KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:06 2014 Check: 00 .. Name: ENSP00000335060/1-371 Len: 390 Check: 4641 Weight: 1.00 Name: ENSTTRP00000008302/1-369 Len: 390 Check: 7186 Weight: 1.00 Name: ENSBTAP00000014927/1-390 Len: 390 Check: 6899 Weight: 1.00 Name: bmy_07234T0/1-371 Len: 390 Check: 217 Weight: 1.00 Name: BACU000325/1-371 Len: 390 Check: 2057 Weight: 1.00 // 1 50 ENSP00000335060/1-371 MAAPALRLCH IAFHVPAGQP LARNLQRLFG FQPLASREVD GWRQLALRSG ENSTTRP00000008302/1-369 MAAPARRLCH IAFHAPAGLP LARDLQRLFG FQPMAVREAD GWRQLALRSG ENSBTAP00000014927/1-390 MAAPVRRLCH IAFHVPAGLP LARDLQRLFG FQPLAVREAD GWRQLALRSG bmy_07234T0/1-371 MAAPARRLCH IAFHVPAGLP LAQDLQRLFG FQPLAVREAD GWRQLALQSG BACU000325/1-371 MAAPARRLCH IAFHVPAGLP LAQDLQRLFG FQPLAVREAD GWRQLALRSG 51 100 ENSP00000335060/1-371 DAVFLVNEGA GSGEPLYGLD PRHAVPSATN LCFDVADAGA ATRELAALGC ENSTTRP00000008302/1-369 DAVFLVNEGA GPAEPLYG-D PHHAVPSATN LCFDVADAGA AARALAALGC ENSBTAP00000014927/1-390 DAVFLVNEGA GPGEPLYGLD PHHGIPSATN LCFDVADAGA AARGLAALGC bmy_07234T0/1-371 DAVFLVNEGA GPGEPLYGLD PHHAVPSATN LCFDVADAGA AARALAALGC BACU000325/1-371 DAVFLVNEGA GSGEPLYGLD PHHAVPSATN LCFDVADAGA AARALAALGC 101 150 ENSP00000335060/1-371 SVPVPPVRVR DAQGAATYAV VSSPAGILSL TLLERAGYRG PFLPGFRPVS ENSTTRP00000008302/1-369 SVPV-PVSVR DEQGTATYAV ISSXXXXXXX XXXXXXXXXX XXXXXXXXVP ENSBTAP00000014927/1-390 SVPVPPVSVR DEQGTATYAV VSSPAGNLSL TLLERTGFGG PFLPGFSPVP bmy_07234T0/1-371 SVPVPPVCIR DEQGAATYAV VSSPAGNLSL TLLESTGFCG PFLPGFRPVP BACU000325/1-371 SVPVPPVSIR DEQGAATYAV VSSPAGNLSL TLLERTGFCG PFLPGFRPVP 151 200 ENSP00000335060/1-371 SAPGPGWVSR VDHLTLACTP GSSPTLLRWF HDCLGFCHLP LSPGEDPELG ENSTTRP00000008302/1-369 SAPGPGWVSH VDHLTLACTP SSSPKLMRWF HDCLGFHHLP LSPGEDPELG ENSBTAP00000014927/1-390 STPGPGWFSH VDHLTLACNP SSSPKLLHWF HDCLGFHHLP LSPGEDPELG bmy_07234T0/1-371 SAPGPGWVSH VDHLTLACTP SSSPKLMRWF HDCLGFHHLP LSPGEDPELG BACU000325/1-371 SAPGPGWVSH VDHLTLACTP SSSPKLMRWF HDCLGFHHLP LSPGEDPELG 201 250 ENSP00000335060/1-371 LEMTAGFGLG GLRLTALQAQ PGSIVPTLVL AESLPGATTR QDQVEQFLAR ENSTTRP00000008302/1-369 LEVAAESGPG GLRLTALRAP TGSAVPTLVL AESLLGVTSR QDQVEQFLAR ENSBTAP00000014927/1-390 LEVAAGSGLG GLRLTALQGP VGSAVPTLVL AESLPRATSG QDQVEQFLAR bmy_07234T0/1-371 LEVAAESGRG GLRLTALQAP TGSAVPTLVL AESLLGVTSQ QDQVEQFLAR BACU000325/1-371 LEVAAESGRG GLRLTALQAP TGSAVPTLVL AESLLGVTSP QDQVEQFLAR 251 300 ENSP00000335060/1-371 HKGPGLQHVG LYTPNIVEAT EGVATAGGQF LAPPGAYYQQ PGKERQIRAA ENSTTRP00000008302/1-369 NGGPGLQHVG LYTPNIMKAT EGVVGAGGQL LTPPEAYYQQ PGKEKQILAA ENSBTAP00000014927/1-390 NRGPGLQHVG LYTPSIKEAT EGVAGAGGQL LTPPKAYYQQ PGKEEQILAA bmy_07234T0/1-371 NGGPGLQHVG LYTPNIMEAT EGVAAAGGQF LTPPEAYYQQ PGKEKQILAA BACU000325/1-371 NGGPGLQHVG LYTPNIMEAT EGVAGAGGQL LTPPEAYYQQ PGKEKQIVAA 301 350 ENSP00000335060/1-371 GHEPHLLARQ GILLDGDKGK FLLQVFTKSL FTEDTFFLEL IQRQGATGFG ENSTTRP00000008302/1-369 GLEPSLLARQ GVLLDGDRGK FLLQVFTKSL FAEDTFFLEL IQRQGATGFG ENSBTAP00000014927/1-390 GQEPNLLARQ GVLLDGDRGK FLLQVFTKSL FAEDTFFLEL IQRQGATGFG bmy_07234T0/1-371 GHEPSLLARQ GVLLDGDRGK FLLQVFTKSF FAEDTFFLEL IQRQGATGFG BACU000325/1-371 GHEPSLLARQ GVLLDGDRGK FLLQVFTKSL FAEDTFFLEL IQRQGATGFG 351 400 ENSP00000335060/1-371 QGNIRALWQS VQEQSARSQE A--------- ---------- ENSTTRP00000008302/1-369 QGNIRALWQS VQEQAARVQE A--------- ---------- ENSBTAP00000014927/1-390 QGNIRALWQS VQEQAARVQE ACKGPKLDAA GCPGALESSA bmy_07234T0/1-371 QGNIRALWQS VQEQAARVQE A--------- ---------- BACU000325/1-371 QGNIRALWQS VQEQAARVQE A--------- ----------