KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:55 2014 Check: 00 .. Name: ENSP00000264344/1-1023 Len: 1027 Check: 5032 Weight: 1.00 Name: ENSBTAP00000014855/1-697 Len: 1027 Check: 2806 Weight: 1.00 Name: ENSTTRP00000015286/1-1020 Len: 1027 Check: 789 Weight: 1.00 Name: bmy_21462T0/1-576 Len: 1027 Check: 3654 Weight: 1.00 Name: BACU010621/1-664 Len: 1027 Check: 432 Weight: 1.00 // 1 50 ENSP00000264344/1-1023 MGAGALAICQ SKAAVRLKED MKKIVAVPLN EQKDFTYQKL FGVSLQELER ENSBTAP00000014855/1-697 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015286/1-1020 MGAGALTICQ SNSAVRLKED MKKIVTVPLN EQRNSTYTKL FGVSLQDLHQ bmy_21462T0/1-576 ---------- ---------- ---------- ---------- ---------- BACU010621/1-664 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000264344/1-1023 QGLTENGIPA VVWNIVEYLT QHGLTQEGLF RVNGNVKVVE QLRLKFESGV ENSBTAP00000014855/1-697 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015286/1-1020 QGLTENGVPA IVGRLVEYLT MHGLTQEGLF RVNGNVRVVE QLRWKFESGV bmy_21462T0/1-576 ---------- ---------- ---------- ---------- ---------- BACU010621/1-664 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000264344/1-1023 PVELGKDGDV CSAASLLKLF LRELPDSLIT SALQPRFIQL FQDGRNDVQE ENSBTAP00000014855/1-697 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015286/1-1020 PVELGRDGDV CAAASLLKLF LRELPEGVIT SALQPRFIQL FQDD-NDAQE bmy_21462T0/1-576 ---------- ---------- ---------- ---------- ---------- BACU010621/1-664 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000264344/1-1023 SSLRDLIKEL PDTHYCLLKY LCQFLTKVAK HHVQNRMNVH NLATVFGPNC ENSBTAP00000014855/1-697 ---------- ---------M ACEIMP---- ---------- ---------- ENSTTRP00000015286/1-1020 SSLRALIKEL PXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_21462T0/1-576 ---------- ---------- ---------- ---------- ---------- BACU010621/1-664 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000264344/1-1023 FHVPPGLEGM KEQDLCNKIM AKILENYNTL FEVEYTENDH LRCENLARLI ENSBTAP00000014855/1-697 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015286/1-1020 XXVSPGLEGM KEQDLCNKIM AKILENYNTL FEVEYVENDT QRCENRARLI bmy_21462T0/1-576 ---------- ---------- ---------- ---------- ---------- BACU010621/1-664 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000264344/1-1023 IVKEVYYKNS LPILLTRGLE RDMPKPPPKT KIPKSRSEGS IQAHRVLQPE ENSBTAP00000014855/1-697 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015286/1-1020 IVKEANCKN- --ILLTKDFV RDTQKPSPKT KIPKSRSEGS IQAHRVPQPE bmy_21462T0/1-576 ---------- ---------- ---------- ---------- ---------- BACU010621/1-664 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000264344/1-1023 LSDGIPQLSL RLSYRKACLE DMNSAEGAIS AKLVPSSQED ERPLSPFYL- ENSBTAP00000014855/1-697 ---------- ---------- ---------- ---LQSSQED ERPMSPFYLS ENSTTRP00000015286/1-1020 LSDGVPQVSL