KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:00 2014 Check: 00 .. Name: ENSP00000360485/1-197 Len: 323 Check: 6363 Weight: 1.00 Name: ENSBTAP00000014453/1-194 Len: 323 Check: 7992 Weight: 1.00 Name: ENSTTRP00000010850/1-194 Len: 323 Check: 658 Weight: 1.00 Name: bmy_10760T0/1-305 Len: 323 Check: 7287 Weight: 1.00 Name: BACU019826/1-193 Len: 323 Check: 7464 Weight: 1.00 // 1 50 ENSP00000360485/1-197 MSETQNSTSQ KAMDEDNKAA SQTMPNTQDK NYEDELTQVA LALVEDVINY ENSBTAP00000014453/1-194 MNVTKNVKFE KEANEDKGST SQAMATEDPQ D----ITKIA LTLAKDAITA ENSTTRP00000010850/1-194 MNVTKNAKFQ KEVDVDKSPT SQMMDTEDTQ N----VTELA LAVAKNVIAA bmy_10760T0/1-305 MWI------- ------KVPT SQMMDTEDTQ N----VTELA LALAKNAIAA BACU019826/1-193 MNVTKNVKFQ KEVDVDK-PT SQMMDTEDTQ N----VTELA LALAKNAIAA 51 100 ENSP00000360485/1-197 AVKIVEEERN PLKNIKWMTH GEFTVEKGLK QIDEYFSKCV SKKCWA-HGV ENSBTAP00000014453/1-194 AVKSAEEAEN PVKNIDWITH GEFTEEKGRQ QVEEFVLRLF LKKSWWEHYT ENSTTRP00000010850/1-194 AIKFVEEAKK PIKNIDWITQ GEFTEERGRK QIEDFVSHWK YHGRWV-HYT bmy_10760T0/1-305 AIKSMEEAEN PIKNIDWITQ GEFTEERGRE QIEEFISNWE YQGHWS-HYT BACU019826/1-193 AIKSMEEAEN PIKNIDWITQ GEFTEERGRK QIEEFISNWE YQGCWS-HYT 101 150 ENSP00000360485/1-197 EFVERKDLIH SFLYIYYVHW SISTADLPVA RISAGTYFTM KVSKTKPPDA ENSBTAP00000014453/1-194 EFLRKEDVLH SFYYIYCVRW SIPTARRPIA QITASVYFTI KVNKNKPLDT ENSTTRP00000010850/1-194 EFLKREDVIH SFHYIYCVHW SIPTARRPIP RISASVYFTI KINTNKPPDT bmy_10760T0/1-305 EFLKREDVIH SFHYIYCVHW SIPTARRPIA RTTASVYFTI KINTNKPPDT BACU019826/1-193 EFLKREDVIH SFHYIYCVHW SIPTARRPIA RTTASVYFTI KINTNKPPDT 151 200 ENSP00000360485/1-197 PIVVSYVGDH QALVHRPGMV RFRENWQKNL TDAKYSFMES FPFLFN---- ENSBTAP00000014453/1-194 PIDVSYVFEG HSLVHRPGEI RFREKWLRDI IEAKYVLMNP NIFQFN---- ENSTTRP00000010850/1-194 PIDVSYVFES HSVVHRPGTT HFQEKCLRDI IEGKYILMNS NIFQLN---- bmy_10760T0/1-305 PIDVSYVFES HSFVHRPGMT HFQEKRLRDI IEAKYILMNS NIFQFNSSTL BACU019826/1-193 PIDVSYVFES HSFVHRPGMT HFQEKYLRDI IEAKYILMNS NIFQFN---- 201 250 ENSP00000360485/1-197 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014453/1-194 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010850/1-194 ---------- ---------- ---------- ---------- ---------- bmy_10760T0/1-305 HLFNPINYNI LTHPLRDTPA TSPRSLKVRG DAQSCPPLPE AQASHGALRF BACU019826/1-193 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000360485/1-197 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014453/1-194 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010850/1-194 ---------- ---------- ---------- ---------- ---------- bmy_10760T0/1-305 GDSPTSHLLF MLPQELLKPR SQFAVDLQTT ASRGLVFYTG TKNSFMALYL BACU019826/1-193 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000360485/1-197 ---------- ---------- RV- ENSBTAP00000014453/1-194 ---------- ---------- SI- ENSTTRP00000010850/1-194 ---------- ---------- RVR bmy_10760T0/1-305 SKGRLVFALG AGGKKLKLKS KVQ BACU019826/1-193 ---------- ---------- SVR