KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:08 2014 Check: 00 .. Name: bmy_09910T0/1-296 Len: 322 Check: 3291 Weight: 1.00 Name: ENSBTAP00000014529/1-187 Len: 322 Check: 8319 Weight: 1.00 Name: ENSP00000310111/1-170 Len: 322 Check: 6930 Weight: 1.00 Name: BACU005681/1-192 Len: 322 Check: 2737 Weight: 1.00 Name: ENSTTRP00000014885/1-248 Len: 322 Check: 9460 Weight: 1.00 // 1 50 bmy_09910T0/1-296 ---------- ---------- -TRGWPRAQG RSGLIKGRQS GPGTLPPSLL ENSBTAP00000014529/1-187 ---------- ---------- ---------- ---------- ---------- ENSP00000310111/1-170 ---------- ---------- ---------- ---------- ---------- BACU005681/1-192 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014885/1-248 MPGSELSLLG LRVGLSAGPS HWRRFPASGP PRGLNLAGRQ GAGPAPRNGW 51 100 bmy_09910T0/1-296 PTRPPVYPAH RPGPGRPPVD EPQDLLHLQS GEKLPFFLLL LLLGLPHPSS ENSBTAP00000014529/1-187 -PALPVCPAR RPGPAAAP-- ---------- ---------- ---WMSHRTS ENSP00000310111/1-170 ---------- ---------- ---------- ---------- ----MSHRTS BACU005681/1-192 MEKALSMFSE DFGSFMRPHS EP-------- ---------- --LAFPGKSS ENSTTRP00000014885/1-248 PYKAAAAGA- RHAPSEPAAH APSCPPAHAR ARPRP----- ---WMSHRTS 101 150 bmy_09910T0/1-296 PGATHGEGVE HVLRGFRQLH AAPLGAPGLP RQ----VLRG EERCTGRGHL ENSBTAP00000014529/1-187 ST-------- --FRAERSFH SSSSSSSSAS H-----SLPA QDPPMEKALS ENSP00000310111/1-170 ST-------- --FRAERSFH SSSSSSSSST SSSASRALPA QDPPMEKALS BACU005681/1-192 VG-------- ---RGGAQGG DTCSRAPPD- ------VAAA AELPGTGAVQ ENSTTRP00000014885/1-248 ST-------- --FRAERSFH SSSSSSSASH ------TLPA QEPPMEKALS 151 200 bmy_09910T0/1-296 LQGTTRRGCS CRAAGNRCRT AAAACDHRDR CGQRDRCGRE NRQAFKKQLW ENSBTAP00000014529/1-187 MFSE-DFGGF MRP------- ---------- ---------- ---------- ENSP00000310111/1-170 MFSD-DFGSF MRP------- ---------- ---------- ---------- BACU005681/1-192 LQPRVTTGTD AAR------- ---------- ---------- ---------- ENSTTRP00000014885/1-248 MFSE-DFGSF MRP------- ---------- ---------- ---------- 201 250 bmy_09910T0/1-296 PGGQLHAPPL QAWALPTAHP GG-QGNIKTL GDAYEFAVDV SDFSPEDIIV ENSBTAP00000014529/1-187 -----HSEPL AFPALPTARA AG-PGNIKTL GDAYEFAVDV SDFSPEDIIV ENSP00000310111/1-170 -----HSEPL AFPARP---- GG-AGNIKTL GDAYEFAVDV RDFSPEDIIV BACU005681/1-192 -----ETDVA VRTGRPSRNS SGLGGNIKTL GDAYEFAVDV SDFSPEDIIV ENSTTRP00000014885/1-248 -----HSEPL AFPARP---- -G-AGNIKTL RDAYEFAVDV SDFSPEDIIV 251 300 bmy_09910T0/1-296 TTSNNNIEVR AEKLAADGTV MNTFAHKCQL PEDVDPTSVT SALREDGSLT ENSBTAP00000014529/1-187 TTSNNHIEVR AEKLAADGTV MNTFAHKCQL PEDVDPTSVT SALREDGSLT ENSP00000310111/1-170 TTSNNHIEVR AEKLAADGTV MNTFAHKCQL PEDVDPTSVT SALREDGSLT BACU005681/1-192 TTSNNNIEVR AEKLAADGTV MNTFAHKCQL PEDVDPTSVT SALREDGSLI ENSTTRP00000014885/1-248 TTSNNNIEVR AEKLAADGTV MNTFAHKCQL PEDVDPTSVT SALREDGSLT 301 350 bmy_09910T0/1-296 IRARRQPHTE HVQQIFRTEI KI ENSBTAP00000014529/1-187 IRARRQPPTE HVQQTFRTEI KI ENSP00000310111/1-170 IRARRHPHTE HVQQTFRTEI KI BACU005681/1-192 IRARRQPHTE HVQQIFRTEI KI ENSTTRP00000014885/1-248 IRARRQPHTE HVQQIFRTEI KI