KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:53:43 2014 Check: 00 ..
Name: bmy_03229T0/1-444 Len: 538 Check: 3943 Weight: 1.00
Name: ENSP00000343701/1-538 Len: 538 Check: 5855 Weight: 1.00
Name: ENSTTRP00000012719/1-538 Len: 538 Check: 6215 Weight: 1.00
Name: BACU020077/1-538 Len: 538 Check: 5735 Weight: 1.00
Name: ENSBTAP00000014799/1-538 Len: 538 Check: 6493 Weight: 1.00
//
1 50
bmy_03229T0/1-444 ---------- ---------- ---------- ---------- ----------
ENSP00000343701/1-538 MTTPGKENFR LKSYKNKSLN PDEMRRRREE EGLQLRKQKR EEQLFKRRNV
ENSTTRP00000012719/1-538 MTTPGRENFR LKSYKNKSLN PDEMRRRREE EGLQLRKQKR EEQLFKRRNV
BACU020077/1-538 MTTQGKENFR LKSYKNKSLN PDEMRRRREE EGLQLRKQKR EEQLFKRRNV
ENSBTAP00000014799/1-538 MTTPGKENFR LKSYKNKSLN PDEMRRRREE EGLQLRKQKR EEQLFKRRNV
51 100
bmy_03229T0/1-444 ---------- -MSDGGFHEA QINNMEMAPG GVITSDMIEM IFSNSPEQQL
ENSP00000343701/1-538 ATAEEETEEE VMSDGGFHEA QISNMEMAPG GVITSDMIEM IFSKSPEQQL
ENSTTRP00000012719/1-538 ATAEEETEEE VMSDGGFHEA QINNMEMAPG GVITSDMIEM IFSNSPEQQL
BACU020077/1-538 ATAEEETEEE VMSDGGFHEA QINNMEMAPG GVITSDMIEM IFSNSPEQQL
ENSBTAP00000014799/1-538 ATAEEETEEE VMSDGGFHEA QINNMEMAPG GVITSDMIEM IFSNSPEQQL
101 150
bmy_03229T0/1-444 SATQKFRKLL SKEPNPPIDE VISTPGVVAR FVEFLKRKEN CTLQFESAWV
ENSP00000343701/1-538 SATQKFRKLL SKEPNPPIDE VISTPGVVAR FVEFLKRKEN CTLQFESAWV
ENSTTRP00000012719/1-538 SATQKFRKLL SKEPNPPIDE VISTPGVVAR FVEFLKRKEN CTLQFESAWV
BACU020077/1-538 SATQKFRKLL SKEPNPPIDE VISAPGVVAR FVEFLKRKEN CTLQFESAWV
ENSBTAP00000014799/1-538 SATQKFRKLL SKEPNPPIDE VISTPGVVAR FVEFLKRKEN CTLQFESAWV
151 200
bmy_03229T0/1-444 LTNIASGNSL QTRIVIQAGA VPIFIELLSS EFEDVQEQAV WALGNIAGDS
ENSP00000343701/1-538 LTNIASGNSL QTRIVIQAGA VPIFIELLSS EFEDVQEQAV WALGNIAGDS
ENSTTRP00000012719/1-538 LTNIASGNSL QTRIVIQAGA VPIFIELLSS EFEDVQEQAV WALGNIAGDS
BACU020077/1-538 LTNIASGNSL QTRIVIQAGA VPIFIELLSS EFEDVQEQAV WALGNIAGDS
ENSBTAP00000014799/1-538 LTNIASGNSL QTRIVIQAGA VPIFIELLSS EFEDVQEQAV WALGNIAGDS
201 250
bmy_03229T0/1-444 TMCRDYVLDC NILPPLLQLF SKQNRLTMTR NAVWALSNLC RGKSPPPEFA
ENSP00000343701/1-538 TMCRDYVLDC NILPPLLQLF SKQNRLTMTR NAVWALSNLC RGKSPPPEFA
ENSTTRP00000012719/1-538 TMCRDYVLDC NILPPLLQLF SKQNRLTMTR NAVWALSNLC RGKSPPPEFA
BACU020077/1-538 TMCRDYVLDC NILPPLLQLF SKQNRLTMTR NAVWALSNLC RGKSPPPEFA
ENSBTAP00000014799/1-538 TMCRDYVLDC NILPPLLQLF SKQNRLTMTR NAVWALSNLC RGKSPPPEFA