QRSQRNSCWD DMNSAEDANA VKLLSSSQED ERPMSPFYL- bmy_21462T0/1-576 ---------- -MTRSNIC-- ---------- ---------- ---------- BACU010621/1-664 ---MCDKEEE KRIRRNTNW- ---------- ---------- ---------- 351 400 ENSP00000264344/1-1023 SAHVPQVSNV SATGELLERT IRSAVEQHLF DVNNSGGQSS EDSESGTLSA ENSBTAP00000014855/1-697 SAHVSQVSSV SSTGELLERT IRSAVEQHLF DVNSSGGQSS EDSESGASSS ENSTTRP00000015286/1-1020 SAHVSQVSNV SATGELLERT IRSAVEQHLL DVNSSGGQSS EDSESGTSSA bmy_21462T0/1-576 ---------- -----LL--- ---------- ---------- ---------- BACU010621/1-664 ---------- -----LLERT IRSAVEQHLL DVNSSGGQSS EDSESGTSSA 401 450 ENSP00000264344/1-1023 SSATSARQRR RQSKEQDEVR HGRDKGLINK ENTPSGFNHL DDCILNT-QE ENSBTAP00000014855/1-697 S-STSTKQRR RQAKEQDESR HSRDVGRLNK ENIPSGFSNL DECMLNA-CE ENSTTRP00000015286/1-1020 SFSTSTKQRR RQSKEQDEVR HGSDMGLINK ENSPSGFSNL DECILNAHHE bmy_21462T0/1-576 ---------- ---------- --SDVSILKK GG-------- --CVV----- BACU010621/1-664 SFSTSTKQRR RQSEEQDEVR HGSDVGLINK ENIPSGFNNL DECILNAHHE 451 500 ENSP00000264344/1-1023 VEKVHKNTFG CAGERSKPKR QKSSTKLSEL HDNQ--DGLV NMESLNSTRS ENSBTAP00000014855/1-697 VEKLYENTSG YIGERGKPKR QKSSSRLSEL NENQ--DGLV NMENLNPTPS ENSTTRP00000015286/1-1020 VEKLHENTSG YLGERGKPKR QKSSSGLSEL SEHQ--DSLV DMESLNPTPS bmy_21462T0/1-576 ---------A YI-------- ------LPFL LGNKWFVLLQ NMESLNPTPS BACU010621/1-664 AEKLHENTSG YIGERGKPKR QKSSCKLSEL SEHQ--DSLV NMESLNPTPS 501 550 ENSP00000264344/1-1023 HERTGPDDFE WMSDERKGNE KDGGHTQHFE SPTMKIQEHP SLSDTKQQRN ENSBTAP00000014855/1-697 HERTGSDHVE LISDGSKENE KDGRQSQHLE NPTMKIQEHP SLPDSKLQRT ENSTTRP00000015286/1-1020 PERIGPDDVE LTSDGSKENE KDCRQTQHSE DPTMKIQERP SLPDSKLQRT bmy_21462T0/1-576 HERIGPDDVE LMSDGSKENE KDGRQTQHFE EPTMKIQEHP SVPDSKLQRT BACU010621/1-664 HERIGPDDVE LMSDGSKENE KDGRQTQHFE DPTMKIQEHP SVPDSKLQRT 551 600 ENSP00000264344/1-1023 QDAGDQEESF VSEVPQSDLT ALCDEKNWEE PIPAFSSWQR ENSDSDEAHL ENSBTAP00000014855/1-697 PDADDQQESF VSEVPELDLT ALCDQKSWEE PIPAFSSWQQ ESVDADEARL ENSTTRP00000015286/1-1020 PNADDQQESF VSGVPELDLT ALCDEKSWEE PTPAFSSWQQ ESVHADEARL bmy_21462T0/1-576 PNADDQQESF VSGAPELDLT ALCDEKSWEE PTPAFSSWQQ ESVRADEARL BACU010621/1-664 PSADDQQESF VSGAPELDLT ALCDEKSWEE PAPAFSSWQQ ESVRADEARL 601 650 ENSP00000264344/1-1023 SPQAGRLIRQ LLDEDSDPML SPRFYAYGQS RQYLDDTEVP PSPPNSHSFM ENSBTAP00000014855/1-697 SPQAGRLIRQ LLEEDSDPML SPRFYAYGQS RQYLDDTEMP PSPPNSHPFM ENSTTRP00000015286/1-1020 SPQAGRLIRQ LLDEDSGPML SPRFYAYGQS RQYLDDTEVP PSPPNSHPFM bmy_21462T0/1-576 SPQAGRLIRQ LLDEDSDPML SPRFYAYGQS RQYLDDTEVP PSPPNSHPFM BACU010621/1-664 SPQAGRLIRQ LLDEDSDPML SPRFYAYGQS RQYLDDTEVP PSPPNSHPFM 651 700 ENSP00000264344/1-1023 RRRSSSLGSY DDEQEDLTPA QLTRRIQSLK KKIRKFEDRF EEEKKYRPSH ENSBTAP00000014855/1-697 RRRSSSLGSY EDEQEDLTPA QLTRRIQSLK KKIRKFEDRF EEERKYRPSH ENSTTRP00000015286/1-1020 RRRSSSLGSY DDGQEDLTPA QLTRRIQSLK KKIRKFEDRF