KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:43 2014 Check: 00 .. Name: ENSTTRP00000003565/1-601 Len: 621 Check: 5573 Weight: 1.00 Name: ENSP00000264381/1-602 Len: 621 Check: 3011 Weight: 1.00 Name: ENSBTAP00000014794/1-602 Len: 621 Check: 7313 Weight: 1.00 Name: bmy_19708T0/1-525 Len: 621 Check: 1160 Weight: 1.00 Name: BACU017838/1-506 Len: 621 Check: 3410 Weight: 1.00 // 1 50 ENSTTRP00000003565/1-601 ---------- ---------M QSKGTIIYIR FLLRFLLLWV LFGKSHTEED ENSP00000264381/1-602 ---------- ---------M HSKVTIICIR FLFWFLLLCM LIGKSHTEDD ENSBTAP00000014794/1-602 ---------- ---------M QSRSTVIYIR FVLWFLLLWV LFEKSHTEED bmy_19708T0/1-525 MISIPCKLYH LHCSESETNM QSKGTIIYIR FLLXFLLLWV LFGKSHTEED BACU017838/1-506 ---------- ---------M QSKGTIIYIR FLLRFLLLWV LFGKSHTEED 51 100 ENSTTRP00000003565/1-601 VIITTKNGKV RGMNLPVLGG TVTAFLGIPY AQPPLGRLRF KKPQSLTKWP ENSP00000264381/1-602 IIIATKNGKV RGMNLTVFGG TVTAFLGIPY AQPPLGRLRF KKPQSLTKWS ENSBTAP00000014794/1-602 IIITTKNGKV RGMHLPVLGG TVTAFLGIPY AQPPLGRLRF KKPQSLTKWP bmy_19708T0/1-525 VIITTKNGKV RGMNLPVLGG TVTAFLGIPY AQPPLGRLRF KKPQSLTKWP BACU017838/1-506 VIITTKNGKV RGMNLPVLGG TVTAFLGIPY AQPPLGRLRF KKPQSLTKWP 101 150 ENSTTRP00000003565/1-601 NIWNATKYAN SCYQNTDQSF PGFLGSEMWN PNTDLSEDCL YLNVWIPAPK ENSP00000264381/1-602 DIWNATKYAN SCCQNIDQSF PGFHGSEMWN PNTDLSEDCL YLNVWIPAPK ENSBTAP00000014794/1-602 DIWNATKYAN SCYQNTDQSF PGFLGSEMWN PNTDLSEDCL YLNVWIPTPK bmy_19708T0/1-525 NIWNATKYAN SCYQNTDQSF PGFLGSEMWN PNTDLSEDCL YLNVWIPAPK BACU017838/1-506 NIWNATKYAN SCYQNTDQSF PGFLGSEMWN PNTDLSEDCL YLNVWIPAPK 151 200 ENSTTRP00000003565/1-601 PKNATVMIWI YGGGFQTGTS SLHVYDGKFL ARAERVIVVS MNYRVGALGF ENSP00000264381/1-602 PKNATVLIWI YGGGFQTGTS SLHVYDGKFL ARVERVIVVS MNYRVGALGF ENSBTAP00000014794/1-602 PKNATVMIWI YGGSFQTGTS SLHVYDGKFL ARVERVIVVS MNYRVGALGF bmy_19708T0/1-525 PKNATVMVWI YGGGFQTGTS SLHVYDGKFL AXAERVIVVS MNYRVGALGF BACU017838/1-506 PKNATVMVWI YGGGFQTGTS SLHVYDGKFL ARTERVIVVS MNYRVGALGF 201 250 ENSTTRP00000003565/1-601 LALPGNPEAP GNTGLFDQQM ALQWVQKNIA AFGGNPKSVT LFGESAGAAS ENSP00000264381/1-602 LALPGNPEAP GNMGLFDQQL ALQWVQKNIA AFGGNPKSVT LFGESAGAAS ENSBTAP00000014794/1-602 LALPGNPEAP GNVGLFDQQL ALQWVQKNIA AFGGNPKSVT LFGESAGAAS bmy_19708T0/1-525 LALPGNPEAP GNTGLFDQQL ALQWVQKNIA AFGGNPKSVT LFGESAGAAS BACU017838/1-506 LALPGNPEAP GNTGLFDQQL ALQWVQTNIA AFGGNPKSVT LFGESAGAAS 251 300 ENSTTRP00000003565/1-601 VSLHLLSPRS HPLFTRAILQ SGSSNSPWVV TSLYEARNRT LTLAKFIGCS ENSP00000264381/1-602 VSLHLLSPGS HSLFTRAILQ SGSFNAPWAV TSLYEARNRT LNLAKLTGCS ENSBTAP00000014794/1-602 VSLHLLSPES HPLFTRAILQ SGSSNAPWAV TSRYEARNRT LTLAKFIGCS bmy_19708T0/1-525 VSLHLLSPRS HPLFTRAILQ SGSSNSPWVV TSLYEARNRT