KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:28 2014 Check: 00 .. Name: ENSP00000310547/1-580 Len: 643 Check: 4911 Weight: 1.00 Name: ENSBTAP00000014692/1-580 Len: 643 Check: 4563 Weight: 1.00 Name: bmy_07564T0/1-483 Len: 643 Check: 5256 Weight: 1.00 Name: BACU018547/1-575 Len: 643 Check: 5675 Weight: 1.00 Name: ENSTTRP00000001817/1-580 Len: 643 Check: 4723 Weight: 1.00 // 1 50 ENSP00000310547/1-580 MWRP------ ----VQLCHF HSALLHRRQK PWPSPAVFFR RNVRGLPPR- ENSBTAP00000014692/1-580 MWRP------ ----AQLCHF HSALLQGRPK PWPSPATFFR RNLAAPPAR- bmy_07564T0/1-483 MFPPPTPYPL LTSQSQLCRF HLALLQGRPK PWPSPTAFFR RNLGAPPAR- BACU018547/1-575 ---------- -----QLCRF HLALLQGRPK PWPSPTAFFR RNLGAPPARW ENSTTRP00000001817/1-580 MWRS------ ----SQLCHF HSALLQGRLK PWPSPTAFFR RNLGAPPAR- 51 100 ENSP00000310547/1-580 FSSPTPLWRK VLSTAVVGAP LLLGARYVMA EAREKRRMRL VVDGMGRFGR ENSBTAP00000014692/1-580 PLRPQPLWRK ALSAAALGAP LLLGVRYLTA GAQERRRMRL VVDGIGRFSR bmy_07564T0/1-483 PSRPQPLWKK ALSATVLGVP LLLGARYLTA EPQERRRMRL VGDGIGRFSS BACU018547/1-575 PSRPQPLWKK ALSATVLGVP LLFGARYLTA EPQERRRMRL VVDGVGRFSR ENSTTRP00000001817/1-580 PSRPQPLWKK ALSATVLGVP LLLGARYLMA EPQERRRMRL MVDGIGRFSR 101 150 ENSP00000310547/1-580 ---------- -SLKV----- ---------- ---------- ---------- ENSBTAP00000014692/1-580 ---------- -SLRV----- ---------- ---------- ---------- bmy_07564T0/1-483 LDGDVLLRGL LSLSVFEGRP ADLPGLLVVH KCRPARGGGG LFLRPSLAGP BACU018547/1-575 ---------- -SLRV----- ---------- ---------- ---------- ENSTTRP00000001817/1-580 ---------- -SLRV----- ---------- ---------- ---------- 151 200 ENSP00000310547/1-580 GLQ---ISLD YWWCTNVVLR GV---EENSP GYLEVMSACH QRAADALVAG ENSBTAP00000014692/1-580 GLQ---ISLD YWWCTNVILR GV---EENSP RYLEVMSACH QRAADALVAG bmy_07564T0/1-483 GLRPAGMGVP RWRCPPAPIP SLYTCGQNSP GYLEVMSACH QRAADALVAG BACU018547/1-575 GLQ---ISLD YWWCTNVVLR GV---EENSP GYLEVMSACH QRAADALVAG ENSTTRP00000001817/1-580 GLQ---ISLD YWWCTNVVLR GV---EENSP GYLEVMSACH QRAADALVAG 201 250 ENSP00000310547/1-580 AISNGGLYVK LGQGLCSFNH LLPPEYTRTL RVLEDRALKR GFQEVDELFL ENSBTAP00000014692/1-580 AISNGGLYVK LGQGLCSFNH LLPPEYIRTL RVLEDRALTR GFREVDELFL bmy_07564T0/1-483 AISNGGLYVK LGQGLCSFNH LLPPEYIKTL RV-------- SSCQVDELFL BACU018547/1-575 AISNGGLYVK LGQGLCSFNH LLPPEYIKTL RVLEDRALTQ GFREVDELFL ENSTTRP00000001817/1-580 AISNGGLYVK LGQGLCSFNH LLPPEYIKTL RVLEDRALTR GFREVDELFL 251 300 ENSP00000310547/1-580 EDFQALPHEL FQEFDYQPIA AASLAQVHRA KLHDGTSVAV KVQYIDLRDR ENSBTAP00000014692/1-580 EDFQAPPHEL FQEFDYQPIA AASLAQVHRA RLHDGTVVAV KVQYIDLRDR bmy_07564T0/1-483 EDFRAPPHEL FQEFDYQPIA AASLAQVHRA RLHDGTVVAV KVQYIDLRDR BACU018547/1-575 EDFRALPHEL FQEFDYQPIA AASLAQVHRA RLHDGTVVAV KVQYIDLRDR ENSTTRP00000001817/1-580 EDFRAPPHEL FQEFDYQPIA AASLAQVHRA RLHDGTVVAV