KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:34 2014 Check: 00 .. Name: ENSP00000398063/1-620 Len: 743 Check: 4038 Weight: 1.00 Name: ENSBTAP00000014720/1-620 Len: 743 Check: 260 Weight: 1.00 Name: bmy_19603T0/1-697 Len: 743 Check: 6885 Weight: 1.00 Name: BACU009996/1-628 Len: 743 Check: 6057 Weight: 1.00 Name: ENSTTRP00000000743/1-621 Len: 743 Check: 3442 Weight: 1.00 // 1 50 ENSP00000398063/1-620 -MATKEKLQC LKDFHKDILK PSPGKSPGTR PEDEAEGKPP QREKWSSKID ENSBTAP00000014720/1-620 -MATKEKLQC LKDFHKDILK PSPGKSPGTR PEDEAEGKPP QREKWASRID bmy_19603T0/1-697 -MATKEKLQC LKDFHKDILK PSPGKSPGTR PEDEAEGKPP QREKWASKID BACU009996/1-628 -MATKEKLQC LKDFHKDILK PSPGKSPGTR PEDEAEGKPP QREKWASKID ENSTTRP00000000743/1-621 NMATKEKLQC LKDFHKDILK PSPGKSPGTR PEDEAEGKPP QREKWASKID 51 100 ENSP00000398063/1-620 FVLSVAGGFV GLGNVWRFPY LCYKNGGGAF LIPYFIFLFG SGLPVFFLEI ENSBTAP00000014720/1-620 FVLSVAGGFV GLGNVWRFPY LCYKNGGGAF LIPYFIFLFG GGLPVFFLEV bmy_19603T0/1-697 FVLSVAGGFV GLGNVWRFPY LCYKNGG--- ---------- ---------- BACU009996/1-628 FVLSVAGGFV GLGNVWRFPY LCYKNGGGAF LIPYFIFLFG GGLPVFFLEV ENSTTRP00000000743/1-621 FVLSVAGGFV GLGNVWRFPY LCYKNGGGAF LIPYFIFLFG GGLPVFFLEV 101 150 ENSP00000398063/1-620 IIGQYTSEGG ITCWEKICPL FSGIGYASVV IVSLLNVYYI VILAWATYYL ENSBTAP00000014720/1-620 IIGQYTSEGG ITCWEKICPL FAGIGYASIV IVSLLNIYYI IILAWAMYYL bmy_19603T0/1-697 ---------- ---------- --GIGYASIV IVSLLNIYYI IILAWATYYL BACU009996/1-628 IIGQYTSEGG ITCWEKICPL FAGIGYASIV IVSLLNIYYI IILAWATYYL ENSTTRP00000000743/1-621 IIGQYTSEGG ITCWEKICPL FAGIGYASIV IVSLLNIYYI IILAWATYYL 151 200 ENSP00000398063/1-620 FQSFQKELPW AHCNHSWNTP HCMEDTMRKN KSVWITISST NFTSPVIEFW ENSBTAP00000014720/1-620 FQSFQSELPW AKCNHSWNTP HCLEDTLRRN RSLWISNSTA NFTSPVTEFW bmy_19603T0/1-697 FQSFQSELPW ANCNHSWNTP QCLEDTLRRN KSLWISLSTA NFTSPVTEFW BACU009996/1-628 FQSFQSELPW ANCNHSWNTP QCLEDTLRRN KSLWISLSTA NFTSPVTEFW ENSTTRP00000000743/1-621 FQSFQSELPW ANCNHSWNTP QCLEDTLRRN KSLWISLSTT NFTSPVTEFW 201 250 ENSP00000398063/1-620 ERNVLSLSPG IDHPGSLKWD LALCLLLVWL VCFFCIWKGV RSTGKVVYFT ENSBTAP00000014720/1-620 ERKVLSLSSG IDEPGALKWD LALCLLLVWL VCFFCIWKGV KSTGKVVYFT bmy_19603T0/1-697 ERNVLSLSSG IDELGALKWD LALCLLLVWL VCFFCIWKGV KSTGKVVYFT BACU009996/1-628 ERNVLSLSSG IDELGALKWD LALCLLLVWL VCFFCIWKGV KSTGKVVYFT ENSTTRP00000000743/1-621 ERNVLSLSSG IDELGALKWD LALCLLLVWL VCFFCIWKGV KSTGKVVYFT 251 300 ENSP00000398063/1-620 ATFPFAMLLV LLVRGLTLPG AGAGIKFYLY PDITRLEDPQ VWIDAGTQIF ENSBTAP00000014720/1-620 ATFPFAMLLV LLVRGLTLPG AGAGIKFYLY PDISRLEDPQ VWIDAGTQIF bmy_19603T0/1-697 ATFPFAMLLV LLVRGLTLPG AGAGIKFYLY PDISRLEDPQ VWIDAGTQIF BACU009996/1-628 ATFPFAMLLV LLVRGLTLPG AGAGIKFYLY PDISRLEDPQ VWIDAGTQIF ENSTTRP00000000743/1-621 ATFPFAMLLV LLVRGLTLPG AGAGIKFYLY PDISRLEDPQ VWIDAGTQIF 301 350 ENSP00000398063/1-620 FSYAICLGAM TSLGSYNKYK YNSYR----- ---DCMLLGC LNSGTSFVSG ENSBTAP00000014720/1-620 FSYAICLGAM TSLGSYNKYK YNSYR----- ---DCMLLGC LNSGTSFVSG bmy_19603T0/1-697 FSYAICLGAM TSLGSYNKYK YNSYRQVSHQ RAWDCMLLGC LNSGTSFVSG BACU009996/1-628 FSYAICLGAM TSLGSYNKYK YNSYRQVLHQ RAWDCMLLGC LNSGTSFVSG ENSTTRP00000000743/1-621 FSYAICLGAM TSLGSYNKYK