LTLAKFIXCS BACU017838/1-506 VSLHLLSPRS HPLFTRAILQ SGSSNSPWVV TSLYEARNRT LTLAKFIGCS 301 350 ENSTTRP00000003565/1-601 RENETEIIKC LRNKDPHEIL LNEVFVVPYG TLLSVNFGPT VDGDFLTDMP ENSP00000264381/1-602 RENETEIIKC LRNKDPQEIL LNEAFVVPYG TPLSVNFGPT VDGDFLTDMP ENSBTAP00000014794/1-602 RENDTEIIKC LRNKDPQEIL RHEVFVVPYG TLLSVNFGPT VDGDFLTDMP bmy_19708T0/1-525 RENETEIIKC LRNKDPQEIL LNEVFVVPYG TLLSVNFGPT VDGDFLTDMP BACU017838/1-506 RENETEIIKC LRNKDPQEIL LNEVFVVPYG TLLSVNFGPT VDGDFLTDMP 351 400 ENSTTRP00000003565/1-601 DTLLQLGQF- KTQXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000264381/1-602 DILLELGQFK KTQILVGVNK DEGTAFLVYG APGFSKDNNS IITRKEFQEG ENSBTAP00000014794/1-602 DTLLQLGQFK KTQILVGVNK DEGTAFLVYG APGFSKDNNS IITRKEFQEG bmy_19708T0/1-525 DTLLQLGQFK KTQILVGVNK DEGTAFLVYG APGFSKDNNS IITRKEFQEG BACU017838/1-506 DTLLQLGQFK KTQILVGVNK DEGTAFLVYG APGFSKDNNS IITRKEFQEG 401 450 ENSTTRP00000003565/1-601 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000264381/1-602 LKIFFPGVSE FGKESILFHY TDWVDDQRPE NYREALGDVV GDYNFICPAL ENSBTAP00000014794/1-602 LKIFFPGVSE FGKESILFHY MDWLDDQRAE KYREALDDVV GDYNIICPAL bmy_19708T0/1-525 LKIFFPGLSE FGKESILFHY MDWLDDQRAE NYREALDDVV GDYNIICPAL BACU017838/1-506 LKIFFPGLSE FGKESILFHY MDWLDDQRAE NYREALDDVV GDYNIICPAL 451 500 ENSTTRP00000003565/1-601 XXXXXXSDMG NNAFFYYFEH RSSKLPWPEW MGVMHGYEIE FVFGLPLERR ENSP00000264381/1-602 EFTKKFSEWG NNAFFYYFEH RSSKLPWPEW MGVMHGYEIE FVFGLPLERR ENSBTAP00000014794/1-602 EFTKKFSDMG NNAFFYYFEH RSSKLPWPEW MGVMHGYEIE FVFGLPLERR bmy_19708T0/1-525 EFTKKFSDMG NNAFFYYFEH RSSKLPWPEW MGVMHGYEIE FVFGLPLERR BACU017838/1-506 EFTKKFSDMG NNAFFYYFEH RSSKLPWPEW MGVMHGYEIE FVFGLPLERR 501 550 ENSTTRP00000003565/1-601 VNYTKAEEIL SRSIMKRWAN FAKYGNPNGT QNNSTRWPVF KSNEQKYLTL ENSP00000264381/1-602 DNYTKAEEIL SRSIVKRWAN FAKYGNPNET QNNSTSWPVF KSTEQKYLTL ENSBTAP00000014794/1-602 VNYTKAEEIF SRSIMKRWAN FAKYGNPNGT QNNSTRWPVF KSNEQKYFTL bmy_19708T0/1-525 VNYTKAEEIL SRSIMKRWAN FAKYG----- ---------- ---------- BACU017838/1-506 VNYTKAEEIL SRSIMKRWAN FAKYG----- ---------- ---------- 551 600 ENSTTRP00000003565/1-601 NTESPRVYTK LRAQQCRFWT LFFPKVLEMT GNIDEAEREW KAGFHRWNNY ENSP00000264381/1-602 NTESTRIMTK LRAQQCRFWT SFFPKVLEMT GNIDEAEWEW KAGFHRWNNY ENSBTAP00000014794/1-602 NTESPKVNTK LRAQQCRFWT LFFPKVLEIT GNIDEVEREW KAGFHRWNNY bmy_19708T0/1-525 ---------- ---------- ---------- ---------- ---------- BACU017838/1-506 ---------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000003565/1-601 MMDWKNQFND YTSKKESCAG L ENSP00000264381/1-602 MMDWKNQFND YTSKKESCVG L ENSBTAP00000014794/1-602 MMDWKNQFND YTSKKESCAG L bmy_19708T0/1-525 ---------- ---------- - BACU017838/1-506 ---------- ---------- -