KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:15 2014 Check: 00 .. Name: ENSP00000310832/1-484 Len: 484 Check: 560 Weight: 1.00 Name: ENSBTAP00000014587/1-460 Len: 484 Check: 9961 Weight: 1.00 Name: BACU003517/1-408 Len: 484 Check: 6935 Weight: 1.00 Name: bmy_07806T0/1-420 Len: 484 Check: 508 Weight: 1.00 Name: ENSTTRP00000006312/1-484 Len: 484 Check: 8272 Weight: 1.00 // 1 50 ENSP00000310832/1-484 MAPWLQLLSL LGLLPGAVAA PAQPRAASFQ AWGPPSPELL APTRFALEMF ENSBTAP00000014587/1-460 MAPWLQLLLL LGLLPAAAPA SSKPPAAGAQ AWELASPELR EPARFALEMY BACU003517/1-408 ---------- ---------- ---------- --------MY SPA----DTY bmy_07806T0/1-420 MAPWLQLLLL LGLLPGAAPA PNEPRTAGAQ AWELASPELL EPARFALEMY ENSTTRP00000006312/1-484 MAPWLQLLLL LGLLPGAAPA PNEPRAAGAQ AWELESPELL EPARFALEMY 51 100 ENSP00000310832/1-484 NRGRAAGTRA VLGLVRGRVR RAGQGSLYSL EATLEEPPCN DPMVCRLPVS ENSBTAP00000014587/1-460 NRGRAAGTRA ALGAVRGRVR RAGRGSLYSL KATLVEPPCN DPTVCQLPVS BACU003517/1-408 R----APARC -LGLL----- QAGQGSLYSL KATLVEPPCN DPTVCQLPVS bmy_07806T0/1-420 NRGRAARTRA ALRVVRGRVR RAGRGSLYSL KATLVEPPCN DPTVCQLPVS ENSTTRP00000006312/1-484 NRGRAARTRA ALRVVRGRVR RAGRGSLYSL KATLVEPPCN DPTVCQLRVS 101 150 ENSP00000310832/1-484 KKTLLCSFQV LDELGRHVLL RKDCGPVDTK VPGAGEPKSA FTQGSAMISS ENSBTAP00000014587/1-460 KKTLLCSFEV LDELGKHMLL RRDCGPVDTK TT-------- ---------- BACU003517/1-408 KKTLLCSFEV LNELGKHMLL RRDCGPVDTK IT-------- ---------- bmy_07806T0/1-420 KKTLLCSFEV LNELGKHMLL RRDCGPVDTK IT-------- ---------- ENSTTRP00000006312/1-484 KKTLLCSFEV LDELGKHMLL RQDCGPVDSK ITGAGKLRSD FPQGSVLISL 151 200 ENSP00000310832/1-484 LSQNHPDNRN ETFSSVISLL NEDPLSQDLP VKMASIFKNF VITYNRTYES ENSBTAP00000014587/1-460 ------DDRN ETFSSFLPLL NKDPLPQDFS VKMASIFKDF VTTYNRTYDS BACU003517/1-408 ------DDKN ETFSSFLPLL NKDPLPQDFS VKMASIFKDF VTTYNRTYDT bmy_07806T0/1-420 ------DDKN ETFSSFLPLL NKDPLSQDFS VKMASIFKDF VTTYNRTYDT ENSTTRP00000006312/1-484 FQLSPPDDKN ETFSSFLPLL NKDPLPQDFS VKMVSIFKDF VTTYNRTYET 201 250 ENSP00000310832/1-484 KEEARWRLSV FVNNMVRAQK IQALDRGTAQ YGVTKFSDLT EEEFRTIYLN ENSBTAP00000014587/1-460 QEEASWRMSV FANNMVRAQK IQALDRGTAR YGVTKFSDLT