KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:01 2014 Check: 00 .. Name: ENSTTRP00000002734/1-558 Len: 559 Check: 6736 Weight: 1.00 Name: bmy_18212T0/1-294 Len: 559 Check: 4394 Weight: 1.00 Name: ENSP00000269195/1-559 Len: 559 Check: 9654 Weight: 1.00 Name: BACU001595/1-559 Len: 559 Check: 9362 Weight: 1.00 Name: ENSBTAP00000014882/1-559 Len: 559 Check: 9919 Weight: 1.00 // 1 50 ENSTTRP00000002734/1-558 MRKFAYCKVV LATSLIWVLL DMFLLLYFSE CNKCDEKKER GLPAGDVLEP bmy_18212T0/1-294 MREALSSK-- ---------- ---------- ---------- ----PRVLEP ENSP00000269195/1-559 MRKFAYCKVV LATSLIWVLL DMFLLLYFSE CNKCDEKKER GLPAGDVLEP BACU001595/1-559 MRKFAYCKVV LATSLIWVLL DMFLLFYFSE CNKCDEKKER GLPAGDVLEP ENSBTAP00000014882/1-559 MRKFAYCKVV LATSLIWVLL DMFLLLYFSE CNKCDEKKER GLPAGDVLEP 51 100 ENSTTRP00000002734/1-558 VQKPHEGPGE MGKPVVIPKE DQEKMKEMFK INQFNLMASE MIALNRSLPD bmy_18212T0/1-294 VQKPHEGPGE MGKPVVIPKE DQEKMKEMFK INQFNLMASE MIALNRSLPD ENSP00000269195/1-559 VQKPHEGPGE MGKPVVIPKE DQEKMKEMFK INQFNLMASE MIALNRSLPD BACU001595/1-559 VQKPHEGPGE MGKPVVIPKE DQEKMKEMFK INQFNLMASE MIALNRSLPD ENSBTAP00000014882/1-559 VQKPHEGPGE MGKPVVIPKE DQEKMKEMFK INQFNLMASE MIALNRSLPD 101 150 ENSTTRP00000002734/1-558 VRLEGCKTKV YPDNLPTTSV VIVFHNEAWS TLLRTVQSVI NRSPRHMLEE bmy_18212T0/1-294 VRLEGCKTKV YPDNLPTTSV VIVFHNEAWS TLLRTVHSVI NRSPRHMLEE ENSP00000269195/1-559 VRLEGCKTKV YPDNLPTTSV VIVFHNEAWS TLLRTVHSVI NRSPRHMIEE BACU001595/1-559 VRLEGCKTKV YPDNLPTTSV VIVFHNEAWS TLLRTVHSVI NCSPRHMLEE ENSBTAP00000014882/1-559 VRLEGCKTKV YPDNLPTTSV VIVFHNEAWS TLLRTVHSVI NRSPRHMLEE 151 200 ENSTTRP00000002734/1-558 IVLVDDASER DFLKRPLESY VKKLKVPVHV IRMEQRSGLI RARLKGAAVS bmy_18212T0/1-294 IVLVDDASER DFLKRPLESY VKKLKVPVHV IRMEQRSGLI RARLKGAAVS ENSP00000269195/1-559 IVLVDDASER DFLKRPLESY VKKLKVPVHV IRMEQRSGLI RARLKGAAVS BACU001595/1-559 IVLVDDASER DFLKRPLESY VKKLKVPVHV IRMEQRSGLI RARLKGAAVS ENSBTAP00000014882/1-559 IVLVDDASER DFLKRPLESY VKKLKVPVHV IRMEQRSGLI RARLKGAAVS 201 250 ENSTTRP00000002734/1-558 KGQVITFLDA HCECTVGWLE PLLARIKHDR KTVVCPIIDV ISDDTFEYMA bmy_18212T0/1-294 KGQVITFLDA HCECTVGWLE PLLARIKHDR KTVVCPIIDV ISDDTFEYMA ENSP00000269195/1-559 KGQVITFLDA HCECTVGWLE PLLARIKHDR RTVVCPIIDV ISDDTFEYMA BACU001595/1-559 KGQVITFLDA HCECTVGWLE PLLARIKHDR KTVVCPIIDV ISDDTFEYMA ENSBTAP00000014882/1-559 KGQVITFLDA HCECTVGWLE PLLARIKHDR KTVVCPIIDV ISDDTFEYMA 251 300 ENSTTRP00000002734/1-558 GSDMTYGGFN WKLNFRWYPV PQREMDRRKG DRTLPVRTPT MAGGLFSIDR