KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:30 2014 Check: 00 .. Name: ENSP00000380594/1-507 Len: 634 Check: 7398 Weight: 1.00 Name: ENSBTAP00000014700/1-508 Len: 634 Check: 6138 Weight: 1.00 Name: ENSTTRP00000006074/1-466 Len: 634 Check: 6885 Weight: 1.00 Name: bmy_06954T0/1-355 Len: 634 Check: 8099 Weight: 1.00 Name: BACU000894/1-628 Len: 634 Check: 5226 Weight: 1.00 // 1 50 ENSP00000380594/1-507 MCTK--TIPV LWGCFLLWNL YVSSSQTIYP GIKARITQRA LDYGVQAGMK ENSBTAP00000014700/1-508 MCTKMAQVQV LWGCFLLWNL YISSAQAIYP GIKARATQRA LDYAVQAGME ENSTTRP00000006074/1-466 ---------- ---------- ---------- ---------- ----IQAGVE bmy_06954T0/1-355 ---------- ---------- ---------- ---------- --------ME BACU000894/1-628 ------MVQV LWGCFLLWNL YISSAQTIYP GIKARATQRA LDYGIQAGME 51 100 ENSP00000380594/1-507 MIEQMLKEKK LPDLSGSESL EFLKVDYVNY NFSNIKISAF SFPNTSLAFV ENSBTAP00000014700/1-508 MIEQMAKERK LPDLKGSESL EFVKIDYVNY NFTNIKINAF SFPNTSLSFV ENSTTRP00000006074/1-466 MIEQMVKERK IPDLKGSESP KFLKIDYMNY KLINIKINAF SLPNTSLAFV bmy_06954T0/1-355 MIEQMVKKRN IPDLKGSESL EFLKIDYVNY NFKNIKINDF SLPNTSLAFV BACU000894/1-628 MIEQMVKKRN IPDLKGSESL EFLKIDYVNY NFKNIKINAF SLPNTSLAFV 101 150 ENSP00000380594/1-507 PGVGIKALTN HGTANISTDW GFESPLFQDT GGADLFLSGV YFTGIIILTR ENSBTAP00000014700/1-508 PGVGIKALTN HGTTNISTDW EVKSPLFQDT GAADLFLSGV YFTGIVVLSR ENSTTRP00000006074/1-466 PGVGIRALIK HGTANISTDW EIKSPLFQDT GGANLLLSGV YFTGILVLAR bmy_06954T0/1-355 PGVGIRVLIN HGTANISTDW EIKSPLFQDR GGADLFLSGV YFTGIVVLAW BACU000894/1-628 PGVGIRALIN HGTANISTDW EIKSPLFQDT GGADLFLSGV YFTGIVVLAW 151 200 ENSP00000380594/1-507 NDFGHPTLKL QDCYAQLSHA HVSFSGELSV LYNSFAEPME KPILKNLNEM ENSBTAP00000014700/1-508 NDFGHPILKL QDCYAQVSHA DVSFSGELSV LYNSFAEPME KPILKKLNEM ENSTTRP00000006074/1-466 NDFGHPILKL QDCNAQVSRN DISFSGELSV LYNSFAEPME KPILKNLNKM bmy_06954T0/1-355 NDSGHPILKL QNCCAQVSHS DVSFSGELSV LYNSFAEPME KPILKNLNKM BACU000894/1-628 NDFGHPILKL QNCCAQVSHS DVSFSGELSV LYNSFAEPME KRILKNLNKM 201 250 ENSP00000380594/1-507 LCPIIASEVK ALNANLSTLE VLTKIDNYTL LDYSLISSPE ITENYLDLNL ENSBTAP00000014700/1-508 LCPIITGEVE ALNANLSMLE VLRKIDNYTL LDYSLISSPE ITENYFDLNL ENSTTRP00000006074/1-466 LCPIITSEVE ALNANLSMLE VLRSVDNYTL LDYSLISSPE ITENYIDLNL bmy_06954T0/1-355 LCPIITSEVE ALNANLSMLK ALRKIDNYTL LDYSLISSPE ITENYVDLNL BACU000894/1-628 LCPIITSEVE ALNANFSMLK ALRKIDNYTL LDYSLISSPE ITENYVDLNL 251 300 ENSP00000380594/1-507 KGVFYPLENL TDPPFSPVPF VLPERSNSML YIGIAEYFFK SASFAHFTAG ENSBTAP00000014700/1-508 KGVFYPLKSL RYPPFPSVPF VLPERRDSML YIGISEYFFK SASYAYFTAG ENSTTRP00000006074/1-466 KGVFYPLENL TDPPFSSVPF VLPEHNDSMI YIGISEYFFK SASYAYFTAG bmy_06954T0/1-355 KGVFHPLENL TDPPFSSVPF VLPEHSDSMM YIGISEYFFK SASYAYFTAG BACU000894/1-628 KGVFYPLENL