KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:02 2014 Check: 00 .. Name: ENSTTRP00000003422/1-217 Len: 288 Check: 7429 Weight: 1.00 Name: ENSP00000262768/1-220 Len: 288 Check: 6096 Weight: 1.00 Name: ENSBTAP00000014476/1-220 Len: 288 Check: 4695 Weight: 1.00 Name: bmy_17065T0/1-190 Len: 288 Check: 8018 Weight: 1.00 Name: BACU011574/1-268 Len: 288 Check: 9666 Weight: 1.00 // 1 50 ENSTTRP00000003422/1-217 --MAARSLRL VL-LLLLGML LRPTDACSCS PVHPQQA--- -----FCNAD ENSP00000262768/1-220 MGAAARTLRL ALGLLLLATL LRPADACSCS PVHPQQA--- -----FCNAD ENSBTAP00000014476/1-220 MGAAARSLPL AFCLLLLGTL LPRADACSCS PVHPQQA--- -----FCNAD bmy_17065T0/1-190 ---MESDAVP RAGIILPLTS HLPAAPC--- PLLRARTVFQ GLCSPLCLCF BACU011574/1-268 ---MPSSVAP -LGKVLQDTF VRVAYGI--- PLERSWA--- ---------- 51 100 ENSTTRP00000003422/1-217 VVIRAKAVSE KEVDSGNDIY GNPIKRIQYE IKQIKMFKGP DKDIEFIYTA ENSP00000262768/1-220 VVIRAKAVSE KEVDSGNDIY GNPIKRIQYE IKQIKMFKGP EKDIEFIYTA ENSBTAP00000014476/1-220 IVIRAKAVNK KEVDSGNDIY GNPIKRIQYE IKQIKMFKGP DQDIEFIYTA bmy_17065T0/1-190 AVIRAKAVSE KEVDSGNDIY GNPIKRIQYE IKQIKMFKGP DKDIEFIYTA BACU011574/1-268 RVIRAKAVSE KEVDSGNDIY GNPIKRIQYE IKQIKMFKGP DKDIEFIYTA 101 150 ENSTTRP00000003422/1-217 PSSAVCGXXX XXXXXXXXXX XXKAEGNGKM HITLCDFIVP WDTLSTTQKK ENSP00000262768/1-220 PSSAVCGVSL DVGGKKEYLI AGKAEGDGKM HITLCDFIVP WDTLSTTQKK ENSBTAP00000014476/1-220 PSSAVCGVSL DIGGKKEYLI AGKAEGNGNM HITLCDFIVP WDTLSATQKK bmy_17065T0/1-190 PSSAVCGVSL DIGGKKEYLI AGKAEGNGKM HITLCDFIVP WDTLSTTQKK BACU011574/1-268 PSSAVCGVSL DIGGKKEYLI AGKAEGNGKM HITLCDFIVP WDTLSTTQKK 151 200 ENSTTRP00000003422/1-217 SLNHRYQMGC ECK------- ---------- ---------- ---------- ENSP00000262768/1-220 SLNHRYQMGC ECK------- ---------- ---------- ---------- ENSBTAP00000014476/1-220 SLNHRYQMGC ECK------- ---------- ---------- ---------- bmy_17065T0/1-190 SLNHRYQMGC ECK------- ---------- ---------- ---------- BACU011574/1-268 SLNHRYQMGC ECKPQHRMRV WVQKMLAQRG PVQGCRDWPM PVGAACAALL 201 250 ENSTTRP00000003422/1-217 ---------- ---------- ---ITRCPMI PCYISSPDEC LWMDWVTEKS ENSP00000262768/1-220 ---------- ---------- ---ITRCPMI PCYISSPDEC LWMDWVTEKN ENSBTAP00000014476/1-220 ---------- ---------- ---ITRCPMI PCYISSPDEC LWMDWVTEKN bmy_17065T0/1-190 ---------- ---------- ---------- ---------- ---------- BACU011574/1-268 PILVGGPSCP SLIQNVNSDL QLHITRCPMI PCYISSPDEC LWMDWVTEKN 251 300 ENSTTRP00000003422/1-217 INGHQAKFFA CIKRSDGSCA WYRGAAPPKQ EFLDIEDP ENSP00000262768/1-220 INGHQAKFFA CIKRSDGSCA WYRGAAPPKQ EFLDIEDP ENSBTAP00000014476/1-220 INGHQAKFFA CIKRSDGSCA WYRGAAPPKQ EFLDIEDP bmy_17065T0/1-190 -----AKFFA CIKRSDGSCA WYRGAAPPKQ EFLDIEDP BACU011574/1-268 INGHQAKFFA CIKRSDGSCA WYRGAAPPKQ EFLDIEDP