KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:46 2014 Check: 00 .. Name: ENSP00000331626/1-967 Len: 969 Check: 9625 Weight: 1.00 Name: ENSBTAP00000014826/1-969 Len: 969 Check: 5016 Weight: 1.00 Name: ENSTTRP00000014467/1-969 Len: 969 Check: 6931 Weight: 1.00 Name: bmy_18213T0/1-797 Len: 969 Check: 6425 Weight: 1.00 Name: BACU011876/1-969 Len: 969 Check: 4134 Weight: 1.00 // 1 50 ENSP00000331626/1-967 MAVALDSQID APLEVEGCLI MKVEKDPEWA SEPILEGSDS --SETFRKCF ENSBTAP00000014826/1-969 MAASLDPQTD APLEVEGCLI MKVEKEPEWI SEPTLEGSDS SESETFRRCF ENSTTRP00000014467/1-969 MAASLDPQID APLEVEGCLI MKVEKEPEWA SQPILEGSDS SESETFRKCF bmy_18213T0/1-797 MAASLDPQID APLEVEGCLI MKVEKEPEWA SQPILEGSDS SESETFRKCF BACU011876/1-969 MAASLDPQID APLEVEGCLI MKVEKEPEWA SQPILEGSDS SESETFRKCF 51 100 ENSP00000331626/1-967 RQFCYEDVTG PHEAFSKLWE LCCRWLKPEM RSKEQILELL VIEQFLTILP ENSBTAP00000014826/1-969 RQFCYEDVTG PHEAFSKLWE LCCRWLKPEM RSKEQILELL VIEQFLTILP ENSTTRP00000014467/1-969 RQFCYEDVTG PHEAFSKLWE LCCRWLKPEM RSKEQILELL VIEQFLTILP bmy_18213T0/1-797 RQFCYEDVTG PHEAFSKLWE LCCRWLKPEV HSKEQILELL VIEQFLTILP BACU011876/1-969 RQFCYEDVTG PHEAFSKLWE LCCRWLKPEM RSKEQILELL VIEQFLTILP 101 150 ENSP00000331626/1-967 EKIQAWAQKQ CPQSGEEAVA LVVHLEKETG RLRQQVSSPV HREKHSPLGA ENSBTAP00000014826/1-969 EKIQLWAQKQ CPESGEEAVA LVIHLEKETG GLRQQVSSPV HSEKQAPLGA ENSTTRP00000014467/1-969 EKIQAWAQKQ CPESGEEAVA LVIHLEKETG RLRQQVSSPV YSEKQAPLGA bmy_18213T0/1-797 EKIQAWAQKQ CPESGEEAVA LVIHLEKETG RLRQQVSSPM HSEKQAPLGA BACU011876/1-969 EKIQAWAQKQ CPESGEEAVA LVIHLEKETG RLRQQVSSPM HSEKQASLGA 151 200 ENSP00000331626/1-967 AWEVADFQPE QVETQPRAVS REEPGSLHSG HQEQLNRKRE RRPLPKNARP ENSBTAP00000014826/1-969 AWEVADFQPQ PVEPQPRVMS QEEAESLHSG RQEQPNQKRE LRPLPKNARP ENSTTRP00000014467/1-969 AWEVADFQPQ QVETQPRVMS LEGAESLHSG HQEQLNQKRE LRPLPKNARL bmy_18213T0/1-797 AWEVADFQPE QVETQPRVMS LEGAESLHSG HQEQLNQKRA LRPLRKNARP BACU011876/1-969 AWEVADFQPE QVETQPRVMS LEGAESLHSG HQEQLNQKRE LRPLPKNARP 201 250 ENSP00000331626/1-967 SPWVPALADE WNTLDQEVTT TRLPAGSQEP