KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:19 2014 Check: 00 .. Name: ENSP00000344544/1-509 Len: 565 Check: 6643 Weight: 1.00 Name: ENSBTAP00000014617/1-509 Len: 565 Check: 8135 Weight: 1.00 Name: bmy_12747T0/1-518 Len: 565 Check: 8138 Weight: 1.00 Name: BACU019422/1-488 Len: 565 Check: 8187 Weight: 1.00 Name: ENSTTRP00000007786/1-509 Len: 565 Check: 911 Weight: 1.00 // 1 50 ENSP00000344544/1-509 MEDIQTNAEL KSTQEQSVPA ESAAVLNDYS LTKSHEMENV DSGEGPANED ENSBTAP00000014617/1-509 MEDIKPNVEL KSTQEQSVPT EGSELLNDYD LTKAHETENV DGTEGPANED bmy_12747T0/1-518 ---------- ---------- ---------- -----MCPEK EGNESLSIPF BACU019422/1-488 ---------- ---------- -GSVLLHDYD LTKPHETENV DGTEGPANQD ENSTTRP00000007786/1-509 MEXXXXXXXX XXXXXXXXXX XGSVLLHDYD LTKPHETENV DGTEGPANQD 51 100 ENSP00000344544/1-509 EDIGDDSMKV KDEYSERDEN VLKSEPMGNA EEPEIPYSYS REYNEYENIK ENSBTAP00000014617/1-509 EDIGDDSMKV KDEYSERDEN VLKPEPMGNA EEPEIPYSYS REYNEYENIK bmy_12747T0/1-518 SSVSHDSMKV KDEYSEGDEN VLKPEPLGNA EEPEIPYSYS REYNEYENIK BACU019422/1-488 EDIGDDSMKV KDEYSEGDEN VLKPEPLGNA EEPEIPYSYS REYNEYENIK ENSTTRP00000007786/1-509 EDIGDDSMKV KDEYSEGDEN VLKPEPLGNA EEPEVPYSYS REYNEYENIK 101 150 ENSP00000344544/1-509 LERHVVSFDS SRPTSGKMNC DVCGLSCISF NVLMVHKRSH TGERPFQCNQ ENSBTAP00000014617/1-509 LERHVVSYDS SRPTSGKMNC DVCGLSCISF NVLMVHKRSH TGERPFQCNQ bmy_12747T0/1-518 LERHVVSYDS SRPTSGKMNC DVCGLSCISF NVLMVHKRSH TGERPFQCNQ BACU019422/1-488 LERHVVSYDS SRPTSGKMNC DVCGLSCISF NVLMVHKRSH TGERPFQCNQ ENSTTRP00000007786/1-509 LERHVVSYDS SRPTSGKMNC DVCGLSCISF NVLMVHKRSH TGERPFQCNQ 151 200 ENSP00000344544/1-509 CGASFTQKGN LLRHIKLHTG EKPFKCHLCN YACQRRDALT GHLRTHSVEK ENSBTAP00000014617/1-509 CGASFTQKGN LLRHIKLHTG EKPFKCHLCN YACQRRDALT GHLRTHSVEK bmy_12747T0/1-518 CGASFTQKGN LLRHIKLHTG EKPFKCHLCN YACQRRDALT GHLRTHSVEK BACU019422/1-488 CGASFTQKGN LLRHIKLHTG EKPFKCHLCN YACQRRDALT GHLRTHSVEK ENSTTRP00000007786/1-509 CGASFTQKGN LLRHIKLHTG EKPFKCHLCN YACQRRDALT GHLRTHSVEK 201 250 ENSP00000344544/1-509 PYKCEFCGRS YKQRSSLEEH KERCRTFLQS TDPGDTASAE ARHIKAEMGS ENSBTAP00000014617/1-509 PYKCEFCGRS YKQRSSLEEH KERCRTFLQS TDLGETASVH AKHLKSQQKN bmy_12747T0/1-518 PYKCEFCGRS YKQRSSLEEH KERC------ ------PSVE ARHIKAEMGS BACU019422/1-488 PYKCEFCGRS YKQRSSLEEH KERCRTFLQS TDLAETASVE ARHIKAEMGS ENSTTRP00000007786/1-509 PYKCEFCGRS YKQRSSLEEH KERCRTFLQS TDLAETASAE ARHIKAEMGS 251 300 ENSP00000344544/1-509 ERALVLDRLA SNVAKRKSSM PQKFIGEKRH CFDVNYNSSY MYEKESELIQ ENSBTAP00000014617/1-509 