TDTPFSSVPF VLPEHSDSMI YIGISEYFFK SASYAYFTAG 301 350 ENSP00000380594/1-507 VFNVTLSTEE ISNHFVQNSQ GLGNVLSRIA EIYILSQPFM VRIMATEPPI ENSBTAP00000014700/1-508 AFSFTLTTKE ISNHLLHNSQ AHGNMLSRIA ELYILSKPFM VQVMATEPPV ENSTTRP00000006074/1-466 AFNVTLTTKK IFNHLIRNSQ GLGNMLSWIA ELYILSQPFM VQVLAREPPV bmy_06954T0/1-355 AFNVTLTTKE IFNHLIRNSQ GLGSMLSRIA ELYILSQPFM VKVLATEPPV BACU000894/1-628 AFNVTLTTKE IFNHLIRNSQ GLGSMLSRIA ELYILSQPFM VKVLATEPPV 351 400 ENSP00000380594/1-507 INLQPGNFTL DIPASIMMLT QPKNSTVETI VSMDFVASTS VGLVILGQRL ENSBTAP00000014700/1-508 ISLLPGNFTL DIPASIMILT QPENSTAETI VSMDFVASTN VALAILGQRL ENSTTRP00000006074/1-466 VNLLPGHFTL DIPASFVILT QSKNSTAETV LSMDFVASTN VALAILGQRL bmy_06954T0/1-355 VNLLPGNFTL DVPASFVIFT QSKNSTAETI VSMDFV---- ---SLRGQ-- BACU000894/1-628 VNLLPGNFTL DIPASFVIFT QSKNSTAKTI VSMDFVASTN VALAILGQRL 401 450 ENSP00000380594/1-507 VCSLSLNR-- --FRLALPES ---NRSNIEV LRFENILS-- ---------- ENSBTAP00000014700/1-508 ICSLSLNR-- --FRLSLPES ---NRGNIEV LRFENILS-- ---------- ENSTTRP00000006074/1-466 ICSLSLNR-- --FRLSLPES ---IRSNIEV FRFENILS-- ---------- bmy_06954T0/1-355 ---------- ---------- ---------- -------E-- ---------- BACU000894/1-628 ICSLSLKRGF AGEKTAFVKS GWLLRQSTVL KRWKNWFDQW SDGHLTYYDD 451 500 ENSP00000380594/1-507 ----SILHFG VLPLANAKLQ QG-------- ---------- ---------- ENSBTAP00000014700/1-508 ----SILHFG VLPLANAKLQ QG-------- ---------- ---------- ENSTTRP00000006074/1-466 ----SILHFG VLPLANAKLQ QG-------- ---------- ---------- bmy_06954T0/1-355 ----GSLR-- -IPV------ ---------- ---------- ---------- BACU000894/1-628 QTRQSVEDKV HMPVDCINIR MGHECQDIQP PDGKAKDCCR LFAEMGKTIS 501 550 ENSP00000380594/1-507 ---------- ---FPLSNPH KFLFVNSDIE VLEGFLLIST DLKYETSSKQ ENSBTAP00000014700/1-508 ---------- ---FPLPNPH KISLVNSDIE VLEGFLLIST DLKYKTS-KQ ENSTTRP00000006074/1-466 ---------- ---FPLPNPH KISLVNSDIE VLEGFLLIST DLKYKTSLKQ bmy_06954T0/1-355 ---------- ---LFLQ--- ---------- ---------- ---------- BACU000894/1-628 LCAESTDDCL AWKFTLQDPR TNTAYVGSEV LYDEIAVASS PPPYTAYAAP 551 600 ENSP00000380594/1-507 QP-------- ---------- ---------- ---------S FHVWEGLN-- ENSBTAP00000014700/1-508 QP-------- ---------- ---------- ---------G FHGWEDLH-- ENSTTRP00000006074/1-466 QS-------- ---------- ---------- ---------S FHGWEALN-- bmy_06954T0/1-355 ---------- ---------- ---------- ---------- ---------- BACU000894/1-628 APEQACGCGP YSGAHPPGTQ VVYAANGQAY AVPYQYPCAG RYGQQPTNQG 601 650 ENSP00000380594/1-507 LISRQWRGKS AP-------- ---------- ---- ENSBTAP00000014700/1-508 LISGQWSGKP TP-------- ---------- ---- ENSTTRP00000006074/1-466 LIRGRWRGKP APW------- ---------- ---- bmy_06954T0/1-355 ---------- ---------- ---------- ---- BACU000894/1-628 IIRERYRDSD SDLALGMLAA AATGMALGSL FWVF