KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:03 2014 Check: 00 .. Name: ENSTTRP00000012896/1-802 Len: 846 Check: 7668 Weight: 1.00 Name: ENSBTAP00000014487/1-790 Len: 846 Check: 2752 Weight: 1.00 Name: ENSP00000261991/1-802 Len: 846 Check: 4899 Weight: 1.00 Name: bmy_18536T0/1-561 Len: 846 Check: 1282 Weight: 1.00 Name: BACU008779/1-800 Len: 846 Check: 4094 Weight: 1.00 // 1 50 ENSTTRP00000012896/1-802 MEEEGGSGGG GATDTSRDGG AGGEQLLTVK HELRTANLTG HAEKVGIENF ENSBTAP00000014487/1-790 MEEKGGSG-- --------GD AGGEQLRVVK HELRTANLTG HAEKVGIENF ENSP00000261991/1-802 MEEEGGSS-G GAAGTSADGG DGGEQLLTVK HELRTANLTG HAEKVGIENF bmy_18536T0/1-561 ---------- ---------- ---------- ---------- ---------- BACU008779/1-800 MEEEGGSGGG GATGTSRDGG AGGEQLLTVK HELRTANLTG HAEKVGIENF 51 100 ENSTTRP00000012896/1-802 ELLKVLGTGA YGKVFLVRKI SGHDAGKLYA MKVLKKATIV QKAKTTEHTR ENSBTAP00000014487/1-790 ELLKVLGTGA YGKVFLVRKV SGHDAGKLYA MKVLKKATIV QKAKSAEHTR ENSP00000261991/1-802 ELLKVLGTGA YGKVFLVRKI SGHDTGKLYA MKVLKKATIV QKAKTTEHTR bmy_18536T0/1-561 ---------- ---------- ---------- ---------- ---------- BACU008779/1-800 ELLKVLGTGA YGKVFLVRKI SGHDAGKLYA MKVLKKATIV QKAKTTEHTR 101 150 ENSTTRP00000012896/1-802 TERQVLEHIR QSPFLVTLHY AFQTETKLHL ILDYINGGEL FTHLSQRERF ENSBTAP00000014487/1-790 TERQVLEHIR QSPFLVTLHY AFQTETKLHL ILDYINGGEL FTHLSQRERF ENSP00000261991/1-802 TERQVLEHIR QSPFLVTLHY AFQTETKLHL ILDYINGGEL FTHLSQRERF bmy_18536T0/1-561 ---------- ---------- ---------- ---------- ---------- BACU008779/1-800 TERQVLEHIR QSPFLVTLHY AFQTETKLHL ILDYINGGEL FTHLSQRERF 151 200 ENSTTRP00000012896/1-802 TEHEVQIYVG EIVLALEHLH KLGIIYRDIK LENILLDSNG HVVLTDFGLS ENSBTAP00000014487/1-790 TEREVQIYVG EIVLALGHLH KLGIIYRDIK LENILLDSNG HVMLTDFGLS ENSP00000261991/1-802 TEHEVQIYVG EIVLALEHLH KLGIIYRDIK LENILLDSNG HVVLTDFGLS bmy_18536T0/1-561 ---------- ---------- ---------- ---------- ---------- BACU008779/1-800 TEHEVQIYVG EIVLALEHLH KLGIIYRDIK LENILLDSNG HVVLTDFGLS 201 250 ENSTTRP00000012896/1-802 KEFVADEAER AYSFCGTIEY MAPDIVRGGD SGHDKAVDWW SLGVLMYELL ENSBTAP00000014487/1-790 KEFVADEAER AYSFCGTIEY MAPDIVRGGD SGHDKAVDWW SLGVLMYELL ENSP00000261991/1-802 KEFVADETER AYSFCGTIEY MAPDIVRGGD SGHDKAVDWW SLGVLMYELL bmy_18536T0/1-561 ---------- ---------- ---------- ---------- ---------- BACU008779/1-800 KEFVADEAER AYSFCGTIEY MAPDIVRGGD SGHDKAVDWW SLGVLMYELL 