KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:53:16 2014 Check: 00 .. Name: ENSP00000220166/1-335 Len: 335 Check: 8352 Weight: 1.00 Name: ENSTTRP00000015744/1-335 Len: 335 Check: 5456 Weight: 1.00 Name: ENSBTAP00000014593/1-335 Len: 335 Check: 6323 Weight: 1.00 Name: bmy_17284T0/1-293 Len: 335 Check: 719 Weight: 1.00 // 1 50 ENSP00000220166/1-335 MWATLPLLCA GAWLLGVPVC GAAELCVNSL EKFHFKSWMS KHRKTYSTEE ENSTTRP00000015744/1-335 MWAILPLLCG GAWLLGPTSC GAADLAVSSL EKFHFKSWML QYQKKYSSEE ENSBTAP00000014593/1-335 MWAVLPLLCA GAWLLGAPAC GAAELAANSL EKFHFQSWMV QHQKKYSSEE bmy_17284T0/1-293 MWAVLPLLCA GAWLLGPTAC GAADLAVSSL EKFHFKSWMV QHQKKYSSEE 51 100 ENSP00000220166/1-335 YHHRLQTFAS NWRKINAHNN GNHTFKMALN QFSDMSFAEI KHKYLWSEPQ ENSTTRP00000015744/1-335 YHHRLQAFVS NWRKINAHNA GNHTFKMGLN QFSDMSFAEL KRKYLWSEPQ ENSBTAP00000014593/1-335 YYHRLQAFAS NLREINAHNA RNHTFKMGLN QFSDMSFDEL KRKYLWSEPQ bmy_17284T0/1-293 YHHRLQAFVS NWRKINAHNA GNHTFKMGLN QFSDMSFAEL KRKYLWSEPQ 101 150 ENSP00000220166/1-335 NCSATKSNYL RGTGPYPPSV DWRKKGNFVS PVKNQGACGS CWTFSTTGAL ENSTTRP00000015744/1-335 NCSATKGNYL RGTGPYPPSM DWRKKGNFVS PVKNQGSCGS CWTFSTTGAL ENSBTAP00000014593/1-335 NCSATKSNYL RGTGPYPPSM DWRKKGNFVT PVKNQGSCGS CWTFSTTGAL bmy_17284T0/1-293 NCSATKGNYL RGTGPYPPSM DWRKKGNFVS PVKNQGSCGS CWTFSTTGAL 151 200 ENSP00000220166/1-335 ESAIAIATGK MLSLAEQQLV DCAQDFNNHG CQGGLPSQAF EYILYNKGIM ENSTTRP00000015744/1-335 ESAVAIATGR LPSLAEQQLV DCAQNFNNHG CQGXXXXXXX XXXXXXXXXX ENSBTAP00000014593/1-335 ESAVAIATGK LPFLAEQQLV DCAQNFNNHG CQGGLPSQAF EYIRYNKGIM bmy_17284T0/1-293 ESAVAIATGR LPSLAEQQLV DCAQNFNNHG CQGGLPSQAF EYIRYNKGIM 201 250 ENSP00000220166/1-335 GEDTYPYQGK DGYCKFQPGK AIGFVKDVAN ITIYDEEAMV EAVALYNPVS ENSTTRP00000015744/1-335 XXXXXXXXXX DGECKFQPSK AIAFVKDVAN ITMNDEEAMV EAVALYNPVS ENSBTAP00000014593/1-335 GEDTYPYRGQ DGDCKYQPSK AIAFVKDVAN ITLNDEEAMV EAVALHNPVS bmy_17284T0/1-293 GEDTYPYKGQ DGDCKFQPSK AIAFVKDVAN ITMNDEEAMV EAVALYNPVS 251 300 ENSP00000220166/1-335 FAFEVTQDFM MYRTGIYSST SCHKTPDKVN HAVLAVGYGE KNGIPYWIVK ENSTTRP00000015744/1-335 FAFEVIDDFL MYKKGVYSST SCHKTPNKVN HAVLAVGYGE KNGIPYWIVK ENSBTAP00000014593/1-335 FAFEVTADFM MYRKGIYSST SCHKTPDKVN HAVLAVGYGE EKGIPYWIVK bmy_17284T0/1-293 FAFEVTHDFL MYKKGVYSR- ---------- ---------- ---------- 301 350 ENSP00000220166/1-335 NSWGPQWGMN GYFLIERGKN MCGLAACASY PIPLV ENSTTRP00000015744/1-335 NSWGPQWGMK GYFLLERGKN MCGLAACASY PIPLV ENSBTAP00000014593/1-335 NSWGPNWGMK GYFLIERGKN MCGLAACASF PIPLV bmy_17284T0/1-293 ---------- -YFLMERGKN MCGLAACASY PIPLV