KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:54:02 2014  Check: 00 ..

 Name: ENSP00000054650/1-239     Len:    240  Check:  2915  Weight:  1.00
 Name: ENSBTAP00000014893/1-239  Len:    240  Check:  2364  Weight:  1.00
 Name: bmy_09520T0/1-210         Len:    240  Check:  5973  Weight:  1.00
 Name: ENSTTRP00000006006/1-231  Len:    240  Check:  5203  Weight:  1.00

//


                          1                                                   50
ENSP00000054650/1-239     MPKSCAARQC CNRYSSRRKQ LTFHRFPFSR PELLKEWVLN IGRGNFKPKQ 
ENSBTAP00000014893/1-239  MPKSCAARQC CNRYSNRRKQ LTFHRFPFSR PELLKEWVLN IGRGDFEPKQ 
bmy_09520T0/1-210         MPKSCAARQC CNRYSNRRKQ LTFHRFPFSR PELLKEWVLN IGRGDFEPKQ 
ENSTTRP00000006006/1-231  MPKSCAARQC CNRYSNRRKQ LTFHRFPFSR PEPLKEWVLN IGRGDFEPKQ 


                          51                                                 100
ENSP00000054650/1-239     HTVICSEHFR PECFSAFGNR KNLKHNAVPT VFAFQDPTQQ VRENTDPASE 
ENSBTAP00000014893/1-239  HTVICSEHFR PECFSAFGNR KNLKHNAVPT VFAFQGPPQL VRENTDPTGR 
bmy_09520T0/1-210         HTVICSEHFR PECFSAFGNR KNLKHNAVPT VFAFQGPSQ- ---------- 
ENSTTRP00000006006/1-231  HTVICSEHFR PECFSAFGNR KNLKHNAVPT VFAFQGPPQL VRENTDPAGP 


                          101                                                150
ENSP00000054650/1-239     RGNASSSQKE KVLPEAGAGE DSPGRNMDTA LEELQLPPNA EGHVKQVSPR 
ENSBTAP00000014893/1-239  SGDATSGER- KVLPETGSGE CGLGRKMDTT VEVLQLPPEV GGLGAQVPPH 
bmy_09520T0/1-210         ---------- -VLPETGAGE GGPGRKVDAT LEGLQLPPDA GGPGAQVPPH 
ENSTTRP00000006006/1-231  SGDAASEKG- KVLPETGAGE GGPGRKVDTM LEAPQLPPDA GGPGAQVPLH 


                          151                                                200
ENSP00000054650/1-239     RPQATEAVGR PTGPAGLRRT PNKQPSDHSY ALLDLDSLKK KLFLTLKENE 
ENSBTAP00000014893/1-239  TPETSGVPGQ PASPPELKRR LPTQPSDHSY ALLDLDTLKK KLFLTLKENE 
bmy_09520T0/1-210         RPEATGVPGQ PDSP------ --TQPSDHSY ALLDLDALKK KLFLTLKENE 
ENSTTRP00000006006/1-231  RPEATGVPGQ PASP------ --TQPSDHSY ALLDLDALKK KLFLTLKENE 


                          201                                                250
ENSP00000054650/1-239     KLRKRLQAQR LVMRRMSSRL RAC-KGHQGL QARLGPEQQS 
ENSBTAP00000014893/1-239  KLRRRLKAQR LVMRRMCSRL RARLAGRPGL QARPRLGQQS 
bmy_09520T0/1-210         KLRRRLKAQR LVMRKMSSRL RACGVGQPGL QARLWPGQQS 
ENSTTRP00000006006/1-231  KLCRRLKAQR MVMRKMSSRL RACGVGQPGL QARLWPGQQS