251 300 ENSTTRP00000012896/1-802 TGASPFTVDG EKNSQAEISR RILKSEPPYP QEMSAVAKDL IQRLLMKDPK ENSBTAP00000014487/1-790 TGASPFTVDG EKNSQAEISR RILKSEPPYP QEMSAVAKDL IQRLLMKDPK ENSP00000261991/1-802 TGASPFTVDG EKNSQAEISR RILKSEPPYP QEMSALAKDL IQRLLMKDPK bmy_18536T0/1-561 ---------- ---------- ---------- --MSAVAKDL IQRLLMKDPK BACU008779/1-800 TGASPFTVDG EKNSQAEISR RILKSEPPYP QEMSAVAKDL IQRLLMKDPK 301 350 ENSTTRP00000012896/1-802 KRLGCGPRDA DEIKEHLFFQ KINWDDLAAK KVPAPFKPVI RDELDVSNFA ENSBTAP00000014487/1-790 KRLGCGPRDA DEIKEHPFFQ KINWDDLAAK KVPAPFKPVI RDELDVSNFA ENSP00000261991/1-802 KRLGCGPRDA DEIKEHLFFQ KINWDDLAAK KVPAPFKPVI RDELDVSNFA bmy_18536T0/1-561 KRLGCGPRDA DEIKEHLFFQ KINWDDLAAK KVPAPFKPVI RDELDVSNFA BACU008779/1-800 KRLGCGPRDA DEIKEHLFFQ KINWDDLAAK KVPAPFKPVI RDELDVSNFA 351 400 ENSTTRP00000012896/1-802 EEFTEMDPTY SPAALPQSSE RLFQGYSFVA PSILFKRNAA VIDPLQFHMG ENSBTAP00000014487/1-790 EEFTEMDPTY SPAALPQSSE RLFQGYSFVA PSILFKRNAA VMDPLQLHMG ENSP00000261991/1-802 EEFTEMDPTY SPAALPQSSE KLFQGYSFVA PSILFKRNAA VIDPLQFHMG bmy_18536T0/1-561 EEFTEMDPTY SPAALPQSSE RLFQGYSFVA PSILFKRNAA VIDPLQFHMG BACU008779/1-800 EEFTEMDPTY SPAALPQSSE RLFQGYSFVA PSILFKRNAA VIDPLQFHMG 401 450 ENSTTRP00000012896/1-802 VDRPGXXXXX XXXXXXDSPF YQHYDLDLKD KPLGEGSFSI CRKCINKKSN ENSBTAP00000014487/1-790 VDRPGVTHVA RSAMLKDSPF YQHYDLDLKD TPLGEGSFSI CRKCIHKKSN ENSP00000261991/1-802 VERPGVTNVA RSAMMKDSPF YQHYDLDLKD KPLGEGSFSI CRKCVHKKSN bmy_18536T0/1-561 VDRPGVTNVA RSAMMKDSPF YQYYDLDLKD KPLGEGSFSI CRKCIHKKSN BACU008779/1-800 VDRPGVTNVA RSAMMKDSPF YQHYDLDLKD KPLGEGSFSI CRKCIHKKSN 451 500 ENSTTRP00000012896/1-802 QAFAVKIISK RLEANTQKEI TALKLCEGHP NIVKLHEVFH DQLHTFLVME ENSBTAP00000014487/1-790 QAFAVKIISK RMEASTQKEV TALRLCEGHP NIVKLHEVFH DQLHTFLVME ENSP00000261991/1-802 QAFAVKIISK RMEANTQKEI TALKLCEGHP NIVKLHEVFH DQLHTFLVME bmy_18536T0/1-561 QAFAVKIISK RLEANTQKEI TALKLCEGHP NIVKLHEVFH DQLHTFLVME BACU008779/1-800 QAFAVKIISK RLEANTQKEI TALKLCEGHP NIVKLHEVFH DQLHTFLVME 501 550 ENSTTRP00000012896/1-802 LLNGGELFER IKRKKHFSET EASYIMRKLV SAVSHMHDVG VVHRDLKPEN ENSBTAP00000014487/1-790 LLNGGELFER IKRKKHFSET EASYIMRKLV SAVSHMHDVG VVHRDLKPEN ENSP00000261991/1-802 LLNGGELFER IKKKKHFSET EASYIMRKLV SAVSHMHDVG VVHRDLKPEN bmy_18536T0/1-561 LLNGGELFER IKRKKHFSET EASYIMRKLV SAVSHMHDVG VVHRDLKPEN BACU008779/1-800 LLNGGELFER IKRKKHFSET EASYIMRKLV SAVSHMHDVG