VKDVHVARGF SYRKSVHQIP ENSBTAP00000014826/1-969 SPWVPSPANE WNTIDQEVTA TPVPVRSQGP VKDVHMARGF SYKKSVHQIP ENSTTRP00000014467/1-969 SPWVPAPADE WNTIDQEVTA TRVPVGSQGP LKDVHMARGF SYKKSVRQIP bmy_18213T0/1-797 SPWVPPPADE WNTIDQEVTA TRVPAGSQGP VKDVHMARGF SYKKSVRQIP BACU011876/1-969 SPWVPPPADE WNTIDQEVTA TRVPAGSQGP VKDVHMARAF SYKKSVRQIP 251 300 ENSP00000331626/1-967 AQRDLYRDFR KENVGNVVSL GSAVSTSNKI TRLEQRKEPW TLGLHSSNKR ENSBTAP00000014826/1-969 AHKDLYRDIR KESVGNMVSL GSTVSAANKI ARLEPRKEPW TISLQSSNKR ENSTTRP00000014467/1-969 AHRDLYRDIR KESIGNMVSL GNTVSTANKM AQLAQRKEPW TIGLQSPNKR bmy_18213T0/1-797 AHRDLYRDIR KESIGNMVSL GNTASTANKM AQLEQRKEPW TIGLQSPNKR BACU011876/1-969 AHRDLYRDIR KESIGNMVSL GNTVSTANKM AQLEQRKEPW TIGLQSPNKR 301 350 ENSP00000331626/1-967 SILRSNYVKE KSVHAIQVPA RSAGKTWREQ QQWGLEDEKI AGVHWSYEET ENSBTAP00000014826/1-969 TVLQSNYIKE KSVHAIQIPA RNAGKTWREQ QQWGLEDEKI AGVHWSYEET ENSTTRP00000014467/1-969 NVLQSNYIKE KSVHAIQTPA RNAGKTRREQ QQWGLEDEKI AGVHWSYEET bmy_18213T0/1-797 NVLRSNYIKE KSVHAIQAPA RNAGKTRREQ QQWGLEDEKI AGVHWSYEET BACU011876/1-969 NVLRSNYIKE KSVHAIQTPA RNAGKTRREQ QQWGLEDEKI AGVHWSYEET 351 400 ENSP00000331626/1-967 KTFLAILKES RFYETLQACP RNSQVYGAVA EWLRECGFLR TPEQCRTKFK ENSBTAP00000014826/1-969 KTFLAILKES RFYETLQACP RNSQVYGAVA EWLRECGFLR TPEQCRTKFK ENSTTRP00000014467/1-969 KTFLTILKES RFYETLQACP RNSQVYGAVA EWLRECGFLR TPEQCRTKFK bmy_18213T0/1-797 KTFLAILKES RFYETLQACP RNSQVYGAVA EWLRECGFLR TPEQCRTKFK BACU011876/1-969 KTFLAILKES RFYETLQACP RNSQVYGAVA EWLRECGFLR TPEQCRTKFK 401 450 ENSP00000331626/1-967 SLQKSYRKVR NGHMLEPCAF FEDMDALLNP AARAPSTDKP KEMIPVPRLK ENSBTAP00000014826/1-969 SLQKSYRKVR NGHVLEPCAF FEDMDALLNP SAHASSMDKP KEILSLPRLK ENSTTRP00000014467/1-969 SLQKSYRKVR NGHVLEPCAF FEDMDVLLNP AAHTSSTDKP KEILSLPRLK bmy_18213T0/1-797 SLQKSYRKVR NGHVLEPCAF FEDMDALLNP AAHTSSTDKP KEXLSLPRLK BACU011876/1-969 SLQKSYRKVR NGHVLEPCAF FEDMDALLNP AAHTSSMDKP KEILSLPRLK 451 500 ENSP00000331626/1-967 RIAISAKEHI SLVEEEEAAE DSDDDEIGIE FIRKSEIHGA PVLFQNLSGV ENSBTAP00000014826/1-969 