KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:10 2014 Check: 00 .. Name: ENSP00000264896/1-478 Len: 481 Check: 9560 Weight: 1.00 Name: ENSBTAP00000014549/1-478 Len: 481 Check: 384 Weight: 1.00 Name: ENSTTRP00000013642/1-478 Len: 481 Check: 8321 Weight: 1.00 Name: bmy_18611T0/1-422 Len: 481 Check: 6640 Weight: 1.00 Name: BACU000802/1-478 Len: 481 Check: 8413 Weight: 1.00 // 1 50 ENSP00000264896/1-478 MGRCCFYTAG TLSLLLLVTS VTLLVARVFQ KAVDQSIEKK IVLRNGTEAF ENSBTAP00000014549/1-478 MGRCCFYAVG TLSLLLLVTS ITLLVARVFQ KAVDQTIEKN IVLRNGSETF ENSTTRP00000013642/1-478 MGRCCFYAVG TLSLLLLVTS VTLLVARVFQ KAVDQTIEKN IVLRNGSETF bmy_18611T0/1-422 ---------- ---------- ---------- ---------N IVLRNGSETF BACU000802/1-478 MGRCCFYVVG TLSLLLLVTS VTLLVARVFQ KAVDQTIEKN IVLRNGSETF 51 100 ENSP00000264896/1-478 DSWEKPPLPV YTQFYFFNVT NPEEILRGET PRVEEVGPYT YRELRNKANI ENSBTAP00000014549/1-478 DSWKKPPLPV YTQFYFFNVT NPEEILNGET PRLEEVGPYT YRELRNKDDI ENSTTRP00000013642/1-478 ESWRKPPLPV HTQFYFFNVT NPEEVLRGET PRLEEVGPYT YRELRNKEDI bmy_18611T0/1-422 ESWRKPPLPV HTQFYFFNVT NPEEVLRGET PRLEEVGPYT YRELRNKEDI BACU000802/1-478 ESWRKPPLPV HTQFYFFNVT NPEEVLRGET PRLEEVGPYT YRELRNKEDI 101 150 ENSP00000264896/1-478 QFGDNGTTIS AVSNKAYVFE RDQSVGDPKI DLIRTLNIPV LTVIEWSQVH ENSBTAP00000014549/1-478 QFGDNGTTIS AVSNKAYVFE RDKSVGDPKI DLLRTLNIPA LTAMEWTQLP ENSTTRP00000013642/1-478 QFGDNGTTIS AVSNKAYVFE RDKSVGDPKV DLLRTLNIPA LTAMEWAKLP bmy_18611T0/1-422 QFGDNGTTIS AVSNKAYVFE RDKSVGDPKI DLLRTLNIPA LTAMEWAQLP BACU000802/1-478 QFGDNGTTIS AVSNKAYVFE RDKSVGDPKI DLLRTLNIPA LTAMEWAQLP 151 200 ENSP00000264896/1-478 FLREIIEAML KAYQQKLFVT HTVDELLWGY KDEILSLIHV FRPDISPYFG ENSBTAP00000014549/1-478 LLRDIIEALL KAYRQKLFVT HTVDELLWGY KDEILSLINT FKHDVSPYFG ENSTTRP00000013642/1-478 FLHELIEALL KAYQQKLFVT HTVDELLWGY KDEILSLINI LKPDISPYFG bmy_18611T0/1-422 FLHELIEALL KAYQQKLFVT HTVDELLWGY KDEILSLINV FKPDISPYFG BACU000802/1-478 FLHELIEALL KAYQQKLFVT HTVDELLWGY KDEILSLINV FKPDISPYFG 201 250 ENSP00000264896/1-478 LFYEKNGTND GDYVFLTGED SYLNFTKIVE WNGKT---SL DWWITDKCNM ENSBTAP00000014549/1-478 LFYGKNGTND GDYVFLTGED NYLNFSKIVE WNGKT---SL