251 300
bmy_03229T0/1-444 KVSPCLNVLS WLLFVSDTDV LADACWALSY LSDGPNDKIQ AVIDAGVCRR
ENSP00000343701/1-538 KVSPCLNVLS WLLFVSDTDV LADACWALSY LSDGPNDKIQ AVIDAGVCRR
ENSTTRP00000012719/1-538 KVSPCLNVLS WLLFVSDTDV LADACWALSY LSDGPNDKIQ AVIDAGVCRR
BACU020077/1-538 KVSPCLNVLS WLLFVSDTDV LADACWALSY LSDGPNDKIQ AVIDAGVCRR
ENSBTAP00000014799/1-538 KVSPCLNVLS WLLFVSDTDV LADACWALSY LSDGPNDKIQ AVIDAGVCRR
301 350
bmy_03229T0/1-444 LVELLMHNDY KVVSPALRAV GNIVTGDDIQ TQVILNCSAL QSLLHLLSSP
ENSP00000343701/1-538 LVELLMHNDY KVVSPALRAV GNIVTGDDIQ TQVILNCSAL QSLLHLLSSP
ENSTTRP00000012719/1-538 LVELLMHNDY KVVSPALRAV GNIVTGDDIQ TQVILNCSAL QSLLHLLSSP
BACU020077/1-538 LVELLMHNDY KVVSPALRAV GNIVTGDDIQ TQVILNCSAL QSLLHLLSSP
ENSBTAP00000014799/1-538 LVELLMHNDY KVVSPALRAV GNIVTGDDVQ TQVILNCSAL QSLLHLLSSP
351 400
bmy_03229T0/1-444 KESIKKEACW TISNITAGNR AQIQCSV--- ---------- ----------
ENSP00000343701/1-538 KESIKKEACW TISNITAGNR AQIQTVIDAN IFPALISILQ TAEFRTRKEA
ENSTTRP00000012719/1-538 KESIKKEACW TISNITAGNR AQIQTVIDAN IFPALISILQ TAEFRTRKEA
BACU020077/1-538 KESIKKEACW TISNITAGNR AQIQTVIDAN IFPALISILQ TAEFRTRKEA
ENSBTAP00000014799/1-538 KESIKKEACW TISNITAGNR AQIQTVIDAN IFPALISILQ TAEFRTRKEA
401 450
bmy_03229T0/1-444 ---------- GNFNMRRYLV ELGCIKPLCD LLTVMDSKIV QVALNGLENI
ENSP00000343701/1-538 AWAITNATSG GSAEQIKYLV ELGCIKPLCD LLTVMDSKIV QVALNGLENI
ENSTTRP00000012719/1-538 AWAITNATSG GSSEQIKYLV ELGCIKPLCD LLTVMDSKIV QVALNGLENI
BACU020077/1-538 AWAITNATSG GSAEQIKYLV ELGCIKPLCD LLTVMDSKIV QVALNGLENI
ENSBTAP00000014799/1-538 AWAITNATSG GSAEQIKYLV ELGCIKPLCD LLTVMDSKIV QVALNGLENI
451 500
bmy_03229T0/1-444 LRLGEQEAKR NGTGINPYCA LIEEAYGLDK IEFLQSHENQ EIYQKAFDLI
ENSP00000343701/1-538 LRLGEQEAKR NGTGINPYCA LIEEAYGLDK IEFLQSHENQ EIYQKAFDLI
ENSTTRP00000012719/1-538 LRLGEQEAKR NGTGINPYCA LIEEAYGLDK IEFLQSHENQ EIYQKAFDLI
BACU020077/1-538 LRLGEQEAKR NGTGINPYCA LIEEAYGLDK IEFLQSHENQ EIYQKAFDLI
ENSBTAP00000014799/1-538 LRLGEQEAKR NGTGINPYCA LIEEAYGLDK IEFLQSHENQ EIYQKAFDLI
501 550
bmy_03229T0/1-444 EHYFGTEDED SSIAPQVDLS QQQYIFQQCE APMEGFQL
ENSP00000343701/1-538 EHYFGTEDED SSIAPQVDLN QQQYIFQQCE APMEGFQL
ENSTTRP00000012719/1-538 EHYFGTEDED SSIAPQVDLS QQQYIFQQCE APMEGFQL
BACU020077/1-538 EHYFGTEDED SSIAPQVDLS QQQYIFQQCE APMEGFQL
ENSBTAP00000014799/1-538 EHYFGTEDED SSIAPQVDLS QQQYIFQQCE APMEGFQL