RIGISAKEQI NLVEEEEAAE ESDGDEMGIE FIRKPELHGA PVIFQNLSGV ENSTTRP00000014467/1-969 RIGINAKEQI NLVEEEEAAE ESDGDEMGVE FIQKSELRGA PVLFQNLSGV bmy_18213T0/1-797 RIGISAKEQI NLVEEEEAAE ESDGDEMXVE FIQKSELRGA PVLFQNLS-- BACU011876/1-969 RIGISAKEQI TLVEEEEAAE ESDGDEMGVE FIQKSELRGA PVLFQNLSGV 501 550 ENSP00000331626/1-967 HWGYEETKTF LDILRETRFY EALQACHRKS KLYGAVAEQL RECGFLRTPE ENSBTAP00000014826/1-969 HWGYEETKTF LDILHETRFY EALQACHRKS KLYGAVAEQL RECGFLRTPE ENSTTRP00000014467/1-969 HWGYEETKTF LDILRETRFY EALQACHRKS KLYGAVAEQL QECGFLRTPE bmy_18213T0/1-797 ---------- ---------- -ALQACHRKS KLYGAVAEQL RECGFLRTPE BACU011876/1-969 HWGYEETKTF LDILRETRFY EALQACHRKS KLYGAVAEQL RECGFLRTPE 551 600 ENSP00000331626/1-967 QCRTKFKSLQ KSYRKVKNGH VLESCAFYKE MDALINSRAS APSPSTPEEV ENSBTAP00000014826/1-969 QCRTKFKSLQ KSYRKVKNGH VLESCAFYKE MDALINSRAS AAPTSSPEEA ENSTTRP00000014467/1-969 QCRTKFKSLQ KSYRKVKNGH VLESCAFYKE MDALINSRAS APPTSTPEEA bmy_18213T0/1-797 QCRTKFKSLQ KSYRKVKNGH VLESCAFYKE MDALINSRAS ASPTSTPEEA BACU011876/1-969 QCRTKFKSLQ KSYRKVKNGH VLESCAFYKE MDALINSRAS ASPTSTPEEA 601 650 ENSP00000331626/1-967 PSPSRQERGG IEVEPQEPTG WEPEETSQEA VIEDSCSERM SEEEIVQEPE ENSBTAP00000014826/1-969 PSPSVQERED MEIEPQEPTV WEPEEDSQEV LVEDSGSERM SEEEIMQEPE ENSTTRP00000014467/1-969 PSPSIQERED IELEPQEPTG WEPEEDSQEA IVEDSSSERL SEEEIVPEPE bmy_18213T0/1-797 PSPSIQXRED IEIEPQEPXG WEPEEDSQEA IVEDSSSERL SEEEIVQEPE BACU011876/1-969 PSPSSQERED IEIDPQEPTG WEPEEDSQEA IVEDSSSERL SEEEIVQEPE 651 700 ENSP00000331626/1-967 FQGPPGLLQS PNDFEIGSSI KEDPTQIVYK DMEQHRALIE KSKRVVSQST ENSBTAP00000014826/1-969 FQGPPCLLQS PSDFEIESSI KEDATQVICK DMEQHRAFIE KSKRVVSQNV ENSTTRP00000014467/1-969 FQGLPGLLQS PSDFEIGSST KEDATQVIYK DMEQHRALIE KSKRVVSQNA bmy_18213T0/1-797 FQGPPGLLQS PSDFEIGSSI KEDATQVIYK DMEQHRALIE KSKRVVSQNA BACU011876/1-969 FQGPPGLLQS PSDFEIGSSI KEDATQVIYK DMEQHRALIE KSKRVVSQNA 701 750 ENSP00000331626/1-967 DPSKYRKREC ISGRQWENLQ GIRQGKPMSQ PRDLGKAVVH QRPFVGKRPY ENSBTAP00000014826/1-969 DPGKYCKRDC VSGGQWENLH GIRQGKLMPQ PRDLGKAVVH QRPLVGKRPF