KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:54:03 2014 Check: 00 ..
Name: ENSP00000366800/1-559 Len: 559 Check: 7743 Weight: 1.00
Name: ENSBTAP00000014899/1-559 Len: 559 Check: 4293 Weight: 1.00
Name: bmy_09519T0/1-435 Len: 559 Check: 5157 Weight: 1.00
Name: BACU001107/1-559 Len: 559 Check: 5654 Weight: 1.00
Name: ENSTTRP00000006008/1-557 Len: 559 Check: 9829 Weight: 1.00
//
1 50
ENSP00000366800/1-559 MATALSEEEL DNEDYYSLLN VRREASSEEL KAAYRRLCML YHPDKHRDPE
ENSBTAP00000014899/1-559 MATALSEEEL DNEDYYSLLN VRREASCEEL KAAYRRLCML YHPDKHRDPE
bmy_09519T0/1-435 ---------- ---------- ---------- ---------- ----------
BACU001107/1-559 MATALSEEEL DNEDYYSLLN VRREATSEEL KAAYRRLCML YHPDKHRDPE
ENSTTRP00000006008/1-557 MATALSEEEL DNEDYYSLLN VRREASSEEL KAAYRRLCML YHPDKHRDPE
51 100
ENSP00000366800/1-559 LKSQAERLFN LVHQAYEVLS DPQTRAIYDI YGKRGLEMEG WEVVERRRTP
ENSBTAP00000014899/1-559 LKSQAERLFN LVHQAYEVLS DPQTRAIYDI YGKRGLEMEG WEVVERRRTP
bmy_09519T0/1-435 ---------- ---------- ---------- ---------- ----------
BACU001107/1-559 LKLQAERLFN LVHQAYEVLS DPQTRAIYDI YGKRGLEMEG WEVVERRRTP
ENSTTRP00000006008/1-557 LKLQAERLFN LVHQAYEVLS DPQTRAIYDI YGKRGLEMEG WEVVERRRTP
101 150
ENSP00000366800/1-559 AEIREEFERL QREREERRLQ QRTNPKGTIS VGVDATDLFD RYDEEYEDVS
ENSBTAP00000014899/1-559 AEIREEFERL QREREERRLQ QRTNPKGTIS VGIDATDLFD RYEEEYEDVS
bmy_09519T0/1-435 ---------- ---------- ----PQGTIS VGIDATDLFD RYEEEYEDVS
BACU001107/1-559 AEIREEFERL QREREERRLQ QRTNPKGTIS VGIDATDLFD RYEEEYEDVS
ENSTTRP00000006008/1-557 AEIREEFERL QREREERRLQ QRTNPKGTIS VGIDATDLFD RYEEEYEDVS
151 200
ENSP00000366800/1-559 GSSFPQIEIN KMHISQSIEA PLTATDTAIL SGSLSTQNGN GGGSINFALR
ENSBTAP00000014899/1-559 GSGFPQIEIN KMHISQSIEA PLTASDTAIL SGSLSTQNGN GGGSINFALR
bmy_09519T0/1-435 GSGFPQIEIN KMHISQSIEA PLTASDTAIL SGSLSTQNGN GGGSVNFALR
BACU001107/1-559 GSGFPQIEIN KMHISQSIEA PLTASDTAIL SGSLSTQNGN GGGSINFALR
ENSTTRP00000006008/1-557 GSGFPQIEIN KMHISQSIEA PLTASDTAIL SGSLSTQNGN GGGSINFALR
201 250
ENSP00000366800/1-559 RVTSAKGWGE LEFGAGDLQG PLFGLKLFRN LTPRCFVTTN CALQFSSRGI
ENSBTAP00000014899/1-559 RVTSAKGWGE LEFGAGDLQG PLFGLKLFRN LTPRCFVTTH CALQFSSRGI
bmy_09519T0/1-435 RVTSAKGWGE LEFGAGDLQG PLFGLKLFRN LTPRCFVTTN CALQFSSRGI
BACU001107/1-559 RVASAKGWGE LEFGAGDLQG PLFGLKLFRN LTPRCFVTTN CALQFSSRGI
ENSTTRP00000006008/1-557 RVTSAKGWGE LEFGAGDLQG PLFGLKLFRN LTPRCFVTTN CALQFSSRGI
251 300
ENSP00000366800/1-559 RPGLTTVLAR NLDKNTVGYL QWRWGIQSAM NTSIVRDTKT SHFTVALQLG
