KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:14 2014 Check: 00 .. Name: ENSP00000265334/1-592 Len: 595 Check: 2197 Weight: 1.00 Name: ENSBTAP00000014574/1-591 Len: 595 Check: 9369 Weight: 1.00 Name: ENSTTRP00000015984/1-586 Len: 595 Check: 5465 Weight: 1.00 Name: bmy_03804T0/1-399 Len: 595 Check: 7911 Weight: 1.00 Name: BACU004074/1-591 Len: 595 Check: 8540 Weight: 1.00 // 1 50 ENSP00000265334/1-592 MEMYETLGKV GEGSYGTVMK CKHKNTGQIV AIKIFYERPE QSVNKIAMRE ENSBTAP00000014574/1-591 MEMYETLGKV GEGSYGTVMK CKHKDTGQIV AIKIFYEKPE KSVNKIAMRE ENSTTRP00000015984/1-586 MEMYETLGKV GEGSYGTVMK CKHKDTGQIV AIKVFYEKPE KSVNKIATRE bmy_03804T0/1-399 ---------- ---------- ---------- ---------- ---------- BACU004074/1-591 MEMYETLGKV GEGSYGTVMK CKHKDTGQIV AIKIFYEKPE KSVNKIATRE 51 100 ENSP00000265334/1-592 IKFLKQFHHE NLVNLIEVFR QKKKIHLVFE FIDHTVLDEL QHYCHGLESK ENSBTAP00000014574/1-591 IKFLKQFRHE NLVNLIEVFR QKKKIHLVFE FIDHTVLDEL QHYCHGLESK ENSTTRP00000015984/1-586 IKLLKXXXXX XXXXXXXXXX XXXXXHLVFE FNDHTVLDEL QQYCHGLESK bmy_03804T0/1-399 ---------- ---------- ---------- ---------- ---------- BACU004074/1-591 IKLLKQFRHE NLVNLIEVFR QKKKIHLVFE FIDHTVLDEL QHYCHGLESK 101 150 ENSP00000265334/1-592 RLRKYLFQIL RAIDYLHSNN IIHRDIKPEN ILVSQSGITK LCDFGFARTL ENSBTAP00000014574/1-591 RLRKYLFQIL RAIEYLHNNN IIHRDIKPEN ILVSQSGITK LCDFGFARTL ENSTTRP00000015984/1-586 R-RKYLFQIL RAIEYLHNNN IIHRDIKPEN ILVSQSGITK LCDFGFARTL bmy_03804T0/1-399 ---------- ---------- ---------- ---------- ---------- BACU004074/1-591 RLRKYLFQIL RAIEYLHNNN IIHRDIKPEN ILVSQSGITK LCDFGFARTL 151 200 ENSP00000265334/1-592 AAPGDIYTDY VATRWYRAPE LVLKDTSYGK PVDIWALGCM IIEMATGNPY ENSBTAP00000014574/1-591 AAPGDVYTDY VATRWYRAPE LVLKDTSYGK PVDIWALGCM IIEMATGNPY ENSTTRP00000015984/1-586 AAPGDIYTDY VATRWYRAPE LVLKDTSYGK PVDIWALGCM IIEMATGNPY bmy_03804T0/1-399 ---------- ---------- ---------- ---------M IIEMATGNPY BACU004074/1-591 AAPGDIYTDY VATRWYRAPE LVLKDTSYGK PVDIWALGCV IIEMATGNPY 201 250 ENSP00000265334/1-592 LPSSSDLDLL HKIVLKVGNL SPHLQNIFSK SPIFAGVVLP QVQHPKNARK ENSBTAP00000014574/1-591 LPSSSDLDLL HKIVLKVGNL TPHLQNIFSK SPIFAGVVLP QVQHPKSARK ENSTTRP00000015984/1-586 LPSSSDLDLL HKIVLKVGNL TPHLQNIFSK NPIFAGVVLP QVQHPKNARK bmy_03804T0/1-399 LPSSSDLDLL HKIVLKVGNL TPHLQNIFSK NPIFAGVVLP QVQHPKNARK BACU004074/1-591 LPSSSDLDLL HKIVLKVGNL TPHLQNIFSK NPIFAGVVLP QVQHPKNARK 251 300 ENSP00000265334/1-592 KYPKLNGLLA DIVHACLQID PADRISSSDL LHHEYFTRDG FIEKFMPELK ENSBTAP00000014574/1-591 KYPKLNGLLA DIVHACLQID PAERMSSTDL LHHEYFTRDG FIEKFIPELK ENSTTRP00000015984/1-586 