KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:53:58 2014 Check: 00 .. Name: ENSP00000364613/1-183 Len: 360 Check: 6799 Weight: 1.00 Name: bmy_04155T0/1-360 Len: 360 Check: 9934 Weight: 1.00 Name: ENSTTRP00000000296/1-183 Len: 360 Check: 6994 Weight: 1.00 Name: ENSBTAP00000014878/1-183 Len: 360 Check: 5791 Weight: 1.00 // 1 50 ENSP00000364613/1-183 ---------- ---------- ---MTDQTYC DRLVQDTPFL TGHGRLSEQQ bmy_04155T0/1-360 MVCGSRHPLF GLSWLIPSVF SASVSEQTYC DRLVQDMPFL TGLGRLSEQQ ENSTTRP00000000296/1-183 ---------- ---------- ---MTEQTYC DRLVQDMPFL TGLGRLSEQQ ENSBTAP00000014878/1-183 ---------- ---------- ---MTEQTYC DRLVQDTPFL TSLGRLSEQQ 51 100 ENSP00000364613/1-183 VDRIILQLNR YYPQILTNKE AEKFRNPKAS LRVRLCDLLS HLQRSGERDC bmy_04155T0/1-360 VDRIILQLNR YYPQILSNKD AEKFRNPKVS LRVRLCDLLG HLQRSGERDC ENSTTRP00000000296/1-183 VDRIILQLNR YYPQILSNKD AEKFRNPKVS LRVRLCDLLG HLQRSGERDC ENSBTAP00000014878/1-183 VDRIILQLNR YYPQILSNKD AEKFRNPKLS LRVRLCDLLG HLQRSGERDC 101 150 ENSP00000364613/1-183 QEFYRALYIH AQPLHSRLPS RHALQNSDCT ELDSGSQSGE LSNRG---PM bmy_04155T0/1-360 QEFYRALYIH AQPLHSCLPS RHTLQNSDCT ELDSGTAGRE LSDRGNRLPC ENSTTRP00000000296/1-183 QEFYRALYIH AQPLHSCLPS RHALQNSDCT ELDSGTAGRE LSDRG---PV ENSBTAP00000014878/1-183 QEFYRALYIH AQPLHSCLPS RHALQNSDCT ELDSGNASCE LSDRG---PV 151 200 ENSP00000364613/1-183 SF-------- LAGLG---LA VGLALLLYC- ---------- ---------- bmy_04155T0/1-360 PFSLFPHPGL HLCLGGFSIP SRVPFLASCW TDPLRVLTGD VPAQLTPAQG ENSTTRP00000000296/1-183 AF-------- LTCLG---LA AGLALLVYC- ---------- ---------- ENSBTAP00000014878/1-183 AF-------- LTCLG---LA TGLALLIYC- ---------- ---------- 201 250 ENSP00000364613/1-183 ---------- ---------- ---------- ---------- ---------- bmy_04155T0/1-360 VSLSLEASGP LPALLGSGSC SRAFLPRTRG LPDLSRPGRR AGTPRLLLPP ENSTTRP00000000296/1-183 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014878/1-183 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000364613/1-183 ---------- ---------- ---------- ---YPP---- ---------- bmy_04155T0/1-360 RWVLPGQASA QSFPDHGAEP CRMDGGLHLR PPTCGPAWQP CGSFPAMLTL ENSTTRP00000000296/1-183 ---------- ---------- ---------- ---CPP---- ---------- ENSBTAP00000014878/1-183 ---------- ---------- ---------- ---CPP---- ---------- 301 350 ENSP00000364613/1-183 ---------- ---------- --DPKGLPGT RRVLGFSPVI IDRHVSRYLL bmy_04155T0/1-360 SRSCVGSQWQ AGPLGMGTPH HSDPKVLPGA RRVLGFSPVI VDRHVSRFLL ENSTTRP00000000296/1-183 ---------- ---------- --DPKVLPGA RRVLGFSPVI VDRHVSRFLL ENSBTAP00000014878/1-183 ---------- ---------- --DPKVLPGA RRVLGFSPVI IDRHVSRFLL 351 400 ENSP00000364613/1-183 AFLADDLGGL bmy_04155T0/1-360 TFLTDDLGGL ENSTTRP00000000296/1-183 AFLTDDLGGL ENSBTAP00000014878/1-183 AFLTDDLGGL