KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:07 2014 Check: 00 .. Name: bmy_04431T0/1-322 Len: 448 Check: 8547 Weight: 1.00 Name: ENSP00000277942/1-430 Len: 448 Check: 9691 Weight: 1.00 Name: ENSBTAP00000014519/1-443 Len: 448 Check: 447 Weight: 1.00 Name: BACU019205/1-416 Len: 448 Check: 6528 Weight: 1.00 Name: ENSTTRP00000006306/1-428 Len: 448 Check: 4079 Weight: 1.00 // 1 50 bmy_04431T0/1-322 -------MAL IPGATGTPGT RPDPR----- ---------- ---------- ENSP00000277942/1-430 ---------- MEGEPSQPPN SSWPLSQNGT NTEATPATNL TFSSYYQHTS ENSBTAP00000014519/1-443 MVRVWSTEGS PSGEPAQPSN SSWPPSENGS DAQATPAANL TFSSYYQHSS BACU019205/1-416 ---------- LLGEPSQPSN SSRPPCQNGS DAEANPAANL TFCSYYQHSS ENSTTRP00000006306/1-428 ---------- LLGKPSQPSN SSRPPCQNGS DAEANTTANL TFSSYYQHSS 51 100 bmy_04431T0/1-322 ---------- ---------- -----FSFLR RR-------- ---------- ENSP00000277942/1-430 PVAAMFIVAY ALIFLLCMVG NTLVCFIVLK NRHMHTVTNM FILNLAVSDL ENSBTAP00000014519/1-443 PVAAMFIVAY VLIFLLCMVG NTLVCFIVLK NRHMRTVTNM FILNLAISDL BACU019205/1-416 LVAAMFIVAY VLIFLLCMVG NTLVCFIVLK NRHMRTVTNM FILNLAVSDL ENSTTRP00000006306/1-428 LVAAVFIVAY ALIFLLCMVG NTLVCFIVLK NRHMCTVTNM FILNLAVSDL 101 150 bmy_04431T0/1-322 ---------- ---------- ---------- ---------- ---------- ENSP00000277942/1-430 LVGIFCMPTT LVDNLITGWP FDNATCKMSG LVQGMSVSAS VFTLVAIAVE ENSBTAP00000014519/1-443 LVGIFCMPTT LVDNLITGWP FDNATCKMSG LVQGMSVSAS VFTLVAIAVE BACU019205/1-416 LVGIFCMPTT LVDNLITGWP FDNATCKMSG LVQGMSVSAS VFTLVAIAVE ENSTTRP00000006306/1-428 LVGIFCMPTT LVDNLITGWP FDNATCKMSG LVQGMSVSAS VFTLVAIAVE 151 200 bmy_04431T0/1-322 RFRCIVHPFR EKLTLRKALA TIAVIWTLAL LIMCPSAVTL TVTREEHHFM ENSP00000277942/1-430 RFRCIVHPFR EKLTLRKALV TIAVIWALAL LIMCPSAVTL TVTREEHHFM ENSBTAP00000014519/1-443 RFRCIVHPFR EKLTLRKALV TIAVIWALAL LIMCPSAITL TVTREEHHFM BACU019205/1-416 RFRCIVHPFR EKLTLRKALA TIAVIWTLAL LIMCPSAVTL TVTREEHHFM ENSTTRP00000006306/1-428 RFRCIVHPFR EKLTLRKALV TIVVIWALAL LIMCPSAVTL TVTREEHHFM 201 250 bmy_04431T0/1-322 VDARNRSYPL YSCWEAWPEK GMRRVYTAVL FSHIYLAPLA LIVGMYARIA ENSP00000277942/1-430 VDARNRSYPL YSCWEAWPEK GMRRVYTTVL FSHIYLAPLA LIVVMYARIA ENSBTAP00000014519/1-443 VDARNRSYPL YSCWEAWPEK GMRKVYTAVL FSHIYLAPLA LIVVMYARIA BACU019205/1-416 VDARNRSYPL YSCWEAWPEK GMRRVYTAVL FSHIYLAPLA LIVGMYARIA ENSTTRP00000006306/1-428 VDARNRSYPL YSCWEAWPEK GMRRVYTAVL FSHIYLAPLA LIVVMYARIA 251 300 bmy_04431T0/1-322 RKLCKAPGPA -RAGEEAAGE GGRGARRRAR VVHMLVMVAL FFTLSWLPLW ENSP00000277942/1-430 RKLCQAPGPA -PGGEEAADP --RASRRRAR VVHMLVMVAL FFTLSWLPLW ENSBTAP00000014519/1-443 RKLCQAPGPA CAGGEEAAGE GGRGARRRAR VVHMLVMVAL FFTLSWLPLW BACU019205/1-416 RKLCKAPGPA -RAGEEAAGE ------RXAR VVHMLVMVAL FFTLSWLPLW ENSTTRP00000006306/1-428 RKLCKAPGPA -RTGEEAAGE GGRGARRRAR VVHMLVMVAL FFTLSWLPLW 301 350 bmy_04431T0/1-322 ALLLLIDYGQ LSEPQLHLVT VYAFPLAHWL AFFNSSANPI IYGYFNENFR ENSP00000277942/1-430 ALLLLIDYGQ LSAPQLHLVT VYAFPFAHWL AFFNSSANPI IYGYFNENFR ENSBTAP00000014519/1-443 ALLLLIDYGQ LSEPQLHLVT AYAFPFAHWL AFFNSSANPI IYGYFNENFR BACU019205/1-416 ALLLLIDYGQ LSEPQLHLVT VYAFPLAHWL AFFNSSANPI IYGYFNENFH ENSTTRP00000006306/1-428 ALLLLIDYGQ LSEPQLHLVT VYAFPLAHWL AFFNSSANPI IYGYFNENFR 351 400 bmy_04431T0/1-322 RGFQAAFRAQ LCPPPWGSHR EASQRAPAHA GLRGGAAQRL GPSFRVGPEQ ENSP00000277942/1-430 RGFQAAFRAR LCPRPSGSHK EAYSERPGGL -LHRRVFVVV RPSDSGLPSE ENSBTAP00000014519/1-443 RGFQAAFRAQ LCAPPWGSHR EAYSQRASRL -LRTRVFVEV QPSDSGLPSE BACU019205/1-416 RGFQAAFRAQ LCPPP----- -----RPSGL -LRTRVFVEV QPSDSGLASE ENSTTRP00000006306/1-428 RGFQAAFRAQ LCPLPWGSHR E----RPSGL -LRTQVFVEV QPSDSGLTSE 401 450 bmy_04431T0/1-322 WGPQARPPPA AQWPRGPPWL GRRGSRLFPY APHHTSLGRL SGTWRAGP ENSP00000277942/1-430 SGPSSGAPRP GRLPLRNGRV AHHG--LPRE GPGCSHLPLT IPAWDI-- ENSBTAP00000014519/1-443 SGPSSGAPRP GRLPLRSGRV AHHS--LAAE GPGCSHLPLT IPAWDI-- BACU019205/1-416 SGPSSGAPRP GHLPLHNGRV APPG--LAAE GPGFSHMPLT IPAWDV-- ENSTTRP00000006306/1-428 SGSSSGAPRP GRLQLHSGHV APPG--LAAE GPGFSHTPLT IPAWGV--