KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:31 2014 Check: 00 .. Name: ENSTTRP00000011396/1-574 Len: 601 Check: 8057 Weight: 1.00 Name: ENSP00000401878/1-601 Len: 601 Check: 9695 Weight: 1.00 Name: ENSBTAP00000014711/1-601 Len: 601 Check: 1482 Weight: 1.00 Name: bmy_20396T0/1-601 Len: 601 Check: 2821 Weight: 1.00 Name: BACU019894/1-575 Len: 601 Check: 2230 Weight: 1.00 // 1 50 ENSTTRP00000011396/1-574 ---------- ---------- ------MDPF HACSILKQLK TMYDEGQLTD ENSP00000401878/1-601 MAASADLSKS SPTPNGIPSS DPASDAMDPF HACSILKQLK TMYDEGQLTD ENSBTAP00000014711/1-601 MAASADLSKS SPTPNGIPSS DTASDAMDPF HACSILKQLK TMYDEGQLTD bmy_20396T0/1-601 MAASADLSKS SPTPNGIXSS DTANDAMDPF HACSILKQLK TMYDEGQLTD BACU019894/1-575 ---------- ---------- ------MDPF HACSILKQLK TMYDEGQLTD 51 100 ENSTTRP00000011396/1-574 IVVEVDHGKT FSCHRNVLAA ISPYFRSMFT SGLTESTQKE VRIVGVEAES ENSP00000401878/1-601 IVVEVDHGKT FSCHRNVLAA ISPYFRSMFT SGLTESTQKE VRIVGVEAES ENSBTAP00000014711/1-601 IVVEVDHGKT FSCHRNVLAA ISPYFRSMFT SGLTESTQKE VRIVGVEAES bmy_20396T0/1-601 IVVEVDHGKT FSCHRNVLAA ISPYFRSMFT SGLTESTQKE VRIVGVEAES BACU019894/1-575 IVVEVDHGKT FSCHRNVLAA ISPYFRSMFT SGLTESTQKE VRIVGVEAES 101 150 ENSTTRP00000011396/1-574 MDLVLNYAYT SRVVLTEANV QALFTAASIF QIPSIQDQCA KYMISHLDPQ ENSP00000401878/1-601 MDLVLNYAYT SRVILTEANV QALFTAASIF QIPSIQDQCA KYMISHLDPQ ENSBTAP00000014711/1-601 MDLVLNYAYT SRVVLTEANV QALFTAASIF QIPSIQDQCA KYMISHLDPQ bmy_20396T0/1-601 MDLVLNYAYT SRVVLTEANV QALFTAASIF QIPSIQDQCA KYMISHLDPQ BACU019894/1-575 MDLVLNYAYT SRVVLTEANV QALFTAASIF QIPSIQDQCA KYMISHLDPQ 151 200 ENSTTRP00000011396/1-574 NSIGVFIFAD HYGHQELGDR SKEYIRKKFL CVTKEQEFLQ LTKDQLISIL ENSP00000401878/1-601 NSIGVFIFAD HYGHQELGDR SKEYIRKKFL CVTKEQEFLQ LTKDQLISIL ENSBTAP00000014711/1-601 NSIGVFIFAD HYGHQELGDR SKEYIRKKFL CVTKEQEFLQ LTKDQLISIL bmy_20396T0/1-601 NSIGVFIFAD HYGHQELGDR SKEYIRKKFL CVTKEQEFLQ LTKEQLISIL BACU019894/1-575 NSIGVFIFAD HYGHQELGDR SKEYIRKKFL CVTKEQEFLQ LTKDQLISIL 201 250 ENSTTRP00000011396/1-574 DSDDLNVDRE EHVYESIVRW FEHEQNEREV HLPEIFAKCI RFPLMEDTFI ENSP00000401878/1-601 DSDDLNVDRE EHVYESIIRW FEHEQNEREV HLPEIFAKCI RFPLMEDTFI ENSBTAP00000014711/1-601 DSDDLNVDRE EHVYESIVRW FEHEQNEREV HLPEIFAKCI RFPLMEDTFI bmy_20396T0/1-601 DSDDLNVDRE EHVYESIVRW FEHEQNEREV HLPEIFAKCI RFPLMEDTFI BACU019894/1-575 DSDDLNVDRE EHVYESIVRW FEHEQNEREV HLPEIFAKCI RFPLMEDTFL 251 300 ENSTTRP00000011396/1-574 EKIPPQFAQA IAKSYVEKGP SSTNGCTQRL GMTASEMIIC FDAAHKHSGK ENSP00000401878/1-601 EKIPPQFAQA IAKSCVEKGP SNTNGCTQRL GMTASEMIIC FDAAHKHSGK ENSBTAP00000014711/1-601 EKIPPQFAQA IAKSCVEKGP ASPNGCTQRL GMTASEMIIC FDAAHKHSGK bmy_20396T0/1-601 EKIPPQFAQA