KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:53:14 2014  Check: 00 ..

 Name: ENSBTAP00000014575/1-159  Len:    187  Check:  6671  Weight:  1.00
 Name: ENSTTRP00000015025/1-186  Len:    187  Check:  1900  Weight:  1.00
 Name: ENSP00000258930/1-187     Len:    187  Check:  1185  Weight:  1.00
 Name: bmy_13468T0/1-187         Len:    187  Check:  624  Weight:  1.00

//


                          1                                                   50
ENSBTAP00000014575/1-159  ---------- ---------- --------RL HARFYELAPN LVPMDYRKSP 
ENSTTRP00000015025/1-186  -MNKQTIFTE EQLDNYQDCT FFNKKDILKL HARFYELAPN IVPMDYRKSP 
ENSP00000258930/1-187     MGNKQTIFTE EQLDNYQDCT FFNKKDILKL HSRFYELAPN LVPMDYRKSP 
bmy_13468T0/1-187         MGNKQTIFTE EQLDNYQDCT FFNKKDILKL HARFYELAPN LVPMDYRKSP 


                          51                                                 100
ENSBTAP00000014575/1-159  IVHVPMSLII QMPELRENPF KERIVEAFSE DGEGNLTFND FVDMFSVLCE 
ENSTTRP00000015025/1-186  IVHVPMSVII QMPELRENPF KERIVESFSE DGDGNLTFND FVDMFSVLCE 
ENSP00000258930/1-187     IVHVPMSLII QMPELRENPF KERIVAAFSE DGEGNLTFND FVDMFSVLCE 
bmy_13468T0/1-187         IVHVPMSLII QMPELRENPF KERIVEAFSE DGEGNLTFND FVDMFSVLCE 


                          101                                                150
ENSBTAP00000014575/1-159  SAPRELKASY AFKIYDFNTD NFICKEDLQL TLARLTKSEL DEDEVVLVCD 
ENSTTRP00000015025/1-186  SAPRDLKANY AFKIYDFNTD NFICKEDLEL TLARLTKSEL DEDEVVLVCD 
ENSP00000258930/1-187     SAPRELKANY AFKIYDFNTD NFICKEDLEL TLARLTKSEL DEEEVVLVCD 
bmy_13468T0/1-187         SAPRDLKANY AFKIYDFNTD NFICKEDLEM TLARLTKSEL DEDEVVLVCD 


                          151                                                200
ENSBTAP00000014575/1-159  KVIEEADLDG DGKLGFADFE DMIAKAPDFL RCGSKGL 
ENSTTRP00000015025/1-186  KVIEEADLDG DGKLGFSDFE DMIAKAPDFL STFHVRI 
ENSP00000258930/1-187     KVIEEADLDG DGKLGFADFE DMIAKAPDFL STFHIRI 
bmy_13468T0/1-187         KVIEEADLDG DGKLGFADFE DMIAKAPDFL STFHIRI