KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:15 2014 Check: 00 .. Name: ENSP00000325663/1-718 Len: 736 Check: 4622 Weight: 1.00 Name: ENSBTAP00000014591/1-719 Len: 736 Check: 8340 Weight: 1.00 Name: BACU000028/1-732 Len: 736 Check: 2490 Weight: 1.00 Name: ENSTTRP00000006026/1-720 Len: 736 Check: 8906 Weight: 1.00 Name: bmy_19869T0/1-716 Len: 736 Check: 405 Weight: 1.00 // 1 50 ENSP00000325663/1-718 MIVDKLLDDS RGGEGLRDAA GGCGLMTSPL NLSYFYGASP PAAAPGACDA ENSBTAP00000014591/1-719 MIVDKLLDDS RGGEGLLDAA GDCGLMTSPL NLAYFYGASP PAAAPGACDG BACU000028/1-732 MTLDKLLDDS RGGEGLLDAA GDCGLMTSPL NLAYFYGASP PAAAPGAFDA ENSTTRP00000006026/1-720 MIVDKLLDDS RGGEGLLDAA GDCRLMTSPL NLAYFYGASP PAAAPGACDA bmy_19869T0/1-716 MIVDKLMDDS RGGEGLLDAV GDCGLMTSPL NLAYFYGASP PAAAPGAFDA 51 100 ENSP00000325663/1-718 SCSVLGPSAP GSPGSDSSDF SSASSVSSCG AVESRSRGGA RAE------- ENSBTAP00000014591/1-719 GCSASGPSAP GSPGSDSSDF SSASSVSSCG AVESRPRGGA RAE------- BACU000028/1-732 GCSSSGPSAP GPPXXXXXXX VLLR----GG RVPAERRRPC RAAARLWYIE ENSTTRP00000006026/1-720 GCSSSGPSAP GSPGSDSSDF SSASSVSSCG AVESRPRGGA RAE------- bmy_19869T0/1-716 GCSSSGPSAP GSPGSDSSDF SSASSVSSCG AVESRPRGGA RAE------- 101 150 ENSP00000325663/1-718 --------RQ PVEPHMGVGR QQRGPFQGVR VKNSVKELLL HIRSHKQKAS ENSBTAP00000014591/1-719 --------RL QVEPHMGVVR QQRGPFQGVR VKNSVKELLL HIRSHKQKAS BACU000028/1-732 IFGRSLFCTF LVEPHMGVGR QQRGPFQGVR VKNSVKELLL HIRSHKQKAS ENSTTRP00000006026/1-720 --------RL QVEPHMGVGR QQRGPFQGVR VKNSVKELLL HIRSHKQKAS bmy_19869T0/1-716 --------RL QVEPHMGVGR QQRGPFQGVR VKNSVKELLL HIRSHKQKAS 151 200 ENSP00000325663/1-718 GQAVDDFKTQ GVNIEQFREL KNTVSYSGKR KGPDSLSDGP ACKRPALLHS ENSBTAP00000014591/1-719 GQAVDDFKTQ SVNREQFTEL KNTVSYSGKR KGSDSLSDGP ACKRSALLHT BACU000028/1-732 GQAVDDFKTQ GVNREQFTEL KNTVSYSGKR KGPDILTDGP ACKRPALLHT ENSTTRP00000006026/1-720 GQAVDDFKTQ GVNREQFTEL KNTVSYSGKR KGPDLSSDGP ACKRPALLHT bmy_19869T0/1-716 GQA-----TQ GVNREQFTEL KNTVSYSGKR KGPDLLSDGP ACKRPALLHT 201 250 ENSP00000325663/1-718 QFLTPPQTPT PGESMEDVHL NEPKQESSAD LLQNIINIKN ECSPVSLNTV ENSBTAP00000014591/1-719 