KVQYIDLRDR 301 350 ENSP00000310547/1-580 FDGDIHTLEL LLRLVEVMHP SFGFSWVLQD LKGTLAQELD FENEGRNAER ENSBTAP00000014692/1-580 FDGDIHTLEL LLHLVELMHP SFGFSWVLQD LKGTLAQELD FENEGRNAER bmy_07564T0/1-483 FEGDIYTLEL LLQLVELMHP SFGFSWVLQD LKGTLAQELD FENEGRNAER BACU018547/1-575 FEGDIYTLEL LLQLVELMHP SFGFSWVLQD LKGTLAQELD FENEGRNAER ENSTTRP00000001817/1-580 FDGDIHTLEL LLRLVELMHP SFGFSWVLQD LKGTLAQELD FENEGRNAER 351 400 ENSP00000310547/1-580 CARELAHFPY VVVPRVHWDK SSKRVLTADF CAGCKVNDVE AIRSQGLAVH ENSBTAP00000014692/1-580 CARELQHFRH VVVPRVHWGT SSKRVLTAEF YEGCKVNDVE AIQSMGLAVQ bmy_07564T0/1-483 CARELQHFRY VVVPRVHWDV SSKRVLTAEF CEGCKVNDVE AIKTMGLAVR BACU018547/1-575 CARELQHFRY VVVPRVHWDV SSKRVLTAEF CEGCKVNDVE AIKTMGLAVR ENSTTRP00000001817/1-580 CARELQHFHY VVMPRVHWDV SGKRVLTAEF CEGCKVNDVE AIKTMGLAVR 401 450 ENSP00000310547/1-580 DIAEKLIKAF AEQIFYTGFI HSDPHPGNVL VRKGPDGKAE LVLLDHGLYQ ENSBTAP00000014692/1-580 DIAEKLIKAF AEQIFYTGFI HSDPHPGNVL VRKGPDGKAQ LVLLDHGLYQ bmy_07564T0/1-483 DIAEKLIKAF AEQIFYTGFV HSDPHPGNVL VRKGPDGKGQ LVLLDHGLYQ BACU018547/1-575 DIAEKLIKAF AEQIFYTGFV HSDPHPGNVL VRKGPDGKGQ LVLLDHGLYQ ENSTTRP00000001817/1-580 DVAEKLIQAF AEQIFYTGFV HSDPHPGNVL VRKGPDGKGQ LVLLDHGLYQ 451 500 ENSP00000310547/1-580 FLEEKDRAAL CQLWRAIILR DDAAMRAHAA ALGVQDYLLF AEMLMQRPVR ENSBTAP00000014692/1-580 FLDEKDRLAL CQLWRAIILR DEAAMKAHAA ELGVQDYLLF SEVLMQRPVR bmy_07564T0/1-483 FLDEKDRSAL CQLWRAIILR DEAAMKAHAA ELGVQG---- ---------- BACU018547/1-575 FLDEKDRSAL CQLWRAIILR DEAAMKAHAA ALGVQDYFLF SEVLMQRPVR ENSTTRP00000001817/1-580 FLDEKDRSAL CQLWRAVILR DEAAMKAHAA ELGVQDYFLF SEVLMQRPVR 501 550 ENSP00000310547/1-580 LGQLWGSHLL SREEAAYMVD MARERFEAVM AVLRELPRPM LLVLRNINTV ENSBTAP00000014692/1-580 LGQLWRSRLL SREEAAYMQD MAREHFEEVM AVLKALPRSM LLVLRNVNTV bmy_07564T0/1-483 ---------- ---EAG---- ---------- ---------- ---------- BACU018547/1-575 LRQLWHSRLL SREEAAYMQD MAREHFEEVM AVLKALPRPM LLVLRNLNTV ENSTTRP00000001817/1-580 LGQLWGSHLL SREEAAYMQD MAREHFEEVM AVLKALPRSM LLVLRNLNTV 551 600 ENSP00000310547/1-580 RAINVALGAP VDRYFLMAKR AVRGWSRLAG ATYRGVYGTS LLRHAKVVWE ENSBTAP00000014692/1-580 RSINNALGAP VDRYFLMAKS AVRGWSRLAG AMYQSIYGAS ILRHIRVIWE bmy_07564T0/1-483 ---------- ---------- ---------- ---------- -------VWV BACU018547/1-575 RAINTALGAP VDRYFLMAKS AVRGWSRLAG ATCQNVYGAS LLRHIRVIWE ENSTTRP00000001817/1-580 RAINTALGAP VDRYFLMAKS AVRAWSRLAG ATSQNTYGAS LLRHIRVIWE 601 650 ENSP00000310547/1-580 MLKFEVALRL ETLAMRLTAL LARALVHLSL VPPAEELYQY LET ENSBTAP00000014692/1-580 TFKFEVALRL ETLSMRLTAL LVRVLVYLGI MPDTKGLSKY LET bmy_07564T0/1-483 ---------- ---------- ---------- ---------- --- BACU018547/1-575 SFKFEVALRL ETLSMRITAL LVRVLVHLGL VPKTKGLYEF LE- ENSTTRP00000001817/1-580 SFKFEVALRL ETLSMRITAL LVRVLVHLGL IPKTKGLYEY LEI