IAKSYVEKGP SSTNGCTQRL GMTASEMIIC FDAAHKHSGK BACU019894/1-575 EKIPPQFAQA IAKSYVEKGP SSTNGCTQRL GMTASEMIIC FDAAHKHSGK 301 350 ENSTTRP00000011396/1-574 KQTVPCLDIF TGRVFKLCKP PNDLREVGIL VSPDNDIYIA GGYRPSSSEV ENSP00000401878/1-601 KQTVPCLDIV TGRVFKLCKP PNDLREVGIL VSPDNDIYIA GGYRPSSSEV ENSBTAP00000014711/1-601 KQTVPCLDIF TGRVFKLCKP PNDLREVGIL VSPDNDIYIA GGYRPSSSEV bmy_20396T0/1-601 KQTVPCLDIF TGRVFKLCKP PNDLREVGIL VSPDNDIYIA GGYRPSSSEV BACU019894/1-575 KQTVPCLDIF TGRVFKLCKP PNDLREVGIL VSPDNDIYIA GGYRPSSSEV 351 400 ENSTTRP00000011396/1-574 SIDHKAENDF WMYDHSTNRW LSKPSLLRAR ICCKLVYCCG KMYAI-GRVY ENSP00000401878/1-601 SIDHKAENDF WMYDHSTNRW LSKPSLLRAR IGCKLVYCCG KMYAIGGRVY ENSBTAP00000014711/1-601 SIDHKAENDF WMYDHSTNRW LSKPSLLRAR IGCKLVYCCG KMYAIGGRVY bmy_20396T0/1-601 SIDHKAENDF WMYDHSTNRW LSKPSLLRAR IGCKLVYCCG KMYAIGGRVY BACU019894/1-575 SIDHKAENDF WMYDHSTNRW LSKPSLLRAR IGCKLVYCCG KMYAIGGRVY 401 450 ENSTTRP00000011396/1-574 DGDGRNSLKS VECYDSREXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXEF ENSP00000401878/1-601 EGDGRNSLKS VECYDSRENC WTTVCAMPVA MEFHNAVEYK EKIYVLQGEF ENSBTAP00000014711/1-601 EGDGRNSLKS VECYDSRENR WTTVCAMPVA MEFHNAVEYK EKIYVLQGEF bmy_20396T0/1-601 EGDGRNSLKS VECYDSRENC WMTVCAMPVA MEFHNAVEYK EKIYVLQGEF BACU019894/1-575 EGDGRNSLKS VECYDSRENC WMTVCAMPVA MEFHNAVEYK EKIYVLQGEF 451 500 ENSTTRP00000011396/1-574 FLFYEPQKDY WGFLTPMTVP RIQGLAAVYK NSIYYIAGTC GNHQRMFTVE ENSP00000401878/1-601 FLFYEPQKDY WGFLTPMTVP RIQGLAAVYK DSIYYIAGTC GNHQRMFTVE ENSBTAP00000014711/1-601 FLFYEPQKDY WGFLTPMTVP RIQGLAAVYK NSIYYIAGTC GNHQRMFTVE bmy_20396T0/1-601 FLFYEPQKDY WGFLTPMTVP RIQGLAAVYK NSIYYIAGTC GNHQRMFTVE BACU019894/1-575 FLFYEPQKDY WGFLTPMTVP RIQGLAAVYK NSIYYIAGTC GNHQRMFTVE 501 550 ENSTTRP00000011396/1-574 AYDIELNKWT RKKDFPCDES INPYLKLVLF QNKLHLFVRA TQVTVEEHVF ENSP00000401878/1-601 AYDIELNKWT RKKDFPCDQS INPYLKLVLF QNKLHLFVRA TQVTVEEHVF ENSBTAP00000014711/1-601 AYDIELNKWT RKKDFPCDES INPYLKLVLF QNKLHLFVRA TQVTVEEHVF bmy_20396T0/1-601 AYDIELNKWT RKKDFPCDES INPYLKLVLF QNKLHLFVRA TQVTVEEHVF BACU019894/1-575 AYDIELNKWT RKKDFPCDES INPYLKLVLF QNKLHLFVRA TQVTVEEHVF 551 600 ENSTTRP00000011396/1-574 RTSRKNSLYQ YDDITDQWMK VYETPDRLWD LGRHFECAVA KLYPQCLQKV ENSP00000401878/1-601 RTSRKNSLYQ YDDIADQWMK VYETPDRLWD LGRHFECAVA KLYPQCLQKV ENSBTAP00000014711/1-601 RTSRKNSLYQ YDDITDQWMK VYETPDRLWD LGRHFECAVA KLYPQCLQKV bmy_20396T0/1-601 RTSRKNSLYQ YDDITDQWMK VYETPDRLWD LGRHFECAVA KLYPQCLQKV BACU019894/1-575 RTSRKNSLYQ YDDITDQWMK VYETPDRLWD LGRHFECAVA KLYPQCLQKV 601 650 ENSTTRP00000011396/1-574 L ENSP00000401878/1-601 L ENSBTAP00000014711/1-601 L bmy_20396T0/1-601 L BACU019894/1-575 L