ENSTTRP00000014467/1-969 DPGKYCKREC ISGRQWDNLQ GVRQGKLMSQ PRDLGKAVVH QRPFMGKRPY bmy_18213T0/1-797 DPGKYCKREC ISGRQWENLQ GVRQGKLMSQ PRDLGKAIVH QRPFMGKRPY BACU011876/1-969 DPGKYCKREC ISGRQWENLQ GVRQGKLMPQ PRDLGKAVMH QRPFMGKRPY 751 800 ENSP00000331626/1-967 RLLKYGESFG RSTRLMCRMT HHKENPYKCG VCGKCFGRSR SLIRHQRIHT ENSBTAP00000014826/1-969 RLLRYGESFG RSARLMCRMT HQKENPSKCS VCGKCFGRSR SLVRHQRIHT ENSTTRP00000014467/1-969 RLLKYGESFG RSARLMCRMT HQKENPYKCS VCGKCFGRSR SLIRHQRIHT bmy_18213T0/1-797 RLLKYGESFG RSARLMCRMT HQKENPYKCS VCGKCFGRSR SLIRHQRIHT BACU011876/1-969 RLLKYGESFG RSARLMCRMT HQKENPYKCS VCGKCFGRSR SLIRHQRIHT 801 850 ENSP00000331626/1-967 GEKPFKCLDC GKSFNDSSNF GAHQRIHTGE KPYRCGECGK CFSQSSSLII ENSBTAP00000014826/1-969 GEKPFKCLDC GKSFNDSSNF GAHQRIHTGE KPYRCGECGK CFSQSSSLII ENSTTRP00000014467/1-969 GEKPFKCLDC GKSFNDSSNF GAHQRIHTGE KPYRCEECGK CFSQSSSLII bmy_18213T0/1-797 GEKPFKCLDC GKSFNDSSNF ---------- ---------- ---------- BACU011876/1-969 GEKPFKCLDC GKSFNDSSNF GAHQRIHTGE KPYRCGECGK CFSQSSSLII 851 900 ENSP00000331626/1-967 HQRTHTGEKP YQCGECGKSF TNSSHFSAHR RVHTGENPYK CVDCEKSFNN ENSBTAP00000014826/1-969 HQRTHTGEKP YQCGDCGRSF TNSSHFSAHR RVHTGENPYK CVDCEKSFNN ENSTTRP00000014467/1-969 HQRTHTGEKP YQCGECGKSF TNSSHFSAHR RVHTGENPYK CVDCEKSFNN bmy_18213T0/1-797 ---------- ---------- ---------- ---------- ---------- BACU011876/1-969 HQRTHTGEKP YQCGECGKSF TNSSHFSAHR RVHTGENPYK CVDCEKSFNN 901 950 ENSP00000331626/1-967 CTRFREHRRI HTGEKPYGCA QCGKRFSKSS VLTKHREVHV REKPLPHPPS ENSBTAP00000014826/1-969 CTRFREHRRV HSGEKPYGCS QCGRRFSKSS VLTKHREVHV REKLLPPPPA ENSTTRP00000014467/1-969 CTRFREHRRV HTGEKPYGCV QCGKRFSKSS VLTKHREVHV REKLLPYPPA bmy_18213T0/1-797 ---------- ---------- ---------- ---------- ---------- BACU011876/1-969 CTRFREHRRV HTGEKPYGCV QCGKRFSKSS VLTKHREVHV REKLLPYPPA 951 1000 ENSP00000331626/1-967 LYCPENPHKG KTDEFRKTF ENSBTAP00000014826/1-969 FCSPENPLKG KTDDFRQTL ENSTTRP00000014467/1-969 LYAPENPHKG KTDEFRQTV bmy_18213T0/1-797 ---------- --------- BACU011876/1-969 LYAPENPHKG KTDEFRQTV