KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:21 2014 Check: 00 .. Name: ENSP00000362207/1-479 Len: 491 Check: 9949 Weight: 1.00 Name: ENSBTAP00000014629/1-479 Len: 491 Check: 8302 Weight: 1.00 Name: ENSTTRP00000009203/1-472 Len: 491 Check: 5940 Weight: 1.00 Name: bmy_18781T0/1-483 Len: 491 Check: 3068 Weight: 1.00 Name: BACU001920/1-483 Len: 491 Check: 3764 Weight: 1.00 // 1 50 ENSP00000362207/1-479 ------MEKG LTLPQDCRDF VHSLKMRSKY ALFLVFVVIV FVFIEKENKI ENSBTAP00000014629/1-479 ------MEKG LSLPQDCRHF LHSLRMRSKY ALFLAFVVVV FVFIEKENKI ENSTTRP00000009203/1-472 ------MEKG LTLPQDCRHF LHSLRMRSKY ALFLAFVVVV FVFIEKENKI bmy_18781T0/1-483 MAPHFPMEKG LTLPQDCRHF LHSLRMRSKY ALFLAFVVVV FVFIEKENKI BACU001920/1-483 MAPPFPMEKG LTLPQDCRHF LHSLRMRSKY ALFLAFVVVV FVFIEKENKI 51 100 ENSP00000362207/1-479 ISRVSDKLKQ IPQALADANS TDPALILAEN ASLLSLSELD SAFSQLQSRL ENSBTAP00000014629/1-479 ISRVSDKLKQ IPQSLVDANS TDPALVLAEN ASLLSLSELD SAFLQLQSRL ENSTTRP00000009203/1-472 ISRVSDKLKQ IPQSPADANS TDPALVLAEN ASLLSLSELD SAFTQLQSRL bmy_18781T0/1-483 ISRVSDKLKQ IPQSLVDANS TDPALALAEN ASLLSLSELD SAFTQLQSRL BACU001920/1-483 ISRVSDKLKQ IPQSLVDANS TDPALVLAEN ASLLSLSELD SAFTQLQSRL 101 150 ENSP00000362207/1-479 RNLSLQLGVE PAMEAAGEE- -----EEEQR KEEEPPRPAV AGPRRHVLLM ENSBTAP00000014629/1-479 RNLSLQLGME PAEEAEEEQT LEAEEEWE-- -QLEPRPPAE APPRRHVLLM ENSTTRP00000009203/1-472 RNLSLQLGVA PAEEAGG--- -------DHR GEQESRPPAE APPRRHLLLM bmy_18781T0/1-483 RNLSLQLGVA PAEEAEEETA -----EWEQG QQQESRPPAE APPRRHLLLM BACU001920/1-483 RNLSLQLGVA PAEEAAEETA -----EWEPE QQQESRPPAE APPRRHLLLM 151 200 ENSP00000362207/1-479 ATTRTGSSFV GEFFNQQGNI FYLFEPLWHI ERTVSFEPGG ANAAGSALVY ENSBTAP00000014629/1-479 ATTRTGSSFV GEFFNQQGNI FYLFEPLWHI ERTVSFEQGG ANAAGSALVY ENSTTRP00000009203/1-472 ATTRTGSSFV GEFFNQQGNI FYLFEPLWHI ERTVSFEQGG ANAAGSALVY bmy_18781T0/1-483 ATTRTGSSFV GEFFNQQGNI FYLFEPLWHI ERTVSFEQGG ANAAGSALVY BACU001920/1-483 ATTRTGSSFV GEFFNQQGNI FYLFEPLWHI ERTVSFEQGG ANAAGSALVY 201 250 ENSP00000362207/1-479 RDVLKQLFLC DLYVLEHFIT PLPEDHLTQF MFRRGSSRSL CEDPVCTPFV ENSBTAP00000014629/1-479 RDVLKQLFLC DLYILEHFII PAPEDHLTQF VFRRGSSRSL CEDPVCTPLV