bmy_18212T0/1-294 GSDMTYGGFN WKLNFRWYPV PQREMDRRKG DRTLPVRTPT MAGGLFSIDR ENSP00000269195/1-559 GSDMTYGGFN WKLNFRWYPV PQREMDRRKG DRTLPVRTPT MAGGLFSIDR BACU001595/1-559 GSDMTYGGFN WKLNFRWYPV PQREMDRRKG DRTLPVRTPT MAGGLFSTDR ENSBTAP00000014882/1-559 GSDMTYGGFN WKLNFRWYPV PQREMDRRKG DRTLPVRTPT MAGGLFSIDR 301 350 ENSTTRP00000002734/1-558 DYFQEIGTYD AGMDIWGGEN LEISFRIWQC GGTLEIVTCS HVGHVFRKAT bmy_18212T0/1-294 DYFQEIGTYD AGMDIWGGEN LEISFR---- ---------- ---------- ENSP00000269195/1-559 DYFQEIGTYD AGMDIWGGEN LEISFRIWQC GGTLEIVTCS HVGHVFRKAT BACU001595/1-559 DYFQEIGTYD AGMDIWGGEN LEISFRIWQC GGTLEIVTCS HVGHVFRKAT ENSBTAP00000014882/1-559 DYFQEIGTYD AGMDIWGGEN LEISFRIWQC GGTLEIVTCS HVGHVFRKAT 351 400 ENSTTRP00000002734/1-558 PYT-PGGTGQ XXXXXXXXXX XXXXXXXXXX XXXXXXXVTK VDYGDISSRL bmy_18212T0/1-294 ---------- ---------- ---------- ---------- ---------- ENSP00000269195/1-559 PYTFPGGTGQ IINKNNRRLA EVWMDEFKNF FYIISPGVTK VDYGDISSRV BACU001595/1-559 PYTFPGGTGQ IINKNNRRLA EVWMDEFKNF FYIISPGVTK VDYGDISSRL ENSBTAP00000014882/1-559 PYTFPGGTGQ IINKNNRRLA EVWMDEFKNF FYIISPGVTK VDYGDISSRL 401 450 ENSTTRP00000002734/1-558 GLRHKLQCRP FSWYLENIYP DSQIPRHYFS LGEIRNVETN QCLDNMARKE bmy_18212T0/1-294 ---------- ---------- ---------- ---------- ---------- ENSP00000269195/1-559 GLRHKLQCKP FSWYLENIYP DSQIPRHYFS LGEIRNVETN QCLDNMARKE BACU001595/1-559 GLRHKLQCRP FSWYLENIYP DSQIPRHYFS LGEIRNVETN QCLDNMARKE ENSBTAP00000014882/1-559 GLRHKLQCRP FSWYLENIYP DSQIPRHYFS LGEIRNVETN QCLDNMARKE 451 500 ENSTTRP00000002734/1-558 NEKVGIFNCH GMGGNQVFSY TANKEIRTDD LCLDVSKLNG PVTMLKCHHL bmy_18212T0/1-294 ---------- ---------- ---------- ----VSSL-- ---------- ENSP00000269195/1-559 NEKVGIFNCH GMGGNQVFSY TANKEIRTDD LCLDVSKLNG PVTMLKCHHL BACU001595/1-559 NEKVGIFNCH GMGGNQVFSY TANKEIRTDD LCLDVSKLNG PVTMLKCHHL ENSBTAP00000014882/1-559 NEKVGIFNCH GMGGNQVFSY TANKEIRTDD LCLDVSKLNG PVTMLKCHHL 501 550 ENSTTRP00000002734/1-558 KGNQLWEYDP VKLTLQHVNS NQCLDKATEE DSQVPSIRDC NGSRSQQWLL bmy_18212T0/1-294 ---------- ---------- ---------- ---------- ---------- ENSP00000269195/1-559 KGNQLWEYDP VKLTLQHVNS NQCLDKATEE DSQVPSIRDC NGSRSQQWLL BACU001595/1-559 KGNQLWEYDP VKLTLQHVNS NQCLDKATEE DSQVPSIRDC NGSRSQQWLL ENSBTAP00000014882/1-559 KGNQLWEYDP VKLTLQHVNS NQCLDKATDE DSQVPSIRDC SGSRSQQWLL 551 600 ENSTTRP00000002734/1-558 RNVTLPEIF bmy_18212T0/1-294 --------- ENSP00000269195/1-559 RNVTLPEIF BACU001595/1-559 RNVTLPEIF ENSBTAP00000014882/1-559 RNVTLPEIF