DWWTADECNM ENSTTRP00000013642/1-478 LFYGKNGTND GDYVFLTGED NYLNFSKIVE WNGKT---SL DWWTADECNM bmy_18611T0/1-422 LFYGEKTK-- ---------- --------VA WNSRSLVESL DWWTADECNM BACU000802/1-478 LFYGKNGTND GDYVFLTGED NYLNFSKIVE WNGKT---SL DWWTADECNM 251 300 ENSP00000264896/1-478 INGTDGDSFH PLITKDEVLY VFPSDFCRSV YITFSDYESV QGLPAFRYKV ENSBTAP00000014549/1-478 INGTDGDTFH PLITRDEVLY VFPSDFCRSV YITFSDFESV QGLPALRYKV ENSTTRP00000013642/1-478 INGTDGDSFH PLITKDEILY VFPSDFCRSV YVTFSDFESV QGLPALRFKV bmy_18611T0/1-422 INGTDGDSFH PLITKDEILY VFPSDFCRSV YITFSDFESV QGLPALRYKV BACU000802/1-478 INGTDGDSFH PLITKDEILY VFPSDFCRSV YITFSDFESV QGLPALRYKV 301 350 ENSP00000264896/1-478 PAEILANTSD NAGFCIPEGN CLGSGVLNVS ICKNGAPIIM SFPHFYQADE ENSBTAP00000014549/1-478 PAEILANTSD NAGFCIPKGN CLGSGVLNVS VCKNGAPIIM SFPHFYQADE ENSTTRP00000013642/1-478 PAEILANTSD NAGFCIPKGN CLGSGVLNVS VCKNGAPIIM SFPHFYQADE bmy_18611T0/1-422 PAEILANTSD NAGFCIPKGN CLGSGVLNVS VCKNGAPIIM SFPHFYQADE BACU000802/1-478 PAEILANTSD NAGFCVPKGN CLGSGVLNVS VCKNGAPIIM SFPHFYQADE 351 400 ENSP00000264896/1-478 RFVSAIEGMH PNQEDHETFV DINPLTGIIL KAAKRFQINI YVKKLDDFVE ENSBTAP00000014549/1-478 KFVSAIGGMH PNKEYHETFV DINPLTGIIL RAAKRFQINV YVRKLDDFVE ENSTTRP00000013642/1-478 KFVSAIEGMH PNKDYHETFV DINPLTGIIL RAAKRFQINV YVKKLDDFIE bmy_18611T0/1-422 KFVSAIEGMH PNKEYHETFV DINPLTGIIL RAAKRFQINV YVKKLDDFIE BACU000802/1-478 KFVSAIEGMH PNKEYHETFV DINPLTGIIL RAAKRFQINV YVKKLDDFIE 401 450 ENSP00000264896/1-478 TGDIRTMVFP VMYLNESVHI DKETASRLKS MINTTLIITN IPYIIMALGV ENSBTAP00000014549/1-478 TGNIQTLVFP VMYINESVLI DKETASRLKS VINTTLIVTN IPYIIMALGV ENSTTRP00000013642/1-478 TGNIRTLVFP VMYINESVLI DKETASRLKS VINTTQIITN IPYIIMALGV bmy_18611T0/1-422 TGNIRTLVFP VMYINESVLI DKETASRLKS VINTTLIITN IPYIIMALGV BACU000802/1-478 TGNIRTLVFP VMYINESVLI DKETASRLKS VINTTLIITN IPYIIMALGV 451 500 ENSP00000264896/1-478 FFGLVFTWLA CKGQGSMDEG TADERAPLIR T ENSBTAP00000014549/1-478 FFGLIFTWLA CRGQGSTDEG TADERAPLIR T ENSTTRP00000013642/1-478 FFGLIFTWLA CRGQGSMDEG TADERAPLIR T bmy_18611T0/1-422 FFGLIFTWLA CRGRGSMDEG TADERAPLIR T BACU000802/1-478 FFGLIFTWLA CRGRGSTDEG TADERAPLIR T