KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:56 2014 Check: 00 .. Name: ENSBTAP00000014871/1-247 Len: 253 Check: 1602 Weight: 1.00 Name: ENSP00000313967/1-253 Len: 253 Check: 7399 Weight: 1.00 Name: ENSTTRP00000002481/1-253 Len: 253 Check: 8575 Weight: 1.00 Name: bmy_04531T0/1-238 Len: 253 Check: 1002 Weight: 1.00 Name: BACU005759/1-237 Len: 253 Check: 6371 Weight: 1.00 // 1 50 ENSBTAP00000014871/1-247 --MKTPRGSV ---LVLLLLN LLRVSWAQSN CIR-PSIPGI PGIPGKPGSD ENSP00000313967/1-253 MMMKIPWGSI PVLMLLLLLG LIDISQAQLS CTGPPAIPGI PGIPGTPGPD ENSTTRP00000002481/1-253 AMMKTPRGSV PVLLPLVLLS LLHVSRAQSG CIGHPAIPGI PGIPGAPGSD bmy_04531T0/1-238 --MKTPRGGA PVLLPLMLLS LLHASRAQSG CTGHPAIPGI PGIPGTPGSD BACU005759/1-237 ---------- ------MLLS LLHASRAQSG CTGPPAIPGI PGIPGKPGSD 51 100 ENSBTAP00000014871/1-247 GKPGTPGTKG EKGLPGLVSH LNENGEKGDP GFPGMPGKVG PKGPIGPKGV ENSP00000313967/1-253 GQPGTPGIKG EKGLPGLAGD HGEFGEKGDP GIPGNPGKVG PKGPMGPKGG ENSTTRP00000002481/1-253 GKPGTPGIKG EKGLPGLAGD HGELGEKGDP GFPGIPGKVG PKGPVGPKGA bmy_04531T0/1-238 GKPGTPGIKG EKGLPGLAGD HGELGEKGDP GFPGIPGKVG PKGPVGPKGA BACU005759/1-237 GKPGTPGIKG EKGLPGLAGD HGELGEKGDP GFPGIPGKVG PKGPVGPKGA 101 150 ENSBTAP00000014871/1-247 PGPPGVRGPK GESGDYKATQ KIAFSASRTI NHHQRQGQPI RFDHVITNAN ENSP00000313967/1-253 PGAPGAPGPK GESGDYKATQ KIAFSATRTI NVPLRRDQTI RFDHVITNMN ENSTTRP00000002481/1-253 PGPPGAHGPK GDSGDYKATQ KIAFSATRTI NSPLRRDQVI RFDHVITNTN bmy_04531T0/1-238 PGPPGVHGPK GESGDYKATQ KIAFSATRTI NSPLRRDQVI RFDHMITNTN BACU005759/1-237 PGPPGVHGPK GESGDYKATQ KIAFSATRTI NSPLRRDQVI RFDHMITNTN 151 200 ENSBTAP00000014871/1-247 ENYQARSSKF TCKVPGLYFF TYHASSRGQL CVDLMRGRAE PQKVVTFCDY ENSP00000313967/1-253 NNYEPRSGKF TCKVPGLYYF TYHASSRGNL CVNLMRGRER AQKVVTFCDY ENSTTRP00000002481/1-253 NNYEYRNGKF TCRVPGLYYF TYHASSRGNL CVNLMRGREE TQKVLTFCDY bmy_04531T0/1-238 NNYEYRNGKF TCRVPGLYYF TYHASSRGNL CINLMRGREQ TQKVLTFCDY BACU005759/1-237 NNYEYRNGKF TCRVPGLYYF TYHASSRGNL CVNLMRGREQ TQKVLTFCDY 201 250 ENSBTAP00000014871/1-247 VQNTFQVTTG SIVLKLEKDE TVFLQATEKN ALVGIEGANS IFSGFMLFPD ENSP00000313967/1-253 AYNTFQVTTG GMVLKLEQGE NVFLQATDKN SLLGMEGANS IFSGFLLFPD ENSTTRP00000002481/1-253 VYNTFQVTMG SVVLKLGLGE TVFLQATDKN ALVGIDGANS IFTGFLLFPD bmy_04531T0/1-238 VYNTFQVTTG SVVLKLELGE TVFLQATDKN AL---DKAKC ---------D BACU005759/1-237 VYNTFQVTTG SVVLKLELGE TVFLQATDKN ALVGIDGANS IFTGFLLFPD 251 300 ENSBTAP00000014871/1-247 TEA ENSP00000313967/1-253 MEA ENSTTRP00000002481/1-253 AEA bmy_04531T0/1-238 LE- BACU005759/1-237 AEV