KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:37 2014 Check: 00 .. Name: ENSP00000352527/1-499 Len: 499 Check: 1565 Weight: 1.00 Name: bmy_08561T0/1-468 Len: 499 Check: 919 Weight: 1.00 Name: ENSBTAP00000014756/1-497 Len: 499 Check: 7967 Weight: 1.00 Name: BACU018007/1-499 Len: 499 Check: 5407 Weight: 1.00 Name: ENSTTRP00000000398/1-499 Len: 499 Check: 7390 Weight: 1.00 // 1 50 ENSP00000352527/1-499 MVDRGPLLTS AIIFYLAIGA AIFEVLEEPH WKEAKKNYYT QKLHLLKEFP bmy_08561T0/1-468 MGERRPGDVS AL-------- ---------- ------GGHT QELTELTLAA ENSBTAP00000014756/1-497 MVDRGPLLTS AIIFYLAIGA AIFEVLEEPH WKEAKTNYYT QKVHLLKEFP BACU018007/1-499 MVDRGPLLTS AIIFYLAIGA AIFEVLEEQH GKEAKKNYYT QKLHLLKEFP ENSTTRP00000000398/1-499 MVDRGPLLTS AIIFYLAIGA AIFEVLEEPH WKEAKKNYYT QKLHLLKEFP 51 100 ENSP00000352527/1-499 CLGQEGLDKI LEVVSDAAGQ GVAITGNQTF NNWNWPNAMI FAATVITTIG bmy_08561T0/1-468 VL-------T VGIVSDAAGQ GVAITGNQTF NNWNWPNAMI FAATVITTIG ENSBTAP00000014756/1-497 CLGQDGLDKI LQIVSDAAGQ GVAITGNQTF NNWNWPNAMI FAATVITTIG BACU018007/1-499 CLGQEGLDKI LQIVSDAAGQ GVAITGNQTF NNWNWPNAMI FAATVITTIG ENSTTRP00000000398/1-499 CLGQEGLDKI LQIVSDAAGQ GVAITGNQTF NNWNWPNAMI FAATVITTIG 101 150 ENSP00000352527/1-499 YGNVAPKTPA GRLFCVFYGL FGVPLCLTWI SALGKFFGGR AKRLGQFLTK bmy_08561T0/1-468 YGNVAPKTPA GRLFCVFYGL FGVPLCLTWI SALGKFFGGR AKRLGQFLTK ENSBTAP00000014756/1-497 YGNVAPKTPA GRLFCVFYGL FGVPLCLTWI SALGKFFGGR AKRLGQFLTK BACU018007/1-499 YGNVAPKTPA GRLFCVFYGL FGVPLCLTWI SALGKFFGGR AKRLGQFLTK ENSTTRP00000000398/1-499 YGNVAPKTPA GRLFCVFYGL FGVPLCLTWI SALGKFFGGR AKRLGQFLTK 151 200 ENSP00000352527/1-499 RGVSLRKAQI TCTVIFIVWG VLVHLVIPPF VFMVTEGWNY IEGLYYSFIT bmy_08561T0/1-468 RGVSLRKAQI TCTAIFILWG VLVHLVIPPF VFMVTEEWNY IEGLYYSFIT ENSBTAP00000014756/1-497 RGVSLRKAQI TCTAIFILWG VLVHLVIPPF VFMVTEEWDY IEGLYYSFIT BACU018007/1-499 RGVSLRKAQI TCTAIFILWG VLVHLVIPPF VFMVTEEWNY IEGLYYSFIT ENSTTRP00000000398/1-499 RGVSLRKAQI TCTAIFILWG VLVHLVIPPF VFMVTEEWDY IEGLYYSFIT 201 250 ENSP00000352527/1-499 ISTIGFGDFV AGVNPSANYH ALYRYFVELW IYLGLAWLSL FVNWKVSMFV bmy_08561T0/1-468 ISTIGFGDFV AGVNPSANYH ALYRYFVELW IYLGLAWLSL FVNWKVSMFV ENSBTAP00000014756/1-497 ISTIGFGDFV