KRLTKMDRLA SNVAKRKSSM PQKFIGEKRH CFDVSYNPSY MYEKESEMIQ bmy_12747T0/1-518 ERALVLDRLA SNVAKRKSSM PQKFIGEKRH CFDVSYNPSY MYEKESEMIQ BACU019422/1-488 ERALVLDRLA SNVAKRKSSM PQKFIGEKRH CFDVSYNPSY MYEKESEMIQ ENSTTRP00000007786/1-509 ERALVLDRLA SNVAKRKSSM PQKFIGEKRH CFDVTYNPSY VYEKESEIIQ 301 350 ENSP00000344544/1-509 TRMMDQAINN AISYLGAEAL RPLVQTPPAP TSEMVPVISS MYPIALTRAE ENSBTAP00000014617/1-509 TRMMDQAINN AISYLGAEAL RPLVQTPPAP TSEMVPVISS MYPIALTRAE bmy_12747T0/1-518 TRMMDQAINN AISYLGAEAL RPLVQTPPAP TSEMVPVISS MYPIALTRAE BACU019422/1-488 TRMMDQAINN AISYLGAEAL RPLVQTPPAP TSEMVPVISS MYPIALTRAE ENSTTRP00000007786/1-509 TRMMDQAINN AISYLGAEAL RPLVQTPPAP TSEMVPVISS MYPIALTRAE 351 400 ENSP00000344544/1-509 MSNGAPQELE KKSIHLPEKS VPSERGLSPN NSGHDSTDTD SNHEERQNHI ENSBTAP00000014617/1-509 MPNGAPQELE KKNIHLPEKS LPSERGLSPT NSGHDSTDTD SNHEERQNHI bmy_12747T0/1-518 MPNGAPQDLE KKNVQLPEKS LPSERGLSPN NSGHDSTDTD SNHEERQNHI BACU019422/1-488 MPNGAPQDLE KKNVQLPEKS LPSERGLSPN NSGHDSTDTD SNHEERQNHI ENSTTRP00000007786/1-509 MPNGAPQDLE KKNVQLPEKS LPSERGLSPN NSGHDSTDTD SNHEERQNHI 401 450 ENSP00000344544/1-509 YQQNHMVLSR ARNGMPLLKE VPRSYELLKP PPICPRDSVK VINKEGEVMD ENSBTAP00000014617/1-509 YQQNPMVPPR ARNGMPLLKE GPRSYDLLKP PPICPRDSIK VINKEGEVTD bmy_12747T0/1-518 YQQNHVVPPR ARNGMPLLKE VPRSYELLKP PPICPRDSIK VINKEGEVMD BACU019422/1-488 YQQNHVVPPR ARNGMPLLKE VPRSYELLKP PPICPRDSIK VINKEGEVMD ENSTTRP00000007786/1-509 YQQNHMVPSR ARNGMPLLKE VPRSYELLKP PPICPRDSIK VINKEGEVMD 451 500 ENSP00000344544/1-509 VYRCDHCRVL FLDYVMFTIH MGCHGFRDPF ECNMCGYRSH DRYEFSSHIA ENSBTAP00000014617/1-509 VYRCDHCRVL FLDYVMFTIH MGCHGFRDPF ECNMCGYRSH DRYEFSSHIA bmy_12747T0/1-518 VYRCDHCRVL FLDYVMFTIH MGCHGFRDPF ECNMCGYRSH DRYEFSSHIA BACU019422/1-488 VYRCDHCRVL FLDYVMFTIH MGCHGFRDPF ECNMCGYRSH DRYEFSSHIA ENSTTRP00000007786/1-509 VYRCDHCRVL FLDYVMFTIH MGCHGFRDPF ECNMCGYRSH DRYEFSSHIA 501 550 ENSP00000344544/1-509 RGEHRALLK- ---------- ---------- ---------- ---------- ENSBTAP00000014617/1-509 RGEHRAMLK- ---------- ---------- ---------- ---------- bmy_12747T0/1-518 RGEHRAMLKT YVRENKFRFQ GQLHGAYLQI KSQLCEHFYQ SQESTIPGGL BACU019422/1-488 RGEHRAMLK- ---------- ---------- ---------- ---------- ENSTTRP00000007786/1-509 RGEHRAMLK- ---------- ---------- ---------- ---------- 551 600 ENSP00000344544/1-509 ---------- ----- ENSBTAP00000014617/1-509 ---------- ----- bmy_12747T0/1-518 AFYVSALIFR KGFMH BACU019422/1-488 ---------- ----- ENSTTRP00000007786/1-509 ---------- -----