EEERKYRPSH bmy_21462T0/1-576 RRRSSSLGSY DDEQEDLTPA QLTRRIQSLK KKIRKFEDRF EEERKYKPSH BACU010621/1-664 RRRSSSLGSY DDEQEDLTPA QLTRRIQSLK KKIRKFEDRF EEERKYKPSH 701 750 ENSP00000264344/1-1023 SDKAANPEVL KWTNDLAKFR RQLKESKLKI SEEDLTPRMR QRSNTLPKSF ENSBTAP00000014855/1-697 SDKAANPEVL KWTNDLAKFR KQLKESKLKI SEEDLPPRMR QRSNTLPKSF ENSTTRP00000015286/1-1020 SDKAANPEVL KWTNDLAKFR KQLKESKLKI SEEDLSPRMR QRSNTLPKSF bmy_21462T0/1-576 SDKAANPEVL KWTNDLAKFR KQLKESKLKI SEEDLTPRIR QRSNTLPKSF BACU010621/1-664 SDKAANPEVL KWTNDLAKFR KQLKG----- -------RIR QRSNTLPKSF 751 800 ENSP00000264344/1-1023 GSQLEKEDEK KQELVDKAIK PSVEATLESI QRKLQEKRAE SSRPEDIKDM ENSBTAP00000014855/1-697 GSQLEKEDEK KQELVDKAIK PSVEATLESI QRKLQEKRAE TSRPEDIKDM ENSTTRP00000015286/1-1020 GSQLEKEDEK KQELVDKALK PSVEATLESI QRKLQEKRVE TSRPEDIKDM bmy_21462T0/1-576 GSQLEKEDEK KQELVDKALK PSVEATLESI QRKLQEKRVE TSRPEDIKDM BACU010621/1-664 GSQLEKEDEK KQELVDKALK PSVEATLESI QRKLQEKRVE TSRPEDIKDM 801 850 ENSP00000264344/1-1023 TKDQIANEKV ALQKALLYYE SIHGRPVTKN ERQVMKPLYD RYRLVKQILS ENSBTAP00000014855/1-697 TKDQIANEKV ALQKALLYYE SIHGRPVSKN ERQVMKPLYD RYRLVKQILS ENSTTRP00000015286/1-1020 TKDQIANEKV ALQKALLYYE SIHGRPVSKN ERQIMKPLYD RYRLVKQILS bmy_21462T0/1-576 TKDQIANEKV ALQKALLYYE SIHGRPVSKN ERQVMKPLYD RYRLVKQILS BACU010621/1-664 TKDQIANEKV ALQKALLYYE SIHGRPVSKN ERQVMKPLYD RYRLVKQILS 851 900 ENSP00000264344/1-1023 RANTIPIIGS PSSKRRSPLL QPIIEGETAS FFKEIKEEEE GSEDDSNVKP ENSBTAP00000014855/1-697 RASTIPIIGS PSSKRRSPLL QPIIEGETAS FFKEIKEEEE GSEDDNYTKP ENSTTRP00000015286/1-1020 RASTVPIIGS PSSKRRSPLL QPIIEGETAS FFKEIKEEEE GSEDESSTKP bmy_21462T0/1-576 RASTVPIIGS PSSKRRSPLL QPIIEGETAS FFKEIKEEEE GSEDDSSTKP BACU010621/1-664 RASTVPIIGS PSSKRRSPLL QPIIEGETAS FFKEIKEEEE GSEDDSSTKP 901 950 ENSP00000264344/1-1023 DFMVTLKTDF SARCFLDQFE DDADGFISPM DDKIPSKCSQ DTGLSNLHAA ENSBTAP00000014855/1-697 DFMVTLKTDF SARCFLDQFE DDADGFISPM DDKIPSKCSQ DTGLSNLHAA ENSTTRP00000015286/1-1020 EFTVTLKTDF SARCFLDQFE DVTDGFISPM DDKIPSKCSQ DTGLSNLHAA bmy_21462T0/1-576 DFTITLKTDF SARCFLDQFE DDTDGFISPM DDKIPSKCSQ DTGLSNLHAA BACU010621/1-664 DFTVTLKTDF SARCFLDQFE DDTDGFISPM DDKIPSKCSQ DTGLSNLHAA 951 1000 ENSP00000264344/1-1023 SIPELLEHLQ EMREEKKRIR KKLRDFEDNF FRQNGRNVQK EDRTPMAEEY ENSBTAP00000014855/1-697 SIPELLEHLQ EMREEKKRIR KKLRDFEDNF FRQNGRNVQK EDRTPMAEEY ENSTTRP00000015286/1-1020 SIPELLEHLQ EMREEKKRVR KKLRDFEDNF FRQNGRNVQK EDRTSMAEEY bmy_21462T0/1-576 SIPELLEHLQ EMRDEKKRIR KKLRDFEDNF FRQNGRNVQK EDRTPMAEEY BACU010621/1-664 SIPELLEHLQ EMRDEKKRIR KKLRDFEDNF FRQNGRNVQK EDRTPMAEEY 1001 1050 ENSP00000264344/1-1023 SEYKHIKAKL RLLEVLISKR DTDSKSM ENSBTAP00000014855/1-697 NEYKHIKAKL RLLEVLISKR DTDSKSM ENSTTRP00000015286/1-1020 NEYKHIKAKL RLLEVLISKR DTDSKSV bmy_21462T0/1-576 NEYKHIKAKL RLLEVLISKR DTDSKSV BACU010621/1-664 NEYKHIKAKL RLLEVLISKR DTDSKSV