QFLTPPQTPT PAESMEDVHH NESKQDSCAD LLQNIINIKN ECSPVSLNTV BACU000028/1-732 QFLTPPQTPT PAESMEDVHH DESKQDSSAD LLQSIINIKN ECSLVSLNTV ENSTTRP00000006026/1-720 QFLTPPQTPT PAESMEDVHH NESKQDSSAD LLQSIINIKN ECSLVSLNTV bmy_19869T0/1-716 QFLTPPQTPT PAESMDDVHH DESKQDSSAD LLQSIINIKN ECSLVSLNTV 251 300 ENSP00000325663/1-718 QVSWLNPVVV PQSSPAEQCQ DFHGGQVFSP PQKCQPFQVR GSQQMIDQAS ENSBTAP00000014591/1-719 QVSWMSPGEV PQGSPHEQCQ DLHRGQVFSP PQKYQPFQVS SSPHMMDQAS BACU000028/1-732 QVSWMSPVGV PPSSPHEQCQ DFHGGQVFSP PQKYQPFQVS SSPHMMDQAS ENSTTRP00000006026/1-720 QVSWMRP-GV PPSSPQEQCQ DFHGGQVFSP PQKYQPFQVS SSPHMMDQAS bmy_19869T0/1-716 QVSWMSPVGV PPSSPHEQCQ DFHGGQVFSP PQKYQPFQVS SSPHVMDQAS 301 350 ENSP00000325663/1-718 LYQYSPQNQH VEQQP--HYT HKPTLEYSPF PIPPQSPAYE PNLFDGPESQ ENSBTAP00000014591/1-719 MYQYSPQNQS VQP-PPQHYT HNPALEYSPY SRTSQSPSYE PHLF-GREPQ BACU000028/1-732 MYQYSPQNQN VQQLPPQHYT HNPALEYSPY SRTSQSPGYE PNIFDGQEPQ ENSTTRP00000006026/1-720 MYQYSSQNQN VQQLPPQHYT HNPALEYSPY SRTSQSPSYE PNIFDGQEPQ bmy_19869T0/1-716 MYQYSPQSQN VQQLPPQHYA HSPALAYSPY SRTSQSPGYE PNIFDGQEPQ 351 400 ENSP00000325663/1-718 FCPNQSLVSL LGDQRESENI ANPMQTSSSV QQQNDAHLHS FSMMPSSACE ENSBTAP00000014591/1-719 FCPDQSFAPL LSDPRQSENI AVPPQTAPSV QQQIDTHLQN FSLMPPDTCE BACU000028/1-732 FCPNQSFASL LSDPRESENI AVPPQTAPSV QQQNDAHVQN FNMMPHSACE ENSTTRP00000006026/1-720 FCLNQSFASL LSGPRESENI AVPPQTAPSV QQQNDAHVQD FNMMSHSACE bmy_19869T0/1-716 FCPNQSFASL LSDPRESENI AVPLQTAPSV QQQNDAHVQN FNMMPHSACE 401 450 ENSP00000325663/1-718 AMVGHEMASD SSNTSLPFSN M-GNPMNTTQ LGKSLFQWQV EQEESKLANI ENSBTAP00000014591/1-719 ALARPDASST PLSTPLPFPN LGGNPMSTTQ LGKSFFQWQV EQEENKLANI BACU000028/1-732 ALARHDAGSA PLNAPPPFPN IVGNPMNTTQ LGKSFFQWQV EQEESKLAHI ENSTTRP00000006026/1-720 ALARHDAGSA PLNTPLPFPN IVGNPMNTTQ LGKSFFQWQV EQEESKLAHI bmy_19869T0/1-716 ALARHDAGSA PLNTPPPFPN IVGNPMNTTQ LGKSFFQWQV EQEESKLAHI 451 500 ENSP00000325663/1-718 SQDQFLSKDA DGDTFLHIAV AQGRRALSYV LARKMNALHM LDIKEHNGQS ENSBTAP00000014591/1-719 SQDQFLSKDA DGDTFLHIAV AQGRRALSYV LARKMNALHM LDIKEHNGQS BACU000028/1-732 SQDQFLSKDA DGDTFLHIAV AQGRRALSYV