KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:18 2014 Check: 00 .. Name: ENSBTAP00000014608/1-455 Len: 486 Check: 3390 Weight: 1.00 Name: ENSP00000414150/1-486 Len: 486 Check: 9577 Weight: 1.00 Name: bmy_13041T0/1-390 Len: 486 Check: 7049 Weight: 1.00 Name: ENSTTRP00000014555/1-484 Len: 486 Check: 7002 Weight: 1.00 Name: BACU010440/1-139 Len: 486 Check: 2848 Weight: 1.00 // 1 50 ENSBTAP00000014608/1-455 -------MAS TIKEALSVVS EDQSLFECAY GTPHLPKTDM TASSSGDYGQ ENSP00000414150/1-486 MIQTVPDPAA HIKEALSVVS EDQSLFECAY GTPHLAKTEM TASSSSDYGQ bmy_13041T0/1-390 ---------- ---------- ---------- -------GRV GXDALESYG- ENSTTRP00000014555/1-484 -ILFHRSPGL FVQEALSVVS EDQSLFECAY GTPHLAKTDM TASSSSDYGQ BACU010440/1-139 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000014608/1-455 TSKMSPRVPQ QDWLSQPPAR VTIKMECNPN QVNGSRNSPD ECSMAKGGKM ENSP00000414150/1-486 TSKMSPRVPQ QDWLSQPPAR VTIKMECNPS QVNGSRNSPD ECSVAKGGKM bmy_13041T0/1-390 ---------- --WWEIPP-- ---------- ---------- ---------- ENSTTRP00000014555/1-484 TSKMSPRVPQ QDWLSQPPAR VTIKMECNPN QVNGSRNSPD ECSMAKGGKM BACU010440/1-139 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000014608/1-455 VGSPDTVGMN YSSYMEEKHM PPPNMTTNER RVIVPADPTL WSTDHVRQWL ENSP00000414150/1-486 VGSPDTVGMN YGSYMEEKHM PPPNMTTNER RVIVPADPTL WSTDHVRQWL bmy_13041T0/1-390 ---------- -GIWLYPRNL SS---GVDQI RFHPISDPML WSTDHVRQWL ENSTTRP00000014555/1-484 VGSTDTVGMN YSGYMEEKHM PPPNMTTNER RVIVPADPML WSTDHVRQWL BACU010440/1-139 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000014608/1-455 EWAVKEYGLP DVDILLFQNI DGKELCKMTK DDFQRLTPSY NADILLSHLH ENSP00000414150/1-486 EWAVKEYGLP DVNILLFQNI DGKELCKMTK DDFQRLTPSY NADILLSHLH bmy_13041T0/1-390 EWAVKEYGLP DVDILLFQNI DGKELCKMTK DDFQRLTPSY NADILLSHLH ENSTTRP00000014555/1-484 EWAVKEYGLP DVDILLFQNI DGKELCKMTK DDFQRLTPSY NADILLSHLH BACU010440/1-139 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000014608/1-455 YLRETPLPHL TSDDVDNVLQ NSPRLMHARN T--------- ---------- ENSP00000414150/1-486 YLRETPLPHL TSDDVDKALQ NSPRLMHARN TGGAAFIFPN TSVYPEATQR bmy_13041T0/1-390 YLRETPLPHL TSDDVDKALQ NSPRLMHARN TGGAAFIFPN TSVYPEATQR ENSTTRP00000014555/1-484 YLRETPLPHL TSDDVDKALQ NSPRLMHARN TGGAAFIFPN TSVYPEAT-R BACU010440/1-139 ---------- ---------- ---------- ---------- ---------- 251 300 ENSBTAP00000014608/1-455 -----DLPYE PPRRSAWTSH GHPAPQSKAA QPSPSTVPKT EDQRPQLDPY ENSP00000414150/1-486 ITTRPDLPYE PPRRSAWTGH GHPTPQSKAA QPSPSTVPKT EDQRPQLDPY bmy_13041T0/1-390 ITTRPDLPYE PPRRSAWTSH GHPTPQSKAA QPSPSTVPKT EDQRPQLDPY ENSTTRP00000014555/1-484 ITTRPDLPYE PPRRSAWTSH GHPTPQSKAA QPSPSTVPKT EDQRPQLDPY BACU010440/1-139 ---------- ---------- ---------- ---------- ---------- 301 350 ENSBTAP00000014608/1-455 QILGPTSSRL ANPGSGQIQL WQFLLELLSD SSNSNCITWE GTNGEFKMTD ENSP00000414150/1-486 QILGPTSSRL ANPGSGQIQL WQFLLELLSD SSNSSCITWE GTNGEFKMTD bmy_13041T0/1-390 QILGPTSSRL ANPGSGQIQL WQFLLELLSD SSNSNCITWE GTNGEFKMTD ENSTTRP00000014555/1-484 QILGPTSSRL ANPGSGQIQL WQFLLELLSD SSNSNCITWE GTNGEFKMTD BACU010440/1-139 ---------- ---------- ---------- ---------- -------MTD 351 400 ENSBTAP00000014608/1-455 PDEVARRWGE RKSKPNMNYD KLSRALRYYY DKNIMTKVHG KRYAYKFDFH ENSP00000414150/1-486 PDEVARRWGE RKSKPNMNYD KLSRALRYYY DKNIMTKVHG KRYAYKFDFH bmy_13041T0/1-390 PDEVARRWGE RKSKPNMNYD KLSRALRYYY DKNIMTKVHG KRYAYKFDFH ENSTTRP00000014555/1-484 PDEVARRWGE RKSKPNMNYD KLSRALRYYY DKNIMTKVHG KRYAYKFDFH BACU010440/1-139 PDEVARRWGE RKSKPNMNYD KLSRALRYYY DKNIMTKVHG KRYAYKFDFH 401 450 ENSBTAP00000014608/1-455 GIAQALQPHP PESSLYKYPS DLPYMGSYHA HPQKMNFVAP HPPALPVTSS ENSP00000414150/1-486 GIAQALQPHP PESSLYKYPS DLPYMGSYHA HPQKMNFVAP HPPALPVTSS bmy_13041T0/1-390 GIAQALQPHP PESSLYKYPS DLPYMGSYHT HPQKMNFVAP HPPALPVTSS ENSTTRP00000014555/1-484 GIAQALQPHP PESSLYKYPS DLPYMGSYHT HPQKMNFVAP HPPALPVTSS BACU010440/1-139 GIAQALQPHP PESSLYKYPS DLPYMGSYHT HPQKMNFVAP HPPALPVTSS 451 500 ENSBTAP00000014608/1-455 SFFAAPNPYW NSPTGGIYPS ARLPASHMPS HLGTYY ENSP00000414150/1-486 SFFAAPNPYW NSPTGGIYPN TRLPTSHMPS HLGTYY bmy_13041T0/1-390 SFFAAPNPYW NSPTGGIYPN TRLPASHMPS HLGTYY ENSTTRP00000014555/1-484 SFFAAPNPYW NSPTGGIYPN TRLPASHMPS HLGTYY BACU010440/1-139 SFFAAPNPYW NSPTGGIYPN TRLPASHMPS HLGTYY