AGVNPSANYH ALYRYFVELW IYLGLAWLSL FVNWKVSMFV BACU018007/1-499 ISTIGFGDFV AGVNPSANYH ALYRYFVELW IYLGLAWLSL FVNWKVSMFV ENSTTRP00000000398/1-499 ISTIGFGDFV AGVNPSANYH ALYRYFVELW IYLGLAWLSL FVNWKVSMFV 251 300 ENSP00000352527/1-499 EVHKAIKKRR RRRKESFESS PHSRKALQVK GSTASKDVNI FSFLSKKEET bmy_08561T0/1-468 EVHKAIKKRR RRRKESFESS PHSRKALQVA GSAASKDVNI FSFLSKKEET ENSBTAP00000014756/1-497 EVHKAIKKRR RRRKESFESS PHSRKALQVA SGAASKDVNI FSFLSKKEET BACU018007/1-499 EVHKAIKKRR RRRKESFESS PHSRKALQVA GGAASKDVNI FSFLSKKEET ENSTTRP00000000398/1-499 EVHKAIKKRR RRRKESFESS PHSRKALQVA GGAASKDVNI FSFLSKKEET 301 350 ENSP00000352527/1-499 YNDLIKQIGK KAMKTSGGGE TGPGPGLGPQ GGGLPALPPS LVPLVVYSKN bmy_08561T0/1-468 YNDLIKQIGK KAMKTGGGGE RVPGPGLGPQ GGGLTALPTS LTPLVVYSKN ENSBTAP00000014756/1-497 YNDLIKQIGK KAMKTGGGGE RGPGP--GPP RAGLPALPAS LTPLVVYSKS BACU018007/1-499 YNDLIKQIGK KAMKRGWGGE RVPGPSLGPQ GGGLTALPTS LSPLVVYSKN ENSTTRP00000000398/1-499 YNDLIKQIGK KAMKTGGGGE RVPGPGLGPQ GGGLTALPTS LTPLVVYSKN 351 400 ENSP00000352527/1-499 RVPTLEEVSQ TLRSKGHVSR SPDEEAVARA PEDSSPAPEV FMNQLDRISE bmy_08561T0/1-468 RVPSLEEVSQ TLRSKGHMSR PPGEEAGAGP PEEGTPTSEV FINQLDRISE ENSBTAP00000014756/1-497 QVPSLEEVSQ TLRSKGHVSR PSGEEAGAGP PEEGSPTSEV FINQLDRISE BACU018007/1-499 RVPSLEEVSQ TLRSKGHMSR PPGEEAGAGP PEEGSPASEV FINQLDRISE ENSTTRP00000000398/1-499 RVPSLEEVSQ TLRSKGHVSR PPGEEAGAGP PEEGSPTSEV LINQLDRISE 401 450 ENSP00000352527/1-499 ECEPWDAQDY HPLIFQDASI TFVNTEAGLS DEETSKSSLE DNLAGEESPQ bmy_08561T0/1-468 EGELWDAQDY HPLIFQNVNI TFVSEEAGLS DEDTSKSSLE DNLAGEERPQ ENSBTAP00000014756/1-497 EGEPWDAQDY HPLIFQNADI TFANEEAGLL DEDTSKSSLE DNLAGEERPQ BACU018007/1-499 EGEPWDAQDY HPLIFQNVNI TFVSEEAGLS DEDTSKSSLE DNLAGEERPQ ENSTTRP00000000398/1-499 EGEPWDAQDY HPLIFQNVSI TFVNEEAGLS DEDTSKSSLE DNLAGEERPQ 451 500 ENSP00000352527/1-499 QGAEAKAPLN MGEFPSSSES TFTSTESELS VPYEQLMNEY NKANSPKGT bmy_08561T0/1-468 EGATAEVPLN LGEFPSSDES TFTSTESELS VPYEQLMNEY NKANCPKGT ENSBTAP00000014756/1-497 EGATAEAPLN LGEFPSSDES TFTSTESELS VPYEQLMNEY NKAKCPEGT BACU018007/1-499 EGAAAEVPLN LGEFPSSDES TFTSTESELS VPYEQFMNEY NKANCPKGT ENSTTRP00000000398/1-499 EGATAEVPLN LGEFPSSDES TFTSTESELS VPYEQLMNEY NKANCPKGT