KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:27 2014 Check: 00 .. Name: ENSBTAP00000014674/1-289 Len: 295 Check: 3196 Weight: 1.00 Name: ENSP00000371307/1-295 Len: 295 Check: 6011 Weight: 1.00 Name: ENSTTRP00000015663/1-290 Len: 295 Check: 1939 Weight: 1.00 Name: bmy_09763T0/1-291 Len: 295 Check: 1718 Weight: 1.00 Name: BACU009461/1-204 Len: 295 Check: 8609 Weight: 1.00 // 1 50 ENSBTAP00000014674/1-289 MQSPRRNAEG RPLGTCDPSS S---GSPAHG GGS---RFEF QSLLSSRMPG ENSP00000371307/1-295 MPSPRRSMEG RPLGVSASSS SSSPGSPAHG GGGGGSRFEF QSLLSSRATA ENSTTRP00000015663/1-290 MPSPRRNAEG RPLAACAPSS S---GSPAHG GGG-G-RFEF QSLLSSRAPG bmy_09763T0/1-291 MPSPRRNAEG RPLAACAPSS S---GSPAQG GGGRG-RFEF QSLLSSRAPG BACU009461/1-204 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000014674/1-289 ADPTSARLRA SESPVHRRGS FPLAGAGSSQ ALPPQLPEED RIDLNPSFLG ENSP00000371307/1-295 VDPTCARLRA SESPVHRRGS FPLAAAGPSQ SPAPPLPEED RMDLNPSFLG ENSTTRP00000015663/1-290 TDPTCARLRA SESPVHRRGS FPLAGAGSSP ALPSPLPEED RMDLNPSFLG bmy_09763T0/1-291 ADPTCAQLRA SESPVHRRGS FPLAGAGSSP ALPPPLPEED RMDLNPSFLG BACU009461/1-204 ---------- ---------- ---------- ---------- -MDLNPSFLG 101 150 ENSBTAP00000014674/1-289 IALRSLLAID LWLSKKLGVC AGESSSWGSM RPLMKLLEIS GHGIPWLLGT ENSP00000371307/1-295 IALRSLLAID LWLSKKLGVC AGESSSWGSV RPLMKLLEIS GHGIPWLLGT ENSTTRP00000015663/1-290 IALRSLLAID LWLSKKLGVC AGESSSWGSV RPLMKLLEIS GHGIPWLLGT bmy_09763T0/1-291 IALRSLLAID LWLSKKLGVC AGESSSWGSV RPLMKLLEIS GHGIPWLLGT BACU009461/1-204 IALRSLLAID LWLSKKLGVC AGESSSWGSV RPLMKLLEVS GHGIPWLLGT 151 200 ENSBTAP00000014674/1-289 LYCLSRSDSW AGREVLMNLL FALLLDLLLV SLIKGLVRRR RPAHNQMDMF ENSP00000371307/1-295 LYCLCRSDSW AGREVLMNLL FALLLDLLLV ALIKGLVRRR RPAHNQMDMF ENSTTRP00000015663/1-290 LYCLSRSDSW AGREVLMNLL FSLLLDLLLV ALIKGLVRRR RPAHNQMDMF bmy_09763T0/1-291 LYCLSRSDSW AGREVLMNLL FSLLLDLLLV ALIKGLVRRR RPAHNQMDMF BACU009461/1-204 LYCLSRSDSC AGREVLMNLL FSLLLDLLLV ALIKGLVRRR RPAHNQMDMF 201 250 ENSBTAP00000014674/1-289 FTISVDKYSF PSGHTTRAAL VSRFILNHLV LAIPLRVLVV LWAFILGLSR ENSP00000371307/1-295 VTLSVDKYSF PSGHATRAAL MSRFILNHLV LAIPLRVLVV LWAFVLGLSR ENSTTRP00000015663/1-290 FTLSVDKYSF PSGHATRAAL VSRFILNHLV LAIPLRVLVV LWAFILGLSR bmy_09763T0/1-291 FTLSVDKYSF PSGHATRAAL VSRFILKHLV LAIPLRVLVV LWAFILGLSR BACU009461/1-204 FTLSVDKYSF PSGHATRAAL VSRFILNHLV LAIPLRVLVV LWAFILGLSR 251 300 ENSBTAP00000014674/1-289 VMLGRHNVTD VAFGFFLGYM QYSIVDYCWL SPRTAPVLFV LWNQP ENSP00000371307/1-295 VMLGRHNVTD VAFGFFLGYM QYSIVDYCWL SPHNAPVLFL LWSQR ENSTTRP00000015663/1-290 VMLGRHNVTD VAFGFFLGYM QYSIVDYCWL SPHNAPVLFV LWNQP bmy_09763T0/1-291 VMLGRHNVTD VAFGFFLGYM QYSIVDYCWL SPHNAPVLFV LWNQQ BACU009461/1-204 VMLGRHNVTD VAFGFFLGYM QYSIVDYCWL SPHNAPVLFV LWNQQ