EEEFRTIYLN BACU003517/1-408 KEEARWRMSV FASNMVRAQK IQALDRGTAR YGVTKFSDLT EEEFRTIYLN bmy_07806T0/1-420 KEEARWRMSV FANNMVRAQK IQALDRGTAR YGVTKFSDLT EEEFRTIYLN ENSTTRP00000006312/1-484 TEEARWRMSV FANNMVRAQK IQALDRGTAR YGVTKFSDLT EEEFRTIYLN 251 300 ENSP00000310832/1-484 TLLRKEPGNK MKQAKSVGDL APPEWDWRSK GAVTKVKDQG MCGSCWAFSV ENSBTAP00000014587/1-460 PLLKDAPGRN MRPAQPVTDV PPPQWDWRNK GAVTNVKDQG MCGSCWAFSV BACU003517/1-408 PLLKEEPGKK MRLAQSIPDL PPPEWDWRSK GAVTKVKDQG MCGSCWAFSV bmy_07806T0/1-420 PLLKEEPGKK MRLAQSIPDL PPPEWDWRSK GAVTKVKDQG MCGSCWAFSV ENSTTRP00000006312/1-484 PLLKEEPGKR MRLAQSIPDL PPPEWDWRSK GAVTKVKDQG MCGSCWAFSV 301 350 ENSP00000310832/1-484 TGNVEGQWFL NQGTLLSLSE QELLDCDKMD KACMGGLPSN AYSAIKNLGG ENSBTAP00000014587/1-460 TGNVEGQWFL KRGTLLSLSE QELLDCDKTD KACLGGLPSN AYSAIRTLGG BACU003517/1-408 TGNVEGQWFL KRGALLSLSE QELLDCDKVD KACLGGLPSS AYSAIRTLGG bmy_07806T0/1-420 TGNVEGQWFL KRGALLSLSE QELLDCDKVD KACLGGLPSS AYSAIRTLGG ENSTTRP00000006312/1-484 TGNVEGQWFL KRGSLLSLSE QELLDCDKVD KACLGGLPSN AYSAIRTLGG 351 400 ENSP00000310832/1-484 LETEDDYSYQ GHMQSCNFSA EKAKVYINDS VELSQNEQKL AAWLAKRGPI ENSBTAP00000014587/1-460 LETEDDYSYR GRLQTCSFSA EKAKVYINDS VELSKNEQKL AAWLAKNGPV BACU003517/1-408 LETEDDYSYR GHLQTCSFSA EKAKVYINDS VELSQNEQKL AAWLAKKGPI bmy_07806T0/1-420 LETEDDYSYR GHLQTCSFSA EKAKVYINDS VELSQNEQKL AAWLAKKGPI ENSTTRP00000006312/1-484 LETEDDYSYH GHLQACSFSA DKAKVYINDS VELSQNELKL AAWLAKKGPI 401 450 ENSP00000310832/1-484 SVAINAFGMQ FYRHGISRPL RPLCSPWLID HAVLLVGYGN RSDVPFWAIK ENSBTAP00000014587/1-460 SIAINAFGMQ FYRHGISHPL RPLCSPWLID HAVLLVGYGN RSAIPFWAIK BACU003517/1-408 SVAINAFGMQ FYRHGISHPL RPLCSPWLID HAVLLVGYGN RSATPFWAIK bmy_07806T0/1-420 SVAINAFGMQ FYRHGISHPL RPLCSPWLID HAVLLVGYGN REFR------ ENSTTRP00000006312/1-484 SVAINAFGMQ FYRHGISHPL RPLCSPWLID HAVLLVGYGN RSATPFWAIK 451 500 ENSP00000310832/1-484 NSWGTDWGEK GYYYLHRGSG ACGVNTMASS AVVD ENSBTAP00000014587/1-460 NSWGTDWGEE GYYYLHRGSG ACGVNIMASS AVIN BACU003517/1-408 NSWGTDWGEE GYYYLHRGSG ACGVNIMASS AVVD bmy_07806T0/1-420 ---------- ---------- ---------- ---- ENSTTRP00000006312/1-484 NSWGTDWGEE GYYYLHRGSG ACGVNIMASS AVVD