KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:31 2014 Check: 00 .. Name: ENSTTRP00000006128/1-330 Len: 336 Check: 8466 Weight: 1.00 Name: ENSBTAP00000014710/1-335 Len: 336 Check: 8702 Weight: 1.00 Name: ENSP00000359215/1-330 Len: 336 Check: 8775 Weight: 1.00 Name: bmy_17589T0/1-329 Len: 336 Check: 5011 Weight: 1.00 Name: BACU012387/1-154 Len: 336 Check: 8459 Weight: 1.00 // 1 50 ENSTTRP00000006128/1-330 MEHLGPHHLH PGHAEPISFG IDQILNSPDQ GSCMGPSSRL QDGEYGLGCL ENSBTAP00000014710/1-335 MEHLGPHHLH PGHAEPISFG IDQILNSPDQ GGCMGPSSRL QDGEYGLGCL ENSP00000359215/1-330 MEHLGPHHLH PGHAEPISFG IDQILNSPDQ GGCMGPASRL QDGEYGLGCL bmy_17589T0/1-329 MEHLGPHHLH PGHAEPISFG IDQILNSPDQ GSCMGPSSRL QDGEYGLGCL BACU012387/1-154 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000006128/1-330 VGGAYPYGGG GPAAGAGAGG AGAYGAGGPS GPGGPAGGGG GGACSMGPLA ENSBTAP00000014710/1-335 VGGAYPYGGG GPAAGPGAGG AGAYGAGGPS GPGGPA-GGG GGACSMGPLA ENSP00000359215/1-330 VGGAYTYGGG GSAAATGAGG AGAYGTGGPG GPGGPA--GG GGACSMGPLT bmy_17589T0/1-329 VGGAYPYGGG GPATGAGAGG AGAYGAGGPS GPGGPAGGGG GGACSMGPLA BACU012387/1-154 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000006128/1-330 GSYNVNMALA GGPGPAGGGG GGG-----AG ALSAAGVIRV PAHRPLAGAV ENSBTAP00000014710/1-335 GSYNVNMALA GGPGPGGGGG GGGGGGGGGG TLSAAGVIRV PAHRPLTGAV ENSP00000359215/1-330 GSYNVNMALA GGPGPGGGGG SSGG----AG ALSAAGVIRV PAHRPLAGAV bmy_17589T0/1-329 GSYNVNMALA GGPGPGGGGG GGG------- ALSAAGVIRV PAHRPLAGAV BACU012387/1-154 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000006128/1-330 AHPQPLATGL PTVPSVPAVP GVNNLTGLTF FWMESNRRYT KDRFTGHPYQ ENSBTAP00000014710/1-335 AHPQPLATGL PTVPSVPAVP GVNNLTGLTF PWMESNRRYT KDRFTGHPYQ ENSP00000359215/1-330 AHPQPLATGL PTVPSVPAMP GVNNLTGLTF PWMESNRRYT KDRFTGHPYQ bmy_17589T0/1-329 AHPQPLATGL PTVPSVPAVP GVNNLTGLTF PWMESNRRYT KDRFTGHPYQ BACU012387/1-154 ---------- ---------- ---------- --MESNRRYT KDRFTGHPYQ 201 250 ENSTTRP00000006128/1-330 NRTPPKKKKP RTSFTRLQIC ELEKRFHRQK YLASAERAAL AKALKMTDAQ ENSBTAP00000014710/1-335 NRTPPKKKKP RTSFTRLQIC ELEKRFHRQK YLASAERAAL AKALKMTDAQ ENSP00000359215/1-330 NRTPPKKKKP RTSFTRLQIC ELEKRFHRQK YLASAERAAL AKALKMTDAQ bmy_17589T0/1-329 NRTPPKKKKP RTSFTRLQIC ELEKRFHRQK YLASAERAAL AKALKMTDAQ BACU012387/1-154 NRTPPKKKKP RTSFTRLQIC ELEKRFHRQK YLASAERAAL AKALKMTDAQ 251 300 ENSTTRP00000006128/1-330 VKTWFQNRRT KWRRQTAEER EAERQQANRI -LQLQQEAFQ KSLAQPLPAD ENSBTAP00000014710/1-335 VKTWFQNRRT KWRRQTAEER EAERQQANRI LLQLQQEAFQ KSLAQPLPAD ENSP00000359215/1-330 VKTWFQNRRT KWRRQTAEER EAERQQANRI LLQLQQEAFQ KSLAQPLPAD bmy_17589T0/1-329 VKTWFQNRRT KWRRQTAEER EAERQQANRI LLQLQQEAFQ KSLAQPLPAD BACU012387/1-154 VKTWFQNRRT KWRRQTAEER EAERQQANRI LLQLQQEAFQ KSLAQPLPAD 301 350 ENSTTRP00000006128/1-330 PLCVHNSSLF ALQNLQPWSD DSTKITSVTS VASACE ENSBTAP00000014710/1-335 PLCVHNSSLF ALQNLQPWSD DSTKITSVTS VASACE ENSP00000359215/1-330 PLCVHNSSLF ALQNLQPWSD DSTKITSVTS VASACE bmy_17589T0/1-329 PLCVHNSSLF ALQNLQPWSD DSTKITSVTS VASACE BACU012387/1-154 PLCVHNSSLF ALQNLQPWSD DSTKITSVTS VASACE