AAKPMLPPAA ENSTTRP00000011517/1-303 ERAEFSSSLS LTETQVKIWF QNRRAKAKRL QEAELEKLKM AAKPMLPPAA BACU014362/1-178 ERAEFSSSLS LTETQVKIWF QNRRAKAKRL QEAELEKLKM AAKPMLPPAA 251 300 ENSP00000372170/1-303 FGLSFPLGGP AAVAAAAGAS LYGASGPFQR AALPVAPVGL YTAHVGYSMY ENSBTAP00000014447/1-303 FGLSFPLGGP AAVAAAAGAS LYGASGPFQR AALPVAPVGL YTAHVGYSMY bmy_11164T0/1-297 FGLSFPLGGP AAVAAAAGAS LYGASSPFQR AALPVAPVGL YTAHVGYSMY ENSTTRP00000011517/1-303 FGLSFPLGGP AAVAAAAGAS LYGASSPFQR AALPVAPVGL YTAHVGYSMY BACU014362/1-178 FGLSFPLG-- ---AAAAGAS LYGASSPFQR AALPVAPVGL YTAHVGYSMY 301 350 ENSP00000372170/1-303 HLT ENSBTAP00000014447/1-303 HLT bmy_11164T0/1-297 HLT ENSTTRP00000011517/1-303 HLT BACU014362/1-178 HLT