KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:28 2014 Check: 00 .. Name: ENSTTRP00000000617/1-306 Len: 380 Check: 8252 Weight: 1.00 Name: bmy_12614T0/1-363 Len: 380 Check: 915 Weight: 1.00 Name: BACU010666/1-311 Len: 380 Check: 5975 Weight: 1.00 Name: ENSP00000414904/1-321 Len: 380 Check: 6066 Weight: 1.00 Name: ENSBTAP00000014691/1-313 Len: 380 Check: 6632 Weight: 1.00 // 1 50 ENSTTRP00000000617/1-306 ---------- --LGFLSRGG G-GAHPRVP- -CFLSRRGRG PELTW----- bmy_12614T0/1-363 MELRR----- --LWLLCCCC G-CCPGAAP- -A--PPSGRN PPAAFRMTFH BACU010666/1-311 ---------- ---------- ---------- ---------- ---------- ENSP00000414904/1-321 MDVRALPWLP WLLWLLCRGG G-DADSRAPF TPTWPRSRER EAAAFR---- ENSBTAP00000014691/1-313 MELRR----- --LWLLCCCC CFYCWGSCA- -ALTPPFGRH PAAAFR---- 51 100 ENSTTRP00000000617/1-306 ---------- ---------E SLNRHRYLNS VFPGENSTAV YGINQFSYLF bmy_12614T0/1-363 RDLQEINQAL TFASESYLQE SLNRHRKLNS LFPGENSTAV YGINQFSYLF BACU010666/1-311 ---------- ---------E SLNRHRQLNS LFPGENSTAV YGINQFSYLF ENSP00000414904/1-321 ---------- ---------E SLNRHRYLNS LFPSENSTAF YGINQFSYLF ENSBTAP00000014691/1-313 ---------- ---------E SLNRQRYLNS LFPYENSTAV YGINQFSYLF 101 150 ENSTTRP00000000617/1-306 PEEFKAIYLR SRPSSFPQFL ADAHTSISNV SLPLRFDWRD KHVVTPVRNQ bmy_12614T0/1-363 PEEFKAIYLR SRPSSFPRFL AGVHTSISNL SLPLRFDWRD KHVVTPVRNQ BACU010666/1-311 PEEFKAIYLR SRPSGFPRFP AGTHTSISNL SLPLRFDWRD KHVVTPVRNQ ENSP00000414904/1-321 PEEFKAIYLR SKPSKFPRYS AEVHMSIPNV SLPLRFDWRD KQVVTQVRNQ ENSBTAP00000014691/1-313 PEEFKAIYLR SSPSRFPRFP AEEYTSISNL SLPLRFDWRD KHVVTQVRNQ 151 200 ENSTTRP00000000617/1-306 QTCGGCWAFT VVGAVESACA IKGQPLEALS VQQVIDCSYS NYGCNGGSPL bmy_12614T0/1-363 QTCGGCWAFT VVGAVESACA IKGQPLEALS VQQVLDCSYS NYGCNGGSPL BACU010666/1-311 QTCGGCWAFT VVGAVESACA IEGQPLEALS VQQVLDCSYS NYGCNGGSPL ENSP00000414904/1-321 QMCGGCWAFS VVGAVESAYA IKGKPLEDLS VQQVIDCSYN NYGCNGGSTL ENSBTAP00000014691/1-313 KTCGGCWAFS VVGAVESVCA IKGQPLEVLS VQQVIDCSYS NYGCNGGSPL 201 250 ENSTTRP00000000617/1-306 NALNWLNKMQ VKLVRDSEYP FKAQNGLCRY FSDSHSGFSI KGYSAYDFRX bmy_12614T0/1-363 NALNWLSKMQ VKLVRDSEYP FKAQNGLCRY FSDSHSGFSI KGYSAYDFRD BACU010666/1-311 NALNWLSKMQ VKLVRDSEYP FKAQNGLCRY FSDSHFGFSI KGYSAYDFRD ENSP00000414904/1-321 NALNWLNKMQ VKLVKDSEYP FKAQNGLCHY FSGSHSGFSI KGYSAYDFSD ENSBTAP00000014691/1-313 SALYWLNKLQ VKLVRDSEYP FQAQNGLCRY FSDSHSGSSI KGYSAYDFSG 251 300 ENSTTRP00000000617/1-306 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_12614T0/1-363 HEDEMAKALF TLGPLIVVVD AVSWQDYLGG IIQHHCSSGE ANHAVLVTGF BACU010666/1-311 HEDEMAKALL TLGPLIVVVD AVSWQDYLGG IIQHHCSSGE ANHAVLVTGF ENSP00000414904/1-321 QEDEMAKALL TFGPLVVIVD AVSWQDYLGG IIQHHCSSGE ANHAVLITGF ENSBTAP00000014691/1-313 QEDKMAEALL ALGPLIVVVD AMSWQDYLGG IIQHHCSSGE ANHAVLVTGF 301 350 ENSTTRP00000000617/1-306 XXX------- ---------- --------XS TPYWIVRNSW GTSWGIDGCV bmy_12614T0/1-363 DKT-----ER KHPSQASAFS FTGALQIKGR CHSWKPCCPH SLSPAAERGA BACU010666/1-311 DKTEALQPER EHPGQASAFS FAGALQIKGR CPSWKPCCPP SLSPAAERGA ENSP00000414904/1-321 DKT------- ---------- --------GS TPYWIVRNSW GSSWGVDGYA ENSBTAP00000014691/1-313 DKT------- ---------- --------GS IPYWIVRNSW GTSWGIDGYV 351 400 ENSTTRP00000000617/1-306 HVKMGGNIC- ----GIAESV SAVFV----- bmy_12614T0/1-363 CIWAEGRLLS QPWQGCCEDV IRMLVQHHLD BACU010666/1-311 CIWAEGRLLS QPWRGCREDE SRMLVQPHPG ENSP00000414904/1-321 HVKMGSNVC- ----GIADSV SSIFV----- ENSBTAP00000014691/1-313 RVKMGGNVC- ----GIADSV SAVFV-----