KYPKLNGLLA DIVHACLQID PAERISSTDL LHHEYFTRDG FIEKFIPELR bmy_03804T0/1-399 KYPKLNVLLA DIVHACLQID SAERISSTDL LHHEYFTRDG FIEKFIPELR BACU004074/1-591 KYPKLNGLLA DIVHACLQID SAERISSTDL LHHEYFTRDG FIEKFIPELR 301 350 ENSP00000265334/1-592 AKLLQEAKVN SLIKPKESSK ENELRKDERK TVYTNTLLSS SVLGKEIEKE ENSBTAP00000014574/1-591 AKLLQEAKVN SFIKPKENSK ENDFMKEERK TIYTNTLQST SVWGKELEKE ENSTTRP00000015984/1-586 AKLLQEGKVN SFIKPKENSK ENEFMKDDRK TVYTDTLLST SVLGKEMEKK bmy_03804T0/1-399 AKLLQEAKVN SFIKPKENSK ENEFMKDDRK TIYTNTLLST SVLGKEMEKE BACU004074/1-591 AKLLQEAKVK SFIKPKENSK ENEFMKDDRK TIYTNTLLST SVLGKEMEKE 351 400 ENSP00000265334/1-592 KKPKEIKVRV IKVKGGRGDI SEPKKKEYEG GLGQQDANEN VHPMSPDTKL ENSBTAP00000014574/1-591 KRPKEIKVRV TKVKGGKGDI LEPKKIVCEG GHCQQVAAEI AHTMSQDTKP ENSTTRP00000015984/1-586 KKPKEIKVRV IKVKGGKGDI LEPKKIECEG GHFQQDAVEI AHTVSQDIKP bmy_03804T0/1-399 KKPKEIKVRV IKVKGGKGDI LEPEKIECEG GHCRQDAVEI AHTMSQDIKP BACU004074/1-591 KKPKEIKVRV IKVKGGKGDI LEPEKIECEG GHCQQDAVEI AHTMSQDIKP 401 450 ENSP00000265334/1-592 VTIEPPNPIN PSTNCNGLKE NPHCGGSVTM PPINLTNSNL MAANLSSNLF ENSBTAP00000014574/1-591 VISEPPNPVN PSTNAIGMKD DPCAGGGMVM PPINLTSSNL MASNPNSNLS ENSTTRP00000015984/1-586 VISGPPNPVN PSTNSMGMKD DPHAGSSMVM PPINLSSRNL MA----SNLF bmy_03804T0/1-399 VLSEPPNPVN PSTNSMGMKD DPHAGSSMVM PPINLTSRNL MASNPNSNLS BACU004074/1-591 VISEPPNPVN PSPNSMGMKD DPHAGSSMVM PPINLTSRNL MASNPNSNLS 451 500 ENSP00000265334/1-592 HPSVRLTERA KKRRTSSQSI GQVMPNSRQE DPGPIQSQME KGIFNERTGH ENSBTAP00000014574/1-591 HSNSRLTERA KKRRTSSQSI GQVISN-RHE DTGSTQSQME KCVFNERTSQ ENSTTRP00000015984/1-586 HYNSRLTERA KKRRTSSQSI GQVIFN-RHE DTGPTQSQME KGVFNERTGQ bmy_03804T0/1-399 HYNSRLTERA KKRRTSSQSI GQVISN-RHE DAGPTQSRME KGVFNERTGQ BACU004074/1-591 HYNSRLTERA KKRRTSSQSI GQVISN-RHE DAGPTQSQME KGVFNERTGQ 501 550 ENSP00000265334/1-592 SDQMANENKR KLNFSRSDRK EFHFPELPVT IQSKDTKGME VKQIKMLKRE ENSBTAP00000014574/1-591 TDQMANGNKR KLNFPRSDRK EFHFPELPFI IQSKEMKGME VKQIKVLKRE ENSTTRP00000015984/1-586 SDQMANGNKR KLNFSRTNRK EFHFPELPFT IQSKGMKGME VKQIKVMKRK bmy_03804T0/1-399 SDQMANGNKR KLNFSRTNRK EFHFPELPFT IQSKEMKGME VKQIKVLKRE BACU004074/1-591 SDQMANGNKR KLNFSRTNRK EFHFPELPFT IQSKEMKGME VKQIKVLKRV 551 600 ENSP00000265334/1-592 SKKTESSKIP TLLNVDQNQE KQEG-GDGHC EGKNLKRNR- -FFFW ENSBTAP00000014574/1-591 SKRTDSSKIP TLLNADQYQE KQED-GDGHC KGKNLKRNR- -LFFW ENSTTRP00000015984/1-586 SKKTDSSKIP --LNADQYQE KQEG-GDGHC KGKNLKRNRF FFFFW bmy_03804T0/1-399 SKKTDSSKIP TLLNADQYQE KQENTGNAQT ERKNLPDVE- ----- BACU004074/1-591 SKKTDSSKIP TLLNADQYQE KQEG-GDGHC KGKNLKRNR- -FFFW