YNSYR----- ---DCMLLGC LNSGTSFVSG 351 400 ENSP00000398063/1-620 FAIFSILGFM AQEQGVDIAD VAESGPGLAF IAYPKAVTMM PLPTFWSILF ENSBTAP00000014720/1-620 FAIFSILGFM AQEQGVDIAD VAESGPGLAF IAYPKAVTMM PLPTFWSILF bmy_19603T0/1-697 FAIFSILGFM AQEQGVDIAD VAESGPGLAF IAYPKAVTMM PLPTFWSILF BACU009996/1-628 FAIFSILGFM AQEQGVDIAD VAESGPGLAF IAYPKAVTMM PLPTFWSILF ENSTTRP00000000743/1-621 FAIFSILGFM AQEQGVDIAD VAESGPGLAF IAYPKAVTMM PLPTFWSILF 401 450 ENSP00000398063/1-620 FIMLLLLGLD SQFVEVEGQI TSLVDLY--- ---------- ---------- ENSBTAP00000014720/1-620 FIMLLLLGLD SQFVEVEGQI TSLVDLH--- ---------- ---------- bmy_19603T0/1-697 FIMLLLLGLD SQFVEVEGQI TSLVDLHPSF LRKGFRREIF IASICCVSYL BACU009996/1-628 FIMLLLLGLD SQFVEVEGQI TSLVDLH--- ---------- ---------- ENSTTRP00000000743/1-621 FIMLLLLGLD SQFVEVEGQI TSLVDLH--- ---------- ---------- 451 500 ENSP00000398063/1-620 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014720/1-620 ---------- ---------- ---------- ---------- ---------- bmy_19603T0/1-697 LGLTMVTEGG MYVFQLFDYY AASGVCLLWV AFFECFAIAW IYGSDNFYDG BACU009996/1-628 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000743/1-621 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000398063/1-620 ---------- ---------- ---------- ---------- -PSFLRKGYR ENSBTAP00000014720/1-620 ---------- ---------- ---------- ---------- -PSLLRKGFH bmy_19603T0/1-697 IEDMIGYRPG PWMKYSWAVV TPLLCLFVEV EGQITSLVDL HPSFLRKGFR BACU009996/1-628 ---------- ---------- ---------- ---------- -PSFLRKGFR ENSTTRP00000000743/1-621 ---------- ---------- ---------- ---------- -PSFLRKGFR 551 600 ENSP00000398063/1-620 REIFIAFVCS ISYLLGLTMV TEGGMYVFQL FDYYAASGVC LLWVAFFECF ENSBTAP00000014720/1-620 REIFIASICC VSYLLGLTMV TEGGMYVFQL FDYYAASGVC LLWVAFFECF bmy_19603T0/1-697 REIFIASICC VSYLLGLTMV TEGGMYVFQL FDYYAASGVC LLWVAFFECF BACU009996/1-628 REIFIASICC VSYLLGLTMV TEGGMYVFQL FDYYAASGVC LLWVAFFECF ENSTTRP00000000743/1-621 REIFIASICC VSYLLGLTMV TEGGMYVFQL FDYYAASGVC LLWVAFFECF 601 650 ENSP00000398063/1-620 VIAWIYGGDN LYDGIEDMIG YRPGPWMKYS WAVITPVLCV GCFIFSLVKY ENSBTAP00000014720/1-620 AIAWIYGSDN FYDGIEDMIG YRPGPWMKYC WAVVTPLLCT GCFIFSLVKY bmy_19603T0/1-697 AIAWIYGSDN FYDGIEDMIG YRPGPWMKYS WAVVTPLLCL GCFIFSLVKY BACU009996/1-628 AIAWIYGSDN FYDGIEDMIG YRPGPWMKYS WAVVTPLLCL GCFIFSLVKY ENSTTRP00000000743/1-621 AIAWIYGSDN FYDGIEDMIG YRPGPWMKYS WAVVTPLLCL GCFIFSLVKY 651 700 ENSP00000398063/1-620 VPLTYNKTYV YPNWAIGLGW SLALSSMLCV PLVIVIRLCQ TEGPFLVRVK ENSBTAP00000014720/1-620 VPLTYNKVYT YPTWAIGLGW CLALSSMVCV PLVMVIRLAQ TEGPFLVRLK bmy_19603T0/1-697 IPLTYNKVYV YPNWAIGLGW SLALSSIVCV PLVMVIRLCQ TEGPFLVRLK BACU009996/1-628 IPLTYNKVYV YPNWAIGLGW SLALSSIVCV PLVMVIRLCQ TEGPFLVRLK ENSTTRP00000000743/1-621 VPLTYNKVYV YPNWAIGLGW SLALSSIVCV PLVMVIRLCQ TEGPFLVRLK 701 750 ENSP00000398063/1-620 YLLTPREPNR WAVEREGATP YNSRTVMNGA LVKPTHIIVE TMM ENSBTAP00000014720/1-620 YLLTPREPNR WAVEHEGAMP YSSRMAVNNT LRKPTHIIVE TMM bmy_19603T0/1-697 YLLTPREPNR WAVEREGATP YSSRISVNSA LRKPTHIIVE TMM BACU009996/1-628 YLLTPREPNR WAVEREGAMP YSSRMSVNSS LRKPTHIIVE TMM ENSTTRP00000000743/1-621 YLLTPREPNR WAVEREGAMP YSSRMSVNST LRKPTHIIVE TMM