KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:13 2014 Check: 00 .. Name: ENSP00000355925/1-737 Len: 745 Check: 3896 Weight: 1.00 Name: ENSBTAP00000014573/1-737 Len: 745 Check: 4852 Weight: 1.00 Name: ENSTTRP00000003190/1-744 Len: 745 Check: 7688 Weight: 1.00 Name: bmy_19580T0/1-692 Len: 745 Check: 132 Weight: 1.00 Name: BACU006055/1-601 Len: 745 Check: 1657 Weight: 1.00 // 1 50 ENSP00000355925/1-737 MPDHDSTALL SRQTKRRRVD IGVKRTVGTA SAFFAKARAT FFSAMNPQGS ENSBTAP00000014573/1-737 MPDHDSTALL SRQTKRRRVD IGVKRTVGTA SAFFAKARAT FFSAMNPQGS ENSTTRP00000003190/1-744 MPDHDSTALL SRQTKRRRVD IGVKRTVGTA SAFFAKARAT FFSAMNPQGS bmy_19580T0/1-692 MPDHDSTALL SRQTKRRRVD IGVKRTVGTA SAFFAKARAT FFSAMNPQGS BACU006055/1-601 MPDHDSTALL SRQTKRRRVD IGVKRTVGTA SAFFAKARAT FFSAMNPQGS 51 100 ENSP00000355925/1-737 EQDVEYSVVQ HADGEKSNVL RKLLKRANSY EDAMMPFPGA TIISQLLKNN ENSBTAP00000014573/1-737 EQDVEYSVVQ HADGEKSNVL RKLLKRANSY EDAMMPFPGA TIISQLLKNN ENSTTRP00000003190/1-744 EQDVEYSVVQ HADGEKSNVL RKLLKRANSY EDAMMPFPGA TIISQLLKNN bmy_19580T0/1-692 EQDVEYSVVQ HADGEKSNVL RKLLKRANSY EDAMMPFPGA TIISQLLKNN BACU006055/1-601 EQDVEYSVVQ HADGEKSNVL RKLLKRANSY EDAMMPFPGA TIISQLLKNN 101 150 ENSP00000355925/1-737 MNKNGGTEPS FQASGLSSTG SEVHQEDICS NSSRDSPPEC LSPFGRPTMS ENSBTAP00000014573/1-737 MNKNGGTEPS FQASGLSSTG SEVHQEDICS NSSRDSPPEC LSPFGRPTMS ENSTTRP00000003190/1-744 MNKNGGTEPS FQASGLSSTG SEVHQEDICS NSSRDSPPEC LSPFGRPTMS bmy_19580T0/1-692 MNKNGGTEPS FQASGLSSTG SEVHQEDICS NSSRDSPPEC LSPFGRPTMS BACU006055/1-601 MNKNGGTEPS FQASGLSSTG SEVHQEDICS NSSRDSPPEC LSPFGRPTMS 151 200 ENSP00000355925/1-737 QFDMDRLCDE HLRAKRARVE NIIRGMSHSP SVALRGNENE REMAPQSVSP ENSBTAP00000014573/1-737 QFDMDRLCDE HLRAKRARVE NIIRGMSHSP SVALRGNENE REMAPQSVSP ENSTTRP00000003190/1-744 QFDMDRLCDE HLRAKRARVE NIIRGMSHSP SVALRGNENE RDMAPQSVSP bmy_19580T0/1-692 QFDMDRLCDE HLRAKRARVE NIIRGMSHSP SVALRGNDNE RDMAPQSVSP BACU006055/1-601 QFDMDRLCDE HLRAKRARVE NIIRGMSHSP SVALRGNDNE RDMAPQSVSP 201 250 ENSP00000355925/1-737 RESYRENKRK QKLPQQQQQS FQQLVSARKE QKREERRQLK QQLEDMQKQL ENSBTAP00000014573/1-737 RESYRENKRK