LARKMNALQM LDIKEHNGQS ENSTTRP00000006026/1-720 SQDQFLSKDA DGDTFLHIAV AQGRRALSYV LARKMNALHM LDIKEHNGQS bmy_19869T0/1-716 SQDQFLSKDA DGDTFLHIAV AQGRRALSYV LARKMNALQM LDIKEHNGQS 501 550 ENSP00000325663/1-718 AFQVAVAANQ HLIVQDLVNI GAQVNTTDCW GRTPLHVCAE KGHSQVLQAI ENSBTAP00000014591/1-719 AFQVAVAANQ HLIVQDLVTL GAQVNTTDCW GRTPLHVCAE KGHSQVLQAI BACU000028/1-732 AFQVAVAANQ HLIVQDLVNL GAQVNTTDCW GRTPLHVCAE KGHSQVLQAI ENSTTRP00000006026/1-720 AFQVAVAANQ HLIVQDLVNL GAQVNTTDCW GRTPLHVCAE KGHSQVLQAI bmy_19869T0/1-716 AFQVAVAANQ HLIVQDLVNL GAQVNTTDCW GRTPLHVCAE KGHSQVLQAI 551 600 ENSP00000325663/1-718 QKGAVGSNQF VDLEATNYDG LTPLHCAVIA HNAVVHELQR NQQPHSPEVQ ENSBTAP00000014591/1-719 QKGAAGSNQF VDLEATNYDG LTPLHCAVLA HNAVVHELQR NQQPHSPEVQ BACU000028/1-732 QKGAAGSNQF VDLEATNYDG LSPLHCAVVA HNAVVHELQR NQQPHSAEVQ ENSTTRP00000006026/1-720 QKGAAGSNQF VDLESTNYDG LTPLHCAVVA HNAVVHELQR NQQPHSPEVQ bmy_19869T0/1-716 QKGAAGSNQF VDLEATNYDG LSPLHCAVVA HNAVVHELQR NQQPHSPEVQ 601 650 ENSP00000325663/1-718 ELLLKNKSLV DTIKCLIQMG AAVEAKDRKS GRTALHLAAE EANLELIRLF ENSBTAP00000014591/1-719 ELLLKNKSLV DTIKCLIQMG AAVEAKDRKS GRTALHLAAE EANLELIRLF BACU000028/1-732 ELLLKNKSLV DTIKCLIQMG AAVEAKDRKS GRTALHLAAE EANLELIRLF ENSTTRP00000006026/1-720 ELLLKNKSLV DTIKCLIQMG AAVEAKDRKS GRTALHLAAE EANLELIRLF bmy_19869T0/1-716 ELLLKNKSLV DTIKCLIQMG AAVEAKDRKS GRTALHLAAE EANLELIRLF 651 700 ENSP00000325663/1-718 LELPSCLSFV NAKAYNGNTA LHVAASLQYR LTQLDAVRLL MRKGADPSTR ENSBTAP00000014591/1-719 LELPSCLSFV NAKAYNGNTA LHVAASLQYR VTQLDAVRLL MRKGADPSTR BACU000028/1-732 LELPSCLSFV NAKAYNGNTA LHVAASLQYR VTQLDAVRLL MRKGADPSTR ENSTTRP00000006026/1-720 LELPSCLSFV NAKAYNGNTA LHVAASLQYR VTQLDAVRLL MRKGADPSTR bmy_19869T0/1-716 LELPSCLSFV NAKAYNGNTA LHVAASLQYR VTQLDAVRLL MRKGADPSTR 701 750 ENSP00000325663/1-718 NLENEQPVHL VPDGPVGEQI RRILKGKSIQ QRAPPY ENSBTAP00000014591/1-719 NLENEQPVHL VPDGPVGEQI RRILKGKSIQ QRAPPY BACU000028/1-732 NLENEQPVHL VPDGPVGEQI RRILKGKSIQ QRAPPY ENSTTRP00000006026/1-720 NLENEQPVHL VPDGPVGEQI RRILKGKSIQ QRAPPY bmy_19869T0/1-716 NLENEQPVHL VPDGPVGEQI RRILKGKSIQ QRAPPY