KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:53:27 2014 Check: 00 .. Name: ENSBTAP00000014683/1-546 Len: 551 Check: 7138 Weight: 1.00 Name: ENSTTRP00000010050/1-544 Len: 551 Check: 2123 Weight: 1.00 Name: bmy_22216T0/1-516 Len: 551 Check: 2945 Weight: 1.00 Name: BACU007781/1-551 Len: 551 Check: 3118 Weight: 1.00 // 1 50 ENSBTAP00000014683/1-546 MPPPSRSLLW LGLVLGAVCA SRGPAA---- PGNATDPLNV LLIIVDDLRP ENSTTRP00000010050/1-544 MLPPGGGLLW LGLVLGSVGS AAL------- GSSATDALNV LLIIVDDLRP bmy_22216T0/1-516 ---------- ---------- ---------- -----DALNV LLIIVDDLRP BACU007781/1-551 MPVSPPRLLA PRVVTSCVQT PQSLVVVLSD HEGGSHALNV LLIIVDDLRP 51 100 ENSBTAP00000014683/1-546 SLGCYGNKLI RSPNIDQLAS RSLLFQNAFA QQAVCAPSRV SFLTGRRPDT ENSTTRP00000010050/1-544 SLGCYGDKLI RSPNMDQLAS RSLLFQNAFA QQAVCAPSRV SLLTGRRPDT bmy_22216T0/1-516 SLGCYGDKLI RSPNVDQLAS HSLLFQNAFA QQAVCAPSRV SLLTGRRPDT BACU007781/1-551 SLGCYGDKLI RSPNMDQLAS HSLLFQNAFA QQAVCAPSRV SLLTGRRPDT 101 150 ENSBTAP00000014683/1-546 TRLYDFNSYW RVHAGNFSTI PQYFKENGYV TMSVGKVFHP GISSNHSDDS ENSTTRP00000010050/1-544 TRLYDFNSYW RAHSGNFSTI PQYFKENGYV TMSVGKVFHP GVSSNHSDDS bmy_22216T0/1-516 TRLYDFNSYW RAHSGNFSTI PQYFKENGYV TMSVGKVFHP GVSSNHSDDS BACU007781/1-551 TRLYDFNSYW RAHSGNFSTI PQYFKENGYV TMSVGKVFHP GVSSNHSDDC 151 200 ENSBTAP00000014683/1-546 PYSWSVPPYH PSSEKYENTK TCRGPDGELH ANLLCPVDVV DVPEGTLPDK ENSTTRP00000010050/1-544 PYSWSVPPYH PSSEKYENTK TCRGPDGELH ANLLCPVDVA DVPEGTLPDK bmy_22216T0/1-516 PYSWSVPPYH PSSEKYENTK TCRGPDGELH ANLLCPVDVA DVPEGTLPDK BACU007781/1-551 PYSWSVPPYH PSSEKYENTK TCRGPDGELH ANLLCPVDVA DVPEGTLPDK 201 250 ENSBTAP00000014683/1-546 QSTEQAIQLL GKMKTSASPF FLAVGYHKPH IPFRYPKEFQ KLYPLENVSL ENSTTRP00000010050/1-544 QSTEQAVRLL GKMKTSGSPF FLAVGYHKPH IPFRYPKEFQ KLYPLENITL bmy_22216T0/1-516 QSTEQAIRLL GKMKTSASPF FLAVGYHKPH IPFRYPKEFQ KLYPLENITL BACU007781/1-551 QSTEQAIRLL GKMKTSASPF FLAVGYHKPH IPFRYPKEFQ KLYPLENITL 251 300 ENSBTAP00000014683/1-546 APDPQVPTGL PLVAYNPWMD LRQREDIQAL NLSVPYGPIP ADFQRKIRQS ENSTTRP00000010050/1-544 APDPQVPAGL PPVAYNPWMD IRQREDVQAL NLSVPYGPIP ADFQRKIRQS bmy_22216T0/1-516 APDPQVPAGL PPVAYNPWMD IRQREDVQAL NLSVPYGPIP ADFQRKIRQS BACU007781/1-551 APDPQVPAGL PPVAYNPWMD IRRREDVQAL NLSVPYGPIP ADFQRKIRQS 301 350 ENSBTAP00000014683/1-546 YFACVSYLDT QVGRLLSALD DLQLASSTIV AFTSDHGWAL GEHGEWAKYS ENSTTRP00000010050/1-544 YFACVSYXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXWAL GEHGEWAKYS bmy_22216T0/1-516 YFACVSYLDT QVGHLLSALD DLQLASSTIV ALTSDHGWAL GEHGEWAKYS BACU007781/1-551 YFACVSYLDT QVGHLLSALD DLQLASSTIV ALTSDHGWAL GEHGEWAKYS 351 400 ENSBTAP00000014683/1-546 NFDVTTRVPL MFYVPGRTAP LPVEGEKFFP YLDPFDSVSE VPEPGMEMQN ENSTTRP00000010050/1-544 NFDVTTRVPL LFYVPGRTAP LPAAGDRLFP YLDPFDSISE SVEPGRQAGD bmy_22216T0/1-516 NFDVTTRVPL VFYVPGRTAP LPAAGDKLFP YIDPFDSISE SVEPGRQAGX BACU007781/1-551 NFDVTTRVPL VFYVPGRTAP LPAAGDKLFP YLDPFDSISE SVEPGRQAGD 401 450 ENSBTAP00000014683/1-546 LLHALSSFMS LIGLSFLLRP RHCKDPK-RL ELWPRGRNLL KLFEDHGEEE ENSTTRP00000010050/1-544 LVELLSLFPT LAGLAGLPVP PRCPIPSFHV ELCREGRNLL KHFQVRDSEE bmy_22216T0/1-516 LVELLSLFPT LAGLAGLRVP PRCPIPSFHV ELCREGRNLL KHFQVRDSEE BACU007781/1-551 LVELLSLFPT LAGLAGLRVP PRCPIPSFHV ELCREGRNLL KHFQVRDSEE 451 500 ENSBTAP00000014683/1-546 EPHVRSNPRE LVAYSQYPRP ADSPQWNSDK PSLEDIKVMG YSIRTVDYRY ENSTTRP00000010050/1-544 DLYIRGNPRE LVAYSQYPRP ADSPQWNSDK PSLKDIKVMG YSIRTVDYRY bmy_22216T0/1-516 DPYIHGNPRE LVAYSQYPRP ADSPQWNSDK PSLKDIKVMG YSIRTVDYRY BACU007781/1-551 DPYIHGNPRE LVAYSQYPRP ADSPQWNSDK PSLKDIKVMG YSIRTVDYRY 501 550 ENSBTAP00000014683/1-546 TVWVGFNPQE FLANFSDIHA GELYFVASDP LQDHNVYNDS QGGTLPQSFM ENSTTRP00000010050/1-544 TVWVGFNPRE FLANFSDVHA GELYFVASDP WQDHNMYNDS QGGALPRSLT bmy_22216T0/1-516 TVWVGFNPRE FLANFSDVHA GELYFVASDP WQDHNMYNDS QGGALPRSLT BACU007781/1-551 TVWVGFNPRE FLANFSDVHA GELYFVASDP WQDHNMYNDS QGGALPRSLT 551 600 ENSBTAP00000014683/1-546 P ENSTTRP00000010050/1-544 P bmy_22216T0/1-516 P BACU007781/1-551 P