ENSBTAP00000014899/1-559 RPGLTTVLAR NLDKNTVGYL QWRWGVQSAM NTSIVRDTKT SHFTVALQLG
bmy_09519T0/1-435 RPGLTTVLAR NLDKNTVGYL QWRWGIQSAM NTSIVRDTKT SHFTVALQLG
BACU001107/1-559 RPGLTTVLAR NLDKNTVGYL QWRWGIQSAM NTSIVRDTKT SHFTVALQLG
ENSTTRP00000006008/1-557 RPGLTTVLAR NLDKNTVGYL QWRWGIQSAM NTSIVRDTKT SHFTVALQ--
301 350
ENSP00000366800/1-559 IPHSFALISY QHKFQDDDQT RVKGSLKAGF FGTVVEYGAE RKISRHSVLG
ENSBTAP00000014899/1-559 IPHSFALISY QHKFQDDDQT RVKGSLKAGF FGTVVEYGAE RKISRHSVLG
bmy_09519T0/1-435 IPHSFALISY QHKFQDDDQT RVKGSLKAGF FGTVVEYGAE RKISRHSVLG
BACU001107/1-559 IPHSFALISY QHKFQDDDQT RVKGSLKAGF FGTVVEYGAE RKISRHSVLG
ENSTTRP00000006008/1-557 IPHSFALISY QHKFQDDDQT RVKGSLKAGF FGTVVEYGAE RKISRHSVLG
351 400
ENSP00000366800/1-559 AAVSVGVPQG VSLKVKLNRA SQTYFFPIHL TDQLLPSAMF YATVGPLVVY
ENSBTAP00000014899/1-559 AAVSIGVPQG VSLKIKLNRA SQTYFFPIHL TDQLLPSAVF YATAGPLVLY
bmy_09519T0/1-435 AAVSVGVPQG VSLKVKLNRA SQTYFFPIHL TDQLLPSAVF YATVGPLVLY
BACU001107/1-559 AAVSVGVPQG VSLKVKLNRA SQTYFFPIHL TDQLLPSAVF YATVGPLVLY
ENSTTRP00000006008/1-557 AAVSVGVPQG VSLKVKLNRA SQTYFFPIHL TDQLLPSAVF YATVGPLVLY
401 450
ENSP00000366800/1-559 FAMHRLIIKP YLRAQKEKEL EKQRESAATD VLQKKQEAES AVRLMQESVR
ENSBTAP00000014899/1-559 FALHRLVIRP YLRAQKEKEL EKQRESTATD ILQKKQEAEA AVRLMQESVR
bmy_09519T0/1-435 FALHRLVIKP YLRAQKEKEL EKQRESTATN ILQKKQEAEA AVQLMQESVR
BACU001107/1-559 FALHRLVIRP YLRAQKEKEL EKQRESTATN ILQKKQEAEA AVQLMQESVR
ENSTTRP00000006008/1-557 FALHRLVIRP YLRAQKEKEL EKQRESTATD ILQKKQEAEA AVQLMQESVR
451 500
ENSP00000366800/1-559 RIIEAEESRM GLIIVNAWYG KFVNDKSRKS EKVKVIDVTV PLQCLVKDSK
ENSBTAP00000014899/1-559 RIIEAEESRM GLIIVNAWYG KFVNDKSKKS EKVKVIDVTV PLQCLVKDSK
bmy_09519T0/1-435 RIIEAEESRM GLIIVNAWYG KFVNDKSKKS EKVKVIDVTV PLQCLVKDSK
BACU001107/1-559 RIIEAEESRM GLIIVNAWYG KFVNDKSKKS EKVKVIDVTV PLQCLVKDSK
ENSTTRP00000006008/1-557 RIIEAEESRM GLIIVNAWYG KFVNDKSKKS EKVKVIDVTV PLQCLVKDSK
501 550
ENSP00000366800/1-559 LILTEASKAG LPGFYDPCVG EEKNLKVLYQ FRGVLHQVMV LDSEALRIPK
ENSBTAP00000014899/1-559 LILTEASKAG LPGFYDPCVG EEKNLKVLYQ FRGVLHQVMA LDSEALRIPK
bmy_09519T0/1-435 LILTEASKAG LPGFYDPCAG EEKNLKVLYQ FRGALHQVMV LDSETLRIPK
BACU001107/1-559 LILTEASKAG LPGFYDPCVG EEKNLKVLYQ FRGVLHQVMA LDSETLRIPK
ENSTTRP00000006008/1-557 LILTEASKAG LPGFYDPCVG EEKNLKVLYQ FRGVLHQVMA LDSETLRIPK
551 600
ENSP00000366800/1-559 QSHRIDTDG
ENSBTAP00000014899/1-559 QSHRIDTDG
bmy_09519T0/1-435 QSHRIDTDG
BACU001107/1-559 QSHRIDTDG
ENSTTRP00000006008/1-557 QSHRIDTDG