ENSTTRP00000009203/1-472 RDVLKQLFLC DLYLLEHFII PAPEDHLTQF VFRRGSSRSL CEDPVCTPLV bmy_18781T0/1-483 RDVLKQLFLC DLYLLEHFII PAPEDHLTQF VFRRGSSRSL CEDPVCTPLV BACU001920/1-483 RDVLKQLFLC DLYLLEHFII PAPEDHLTQF VFRRGSSRSL CEDPVCTPLV 251 300 ENSP00000362207/1-479 KKVFEKYHCK NRRCGPLNVT LAAEACRRKE HMALKAVRIR QLEFLQPLAE ENSBTAP00000014629/1-479 KKVFEKYPCK NRRCGPLNMT LAAEACRRKE HMAIKAVRIR QLEFLQPLAE ENSTTRP00000009203/1-472 KKVFEKYPCK NRRCGLLNMT LASEACRRKE HMAIKAVRIR QLEFLQPLAE bmy_18781T0/1-483 KKVFEKYPCK NRRCGLLNMT LAAEACRRKE HMAIKAVRIR QLEFLQPLAE BACU001920/1-483 KKVFEKYPCK NRRCGLLNMT LAAEACRRKE HMAIKAVRIR QLEFLQPLAE 301 350 ENSP00000362207/1-479 DPRLDLRVIQ LVRDPRAVLA SRMVAFAGKY KTWKKWLDDE GQDGLREEEV ENSBTAP00000014629/1-479 DPRLDLRVIQ LVRDPRAVLA SRMVAFADKY ETWKNWL-AK GQDQLREEEV ENSTTRP00000009203/1-472 DPRLDLRVIQ LVRDPRAVLA SRMVAFADKY ETWKNWL-AK GQDQLREEEV bmy_18781T0/1-483 DPRLDLRVIQ LVRDPRAVLA SRMVAFADKY ETWKKWL-AK GQDQLREEEV BACU001920/1-483 DPRLDLRVIQ LVRDPRAVLA SRMVAFADKY ETWKKWL-AQ GQDQLREEEV 351 400 ENSP00000362207/1-479 QRLRGNCESI RLSAELGLRQ PAWLRGRYML VRYEDVARGP LQKAREMYRF ENSBTAP00000014629/1-479 LRLKGNCESI RLSAELGLRQ PAWLRGRYML VRYEDVALRP LQKAQEMYRF ENSTTRP00000009203/1-472 LRLKGNCESI RLSAELGLRQ PAWLRGRYML VRYEDVALRP LQKAQEMYRF bmy_18781T0/1-483 QRLKGNCESI RQSAELGLRQ PAWLRGRYML VRYEDVALRP LQKAQEMYRF BACU001920/1-483 QRLKGNCESI RQSAELGLRQ QAWLRGRYML VRYEDVALRP LQKAQEMYRF 401 450 ENSP00000362207/1-479 AGIPLTPQVE DWIQKNTQAA HDGSGIYSTQ KNSSEQFEKW RFSMPFKLAQ ENSBTAP00000014629/1-479 AGIPLTPQVE DWIQKNTQAA HD--GIYSTQ KNSSEQFEKW RFSMPFKLAQ ENSTTRP00000009203/1-472 AGIPLTPQVE DWIQKNTQAA HD--GIYSTQ KNSSEQFEKW RFSMPFKLAQ bmy_18781T0/1-483 AGIPLTPQVE DWIQKNTQAA HD--GIYSTQ KNSSEQFEKW RFSMPFKLAQ BACU001920/1-483 AGIPLTPQVE DWIQKNTQAA HD--GIYSTQ KNSSEQFEKW RFSMPFKLAQ 451 500 ENSP00000362207/1-479 VVQAACGPAM RLFGYKLARD AAALTNRSVS LLEERGTFWV T ENSBTAP00000014629/1-479 VVQAACGPAM RLFGYKPVQD AASLSNRSVS LLEERGTFWV T ENSTTRP00000009203/1-472 VVQAACGPAM RLFGYKPVQD AASLSNRSVS LLEERGTFWV T bmy_18781T0/1-483 VVQAACGPAM RLFGYKPVQD AASLSNRSVS LLEERGTFWV T BACU001920/1-483 VVQAACGPAM RLFGYKLVQD AASLSNRSVS LLEERGTFWV T