VVHRDLKPEN 551 600 ENSTTRP00000012896/1-802 LLFTDENDNL EIKVIDFGFA RLKPPDNQPL KTPCFTLHYA APELLNHNGY ENSBTAP00000014487/1-790 LLFTDENDNL EIKVIDFGFA RLKPPDNQPL KTPCFTLHYA APELLNHSGY ENSP00000261991/1-802 LLFTDENDNL EIKIIDFGFA RLKPPDNQPL KTPCFTLHYA APELLNQNGY bmy_18536T0/1-561 LLFTDENDNL EIKVIDFGFA RLKPPDNQPL KTPCFTLHYA APELLNHNGY BACU008779/1-800 LLFTDENDNL EIKVIDFGFA RLKPPDNQPL KTPCFTLHYA APELLNHNGY 601 650 ENSTTRP00000012896/1-802 DESCDLWSLG VILYTMLSGQ VPFQSHDKSL TCTSAVEIMK KIKKGDFSFE ENSBTAP00000014487/1-790 DESCDLWSLG VILYTMLSGQ VPFQSHDKSL TCTSAVEIMK KIKKGDFSFE ENSP00000261991/1-802 DESCDLWSLG VILYTMLSGQ VPFQSHDRSL TCTSAVEIMK KIKKGDFSFE bmy_18536T0/1-561 DESCDLWSLG VILYTMLSGQ VPFQSHDKSL TCTSAVEIMK KIKKGDFSFE BACU008779/1-800 DESCDLWSLG VILYTMLSGQ VPFQSHDKSL TCTSAVEIMK KIKKGDFSFE 651 700 ENSTTRP00000012896/1-802 GEAWKNVSQE AKDLIQXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000014487/1-790 GEAWKNVSQE AKDLIQGLLT VDPNKRLKMP DLRYNEWLQD GSQLSSNPLM ENSP00000261991/1-802 GEAWKNVSQE AKDLIQGLLT VDPNKRLKMS GLRYNEWLQD GSQLSSNPLM bmy_18536T0/1-561 GEAWKNVSQE AKDLIQGLLT VDPNKRLKMS GLRYNEWLQD GSQLSSNPLM BACU008779/1-800 GEAWKNVSQE AKDLIQGLLT VDPNKRLKMS GLRYNEWLQD GSQLSSNPLM 701 750 ENSTTRP00000012896/1-802 XXXXXXXXGA AVHNCVKATF H--------- ---------- ---------- ENSBTAP00000014487/1-790 TPDILGSSGA AVHTCVKATF H--------- ---------- ---------- ENSP00000261991/1-802 TPDILGSSGA AVHTCVKATF H--------- ---------- ---------- bmy_18536T0/1-561 TPDILGSSGA AVHTCVKATF HSPQKPFPMS FCTLPGVLDT VVLRTMFPEQ BACU008779/1-800 TPDILGSSGA AVHTCVKATF H--------- ---------- ---------- 751 800 ENSTTRP00000012896/1-802 ---------- ----AFNKYK REGFCLQNVD KAPLAKRRKM KKTSTSTETR ENSBTAP00000014487/1-790 ---------- ----AFNKYK REGFCLQNVD KAPLAKRRRM KKTSTSTETR ENSP00000261991/1-802 ---------- ----AFNKYK REGFCLQNVD KAPLAKRRKM KKTSTSTETR bmy_18536T0/1-561 LEAVVAKLAK RKFSAFNKYK REGFCLQNVD KAPLAKRRKM KKTSTSTETR BACU008779/1-800 ---------- ----AFNKYK REGFCLQNVD KAPLAKRRKM KKTSTSTETR 801 850 ENSTTRP00000012896/1-802 SSSSESSHSS SSHSHGKRTP TKTLQPSNPA DSNNPETLFQ FSDAA- ENSBTAP00000014487/1-790 SSSSESSHSS SSHSHGKSTP TRALQPGNPA DGGAPESLFQ FQD--- ENSP00000261991/1-802 SSSSESSHSS SSHSHGKTTP TKTLQPSNPA DSNNPETLFQ FSDSVA bmy_18536T0/1-561 SSSSESSHSS SSHSHGKRTP TKTLQPSNPA DSNNPETLFQ FSD--- BACU008779/1-800 SSSSESSHSS SSHSHGKRTP TKTLQPSNPA DSNNPETLFQ FAD---