KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:53:02 2014 Check: 00 .. Name: ENSTTRP00000014787/1-212 Len: 284 Check: 5602 Weight: 1.00 Name: ENSP00000330269/1-228 Len: 284 Check: 6248 Weight: 1.00 Name: bmy_13384T0/1-215 Len: 284 Check: 3551 Weight: 1.00 Name: ENSBTAP00000014474/1-174 Len: 284 Check: 4135 Weight: 1.00 // 1 50 ENSTTRP00000014787/1-212 MAVDVESSLA SGWEGTAPLS PSAAVSTSSA IW-GSQRTKP GRMRRPLWPG ENSP00000330269/1-228 MAVDVEFGVA GWWEAAAPLS PSAVAATFTE TWPGSERAEP GRIQHPLWPG bmy_13384T0/1-215 ---------- ---------- ---------- ---------- --MQRPLWPG ENSBTAP00000014474/1-174 ---------- ---------- ---------- ---------- --MQRQLWLG 51 100 ENSTTRP00000014787/1-212 GFRGLWRLLC FLLLKSRPGS GRDVSDH--- ---------- ---------- ENSP00000330269/1-228 SSEGLQLLVC FLLLNSCPGG CSDTSAH--- ---------- ---------- bmy_13384T0/1-215 GFRGLWLLLC FLLLKSRPGS GSDVSDHGCL WSLVLTWKLV PKVNEVQGLK ENSBTAP00000014474/1-174 GFRGLWLLVC FLLLNSRLGG SSDVSGH--- ---------- ---------- 101 150 ENSTTRP00000014787/1-212 ---------- --------DG QGQVGVGHLW TLQGFTTPVF QQLQVVLQQI ENSP00000330269/1-228 ---------- --------DG QDQVGVGQLW PLQGFATPVF QHLQVVLQQI bmy_13384T0/1-215 NRAGGDGGRK NEKEDLKGDG QGQVGVGHLW TLQGFTTPVF QQLQVVLQQI ENSBTAP00000014474/1-174 ---------- --------DG QSQVGVGQLW PLPGFTTPVF KHLQVLLQQI 151 200 ENSTTRP00000014787/1-212 MPQXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXX----- ENSP00000330269/1-228 IPQGLFWKDD ITQDAMIQKM EHASRLHPQE PCLKDGKALF PTKTT----- bmy_13384T0/1-215 MPQGLFWKDD MTQDVMTQKM GHIGKLHSQD PCVRIGQAAF PTKTTRVRGK ENSBTAP00000014474/1-174 MPHDLFWKDD MTQEVMTQKM GRTSKLHPED PCVRSGPAAF PTRTPGVRGK 201 250 ENSTTRP00000014787/1-212 ---------- XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000330269/1-228 ---------- ESPLAKVNRD QCFTSEVVSK ALKQEVANPV KITYRCSYGG bmy_13384T0/1-215 QGEKLRLLFP KTPMVKVNRD QCFTSKVVSK ALKREVTNPV K--------- ENSBTAP00000014474/1-174 QEEKLRLLFP KSPMVKVNKD QCFTSKVVSK VLKHEVANPV K--------- 251 300 ENSTTRP00000014787/1-212 XGVMQVLGVS KGEMIYRII- ---------- ---- ENSP00000330269/1-228 LDMMQAPGPS KEEIIYKIMR LLWATSYCGP QPCG bmy_13384T0/1-215 -GFFESPPTV GHNLVAD--- ---------- ---- ENSBTAP00000014474/1-174 -GFFESPPTV GHNLVAD--- ---------- ----