KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:53 2014 Check: 00 .. Name: ENSP00000257515/1-450 Len: 511 Check: 8161 Weight: 1.00 Name: ENSBTAP00000014839/1-450 Len: 511 Check: 9218 Weight: 1.00 Name: ENSTTRP00000000881/1-450 Len: 511 Check: 9817 Weight: 1.00 Name: bmy_21089T0/1-511 Len: 511 Check: 5770 Weight: 1.00 Name: BACU009484/1-358 Len: 511 Check: 8984 Weight: 1.00 // 1 50 ENSP00000257515/1-450 ---------- ---------- -------MIL LVNLFVLLSV VCVLLNLAGF ENSBTAP00000014839/1-450 ---------- ---------- -------LLF QVNLFVLLSV VCVLLNLAGF ENSTTRP00000000881/1-450 ---------- ---------- -------MIL LVNLFVLLSV VCVLLNLAGF bmy_21089T0/1-511 MTGHIVLLQI NKKGEKQKPD SSVKNESPCS LVNLFVLLSV VCVLLNLAGF BACU009484/1-358 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000257515/1-450 ILGCQGAQFV SSVPRCDLVD LGEGKICFCC EEFQPAKCTD KENALKLFPV ENSBTAP00000014839/1-450 ILGCQGAQFV SSVPRCDLVD LGEGKICFCC EELQPAKCTD KENALKLFPV ENSTTRP00000000881/1-450 ILGCQGAQFV SSVPRCDLVD LGEGKICFCC EEFQPAKCTD KENALKLFPV bmy_21089T0/1-511 ILGCQGAQFV SSVPRCDLVD LGEGKICFCC EEFQPAKCTD KENALKLFPV BACU009484/1-358 ---------- --------VD LGEGKICFCC EEFQPAKCTD KENALKLFPV 101 150 ENSP00000257515/1-450 QPCSAVHLLL KKVLFALCAL NALTTTVCLV AAALRYLQIF ATRRSCIDES ENSBTAP00000014839/1-450 QPCSAVHLLL KKVLFTLCAL NALTTTVCLV AAALRYLQIF AARRSCVDES ENSTTRP00000000881/1-450 QPCSAVHLLL KKVLFALCAL NALTTTVCLV AAALRYLQIF AARRSCVDES bmy_21089T0/1-511 QPCSAVHLLL KKVLFALCAL NALTTTVCLV AAALRYLQIF AARRSCIDES BACU009484/1-358 QPCSAVHLLL KKVLFALCAL NALTTTVCLV AAALRYLQIF AARRSCIDES 151 200 ENSP00000257515/1-450 QISAEEAEDH GRIPDPDDFV PPVPPPSYFA TFYSCTPRMN RRMVGPDVIP ENSBTAP00000014839/1-450 QIPAEEVEEH RRVPDPDDFV PPVPPPSYFA TFYSCTPRMN RRMVGPDVIP ENSTTRP00000000881/1-450 QISAEEVEEH RRIPDPDDFV PPVPPPSYFA TFYSCTPRTN RRMVGPDVIP bmy_21089T0/1-511 QISAEEVEEH RRIPDPDDFV PPVPPPSYFA TFYSCTPRTN RRMVGPDVIP BACU009484/1-358 QISVEEVEEH RRIPDPEDFV PPVPPPSYFA TFYSCTPRTN RRMVGPDVIP 201 250 ENSP00000257515/1-450 LPHIYGARIK GVEVFCPLDP PPPYEAVVSQ MDQEQGSSFQ MSEGSEAAVI ENSBTAP00000014839/1-450 LPHIYGARIK GVEVFCPLDP PPPYEAVVSQ ADQQQGSSFQ MPEGPEVATS ENSTTRP00000000881/1-450 LPHIYGARIK GVEVFCPLDP PPPYEAVVSQ TDQQQGSSFQ MPEGSGAATS bmy_21089T0/1-511 LPHIYGARIK GVEVFCPLEP PPPYEAVVSQ TDQQQGSSFQ MPEGSEAATS BACU009484/1-358 LPHIYGARIK GVEVFCPLEP PPPYEAVVSQ TDQQQGSSFQ MPEGSEAATS 251 300 ENSP00000257515/1-450 PLDLGCTQVT QDGDIPNIPA EENASTSTPS STLVRPIRSR RALPPLRTRS ENSBTAP00000014839/1-450 PLEPICMPGI QGGDIPATPG EESASIPTPN TNQLCPARSW RALRPLRTRS ENSTTRP00000000881/1-450 PLEPICMPVI QGGDSPNTPR EEGAAISTPS SSQLCPARNR RALQPPRTRS bmy_21089T0/1-511 PLEPICMPVT QGGDIPNTPG EESASTSTPC SSQLRPARSW RALQPLRTRS BACU009484/1-358 PLEPICMPVT Q--------- ---------- ---------- ---------- 301 350 ENSP00000257515/1-450 KSDPVLHPSE ER-------- ---------- ---------- ------AAPV ENSBTAP00000014839/1-450 KSDPVLHHSA ER-------- ---------- ---------- ------AVPV ENSTTRP00000000881/1-450 KSDPVLHHSA ER-------- ---------- ---------- ------AVPV bmy_21089T0/1-511 KSDPVLHHSA EREEKQDVHG RQHLSHVQMC VHGAWPKGAC CLSLPTAVPV BACU009484/1-358 ---------- ---------- ---------- ---------- ------AVPV 351 400 ENSP00000257515/1-450 LSCEAATQTE RRLDLAAVTL RRGLRSRASR CRPRSLIDYK SYMDTKLLVA ENSBTAP00000014839/1-450 LSCEAATQTE GRLDLAAVTL RRRLRSRASR CRPRSLIDYK SYMDTKLLVA ENSTTRP00000000881/1-450 LSCEAATQTE GRPDLAAVTL RRGLRSRASR CRPRSLIDYK SYMDTKLLVA bmy_21089T0/1-511 LSCEAATQTE GRPDLAAVTL RRGLKSRASR CRPRSLIDYR SYMDTKLLVA BACU009484/1-358 LSCEAATQTE GRPDLAAVTL RRGLRSRALR CRPRSLIDYR SYMDTKLLVA 401 450 ENSP00000257515/1-450 RFLEQSSCTM TPDIHELVEN IKSVLKSDEE HMEEAITSAS FLEQIMAPLQ ENSBTAP00000014839/1-450 RFLEQSSCTM TPDIHELVEN IKSVLKSDEE HMEEAITSAS FLEQIMAPMQ ENSTTRP00000000881/1-450 RFLEQSSCSM TPDIHELVEN IKSVLKSDEE YMEEAITSAS FLEQIMGPMQ bmy_21089T0/1-511 RFLEQSSCSM TPDIHELVEN IKSVLKSDEE HMEEAITSAS FLEQIMAPMQ BACU009484/1-358 RFLEQSSCSM TPDIHELVEN IKSVLKSDEE HMEEAITSAS FLEQIMAPMQ 451 500 ENSP00000257515/1-450 PSTSRAHKLP SRRQPGLLHL QSCGDLHTFT PAGRPRAERR PRRVEAERPH ENSBTAP00000014839/1-450 PSTARALVLP SRKQPGLLHL RSCGDLSTFV PAGRPLAERR PRRAEAERPH ENSTTRP00000000881/1-450 PSTSRALVLP SRRQPGLLHL RSCGDLSTFV PAGRPRAERR PRRAEAERPH bmy_21089T0/1-511 PSTSRALVLP LRRQPGLLHL QSCGDLSTFV PVGRPRAERR PRRAEAERPH BACU009484/1-358 PSTSRALVLP SRRQPGLLHL RSCGDLSTFV PAGRPRAERR PRRAEAERPH 501 550 ENSP00000257515/1-450 SLIGVIRETV L ENSBTAP00000014839/1-450 SLIGVIRETV L ENSTTRP00000000881/1-450 SLIGVIRETV L bmy_21089T0/1-511 SLIGVIRETV L BACU009484/1-358 SLIGVIRETV L