QKLPQQQQQS FQQLVSARKE QKREERRQLK QQLEDMQKQL ENSTTRP00000003190/1-744 RESYRENKRK QKLPQQQQQS FQQLVSARKE QKREERRQLK QQLEDMQKQL bmy_19580T0/1-692 RESYRENKRK QKLPQQQQQS FQQLVSARKE QKREERRQLK QQLEDMQKQL BACU006055/1-601 RESYRENKRK QKLPQQQQQS FQQLVSARKE QKREERRQLK QQLEDMQKQL 251 300 ENSP00000355925/1-737 RQLQEKFYQI YDSTDSENDE DGNLSEDSMR SEILDARAQD SVGRSDNEMC ENSBTAP00000014573/1-737 RQLQEKFYQI YDSTDSENDE DGNLSEDSMR SEILEARAQD SVGRSDNEMC ENSTTRP00000003190/1-744 RQLQEKFYQI YDSTDSENDE DGNLSEDSMR SEILDARAQD SVGRSDNEMC bmy_19580T0/1-692 RQLQEKFYQI YDSTDSENDE DGNLSEDSMR SEILDARAQD SVGRSDNEMC BACU006055/1-601 RQLQEKFYQI YDSTDSENDE DGNLSEDSMR SEILDARAQD SVGRSDNEMC 301 350 ENSP00000355925/1-737 ELDPGQFIDR ARALIREQEM AENKPKREGN NKERDHGPNS LQPEGKHLAE ENSBTAP00000014573/1-737 ELDPGQFIDR ARALIREQEM AENKPKREGS HKERDPGPNS LQPEGKHLAE ENSTTRP00000003190/1-744 ELDPGQFIDR ARALIREQEM AENKPKREGN NKERDHGPNS LQPEGKHLAE bmy_19580T0/1-692 ELDPGQFIDR ARALIREQEM AENKPKREGN NKERDHGPNS LQPEGKHLAE BACU006055/1-601 ELDPGQFIDR ARALIREQEM AENKPKREGN NKERDHGPNS LQPEGKHLAE 351 400 ENSP00000355925/1-737 TLKQELNTAM SQVVDTVVKV FSAKPSRQVP QVFPPLQIPQ ARFAVNGENH ENSBTAP00000014573/1-737 TLKQELNTAM SQVVDTVVKV FSAKPSRQVP QVFPPLQIPQ ARFAVNGENH ENSTTRP00000003190/1-744 TLKQELNTAM SQVVDTVVKV FSAKPSRQVP QVFPPLQIPQ ARFAVNGENH bmy_19580T0/1-692 TLKQELNTAM SQVVDTVVKV FSAKPSRQVP QVFPPLQIPQ ARFAVNGENH BACU006055/1-601 TLKQELNTAM SQVVDTVVKV FSAKPSRQVP QVFPPLQIPQ ARFAVNGENH 401 450 ENSP00000355925/1-737 NFHTANQRLQ CFGDVIIPNP LDTFGNVQMA SSTDQTEALP LVVRKNSSDQ ENSBTAP00000014573/1-737 NFHTANQRLQ CFGDVIIPNP LDTFGNVQMP GSTDQTEALP LVVRKNSSDQ ENSTTRP00000003190/1-744 NFHTANQRLQ CFGDVIIPNP LDTFGNVQMP SSTDQTEALP LVVRKNSSDQ bmy_19580T0/1-692 NFHTANQRLQ CFGDVIIPNP LDTFGNVQMP SSTDQTEALP LVVRKNSSDQ BACU006055/1-601 NFHTANQRLQ CFGDVIIPNP LDTFGNVQMP SSTDQTEALP LVVRKNSSDQ 451 500 ENSP00000355925/1-737 SASGPAAGGH HQPLHQSPLS ATTGFTTSTF RHPFPLPLMA YPFQSPLGAP ENSBTAP00000014573/1-737 SASGPPAGGH HQPLHQSPLS ATAGFTTSTF RHPFPLPLMA YPFQSPIGAP ENSTTRP00000003190/1-744 SASGPPAGGH HQPLHQSPLS ATAGFTTSTF RHPFPLPLMA YPFQSPLGAP bmy_19580T0/1-692 PASGPPAGGH HQPLHQSPLS ATAGFTTSTF RHPFPLPLMA YPFQSPLGAP BACU006055/1-601 SASGPPAGGH HQPLHQSPLS ATAGFTTSTF RHPFPLPLMA YPFQSPLGAP 501 550 ENSP00000355925/1-737 SGSFSGKDRA SPESLDLTRD TTSLRTKMSS HHLSHHPCSP AHPPSTAEGL ENSBTAP00000014573/1-737 TGSFSGKDRA SPESLDLTRE TTSLRTKMSS HHLSHHPCSP AHPPSTAEGL ENSTTRP00000003190/1-744 SGSFSGKDRA SPESLDLTRE TTSLRTKMSS HHLSHHPCSP AHPPSTAEGL bmy_19580T0/1-692 SGSFSGKDRA SPESLDLTRE TTSLRTKMSS HHLSHHPCSP AHPPSTAEGL BACU006055/1-601 SGSFSGKDRA SPESLDLTRE TTSLRTKMSS HHLSHHPCSP AHPPSTAEGL 551 600 ENSP00000355925/1-737 SLSLIKSECG DLQDMSEISP YSGSAMQEGL SPNHLKKAKL MFFYTRYP-S ENSBTAP00000014573/1-737 SLSLIKSECG DLQDMSEISP YSGSAMQEGL SPNHLKKAKL MFFYTRYP-S ENSTTRP00000003190/1-744 SLSLIKSECG DLQDMSEISP YSGSAMQEGL SPNHLKKAKL MFFYTRYP-S bmy_19580T0/1-692 SLSLIKSECG DLQDMSEISP YSGSAISFHL PPKENKPKP- ----KRLPRS BACU006055/1-601 SLSLIKSECG DLQDMSEISP YSGSAISFHL PPKENKPKP- ----KRLPRR 601 650 ENSP00000355925/1-737 SNMLKTYFSD VKFNRCITSQ LIKWFSNFRE FYYIQMEKYA RQAINDGVTS ENSBTAP00000014573/1-737 SNMLKTYFSD VKFNRCITSQ LIKWFSNFRE FYYIQMEKYA RQAINDGVTS ENSTTRP00000003190/1-744 SNMLKTYFSD VKFNRCITSQ LIKWFSNFRE FYYIQMEKYA RQAINDGVTS bmy_19580T0/1-692 SNMLKTYFSD VKFNRCITSQ LIKWFSNFRE FYYIQMEKYA RQAINDGVTS BACU006055/1-601 SGL------- ---------H II-------- ---------- ---------- 651 700 ENSP00000355925/1-737 TEELSITRDC ELYRALNMHY NKANDFEVPE RFLEVAQITL REFFNAIIAG ENSBTAP00000014573/1-737 TEELSITRDC ELYRALNMHY NKANDFEVPE RFLEVAQITL REFFNAIIAG ENSTTRP00000003190/1-744 TEELSITRDC ELYRALNMHY NKANDFEVFQ RDSWKLRRSH YGSFSMPLSH bmy_19580T0/1-692 TEELSITRDC ELYRALNMHY NKANDFEV-- ---------- ----GTHLCF BACU006055/1-601 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000355925/1-737 KDVDPSWKKA IYK-----VI CKLDSEVPEI FKSPNCLQEL LHE-- ENSBTAP00000014573/1-737 KDVDPSWKKA IYK-----VI CKLDSEVPEI FKSPNCLQEL LHE-- ENSTTRP00000003190/1-744 AKMLILPGRL YTRSSASWIV KSLRFSPQTA YKSCFMSRNF NNSFR bmy_19580T0/1-692 SVISLFFKKN YFL------- ---------- ---------- ----- BACU006055/1-601 ---------- ---------- ---------- ---------- -----