KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:53:06 2014  Check: 00 ..

 Name: ENSTTRP00000013289/1-201  Len:    205  Check:  3507  Weight:  1.00
 Name: BACU018332/1-190          Len:    205  Check:  1977  Weight:  1.00
 Name: ENSP00000420127/1-201     Len:    205  Check:  2544  Weight:  1.00
 Name: ENSBTAP00000014511/1-203  Len:    205  Check:  6664  Weight:  1.00
 Name: bmy_00903T0/1-144         Len:    205  Check:  8257  Weight:  1.00

//


                          1                                                   50
ENSTTRP00000013289/1-201  MAGKSSLFKV ILLGDGGVGK SSLMNRYVTN KFDAQLFHTI GVEFLNKDLE 
BACU018332/1-190          ---KSSLLKA ILLGDGGVGK SSLMNRYVTN KFDAQLFHTI GVEFLNKDLE 
ENSP00000420127/1-201     MAGKSSLFKV ILLGDGGVGK SSLMNRYVTN KFDTQLFHTI GVEFLNKDLE 
ENSBTAP00000014511/1-203  MAGKSSLFKV ILLGDGGVGK SSLMNRYVTN KFDAQLFHTI GVEFLNKDLE 
bmy_00903T0/1-144         ---------- ---------- ---------- ---------- ---------- 


                          51                                                 100
ENSTTRP00000013289/1-201  VDGHFVTMQI WDTAGQER-- FRSLRTPFYR GSDCCLLTFS VDDSQSFQNL 
BACU018332/1-190          VDGHFVTMQI WDTAGQERRA VLSLRTPFYR GSDCCLLTFS VDDSQSFQNL 
ENSP00000420127/1-201     VDGHFVTMQI WDTAGQER-- FRSLRTPFYR GSDCCLLTFS VDDSQSFQNL 
ENSBTAP00000014511/1-203  VDGHFVTMQI WDTAGQER-- FRSLRTPFYR GSDCCLLTFS VDDSQSFQNL 
bmy_00903T0/1-144         -------MQI WDTAGQER-- FRSLRTPFYR GSDCCLLTFS VDDSQSFQNL 


                          101                                                150
ENSTTRP00000013289/1-201  RNWKKKFIYY AFVTKPESFP FVILGNKVDI SERQVSAEEA QAWCRDNSDH 
BACU018332/1-190          SNWKKEFIYY ADVKEPESFP FVILGNKVDI SERQGSAEEA QAWCRDNGDY 
ENSP00000420127/1-201     SNWKKEFIYY ADVKEPESFP FVILGNKIDI SERQVSTEEA QAWCRDNGDY 
ENSBTAP00000014511/1-203  SNWKKEFIYY ADVKEPESFP FVILGNKVDI SERQVSAEEA QAWCRDNGDY 
bmy_00903T0/1-144         SNWKKEFIYY ADVKEPESFP FVILGNKVDI SERQVSAEEA QAWCRDNGDY 


                          151                                                200
ENSTTRP00000013289/1-201  PYFETSTKDA TNVAAAFEEA VRRVLATEDR SDHLIQTDTV SLHRKPKPSS 
BACU018332/1-190          PYFETSAKDA TNVAAAFEEA VRRVLATEDR SDHLIQTDTV SLH------- 
ENSP00000420127/1-201     PYFETSAKDA TNVAAAFEEA VRRVLATEDR SDHLIQTDTV NLHRKPKPSS 
ENSBTAP00000014511/1-203  PYFETSAKDA TNVAAAFEEA VRRVLATEDR SDPLIQTDTV RLHRKPKPSS 
bmy_00903T0/1-144         PYFETSAKDA TNVAAAFEEA VRRVLATEDR SDHLIQTDTV SLHRKPKPSS 


                          201                                                250
ENSTTRP00000013289/1-201  SCC-- 
BACU018332/1-190          ----- 
ENSP00000420127/1-201     SCC-- 
ENSBTAP00000014511/1-203  SCCGS